RNA–Protein interactions for RNA: ENST00000495090.6

SYNE1-230, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 1,907 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-230ENST00000495090 RAB31Q13636 194 aa8.03□□□□□ -1.12
SYNE1-230ENST00000495090 FBLN7Q53RD9 439 aa8.03□□□□□ -1.12
SYNE1-230ENST00000495090 ZNF766Q5HY98 468 aa8.03□□□□□ -1.12
SYNE1-230ENST00000495090 C9orf135Q5VTT2 229 aa8.03□□□□□ -1.12
SYNE1-230ENST00000495090 VASH2Q86V25 355 aa8.03□□□□□ -1.12
SYNE1-230ENST00000495090 LYG1Q8N1E2 194 aa8.03□□□□□ -1.12
SYNE1-230ENST00000495090 MUC15Q8N387 334 aa8.03□□□□□ -1.12
SYNE1-230ENST00000495090 ZNF439Q8NDP4 499 aa8.03□□□□□ -1.12
SYNE1-230ENST00000495090 PRR7Q8TB68 274 aa8.03□□□□□ -1.12
SYNE1-230ENST00000495090 COMMD5Q9GZQ3 224 aa8.03□□□□□ -1.12
SYNE1-230ENST00000495090 PPIAL4AQ9Y536 164 aa8.03□□□□□ -1.12
SYNE1-230ENST00000495090 TRAV30A0A087WSZ9 112 aa8.02□□□□□ -1.13
SYNE1-230ENST00000495090 PSPNO60542 156 aa8.02□□□□□ -1.13
SYNE1-230ENST00000495090 LINC00869P0C866 280 aa8.02□□□□□ -1.13
SYNE1-230ENST00000495090 FOXG1P55316 489 aaPredicted RBP8.02□□□□□ -1.13
SYNE1-230ENST00000495090 PRR20EP86478 221 aa8.02□□□□□ -1.13
SYNE1-230ENST00000495090 PRR20CP86479 221 aa8.02□□□□□ -1.13
SYNE1-230ENST00000495090 PRR20DP86480 221 aa8.02□□□□□ -1.13
SYNE1-230ENST00000495090 PRR20BP86481 221 aa8.02□□□□□ -1.13
SYNE1-230ENST00000495090 PRR20AP86496 221 aa8.02□□□□□ -1.13
SYNE1-230ENST00000495090 KLF5Q13887 457 aaPredicted RBP8.02□□□□□ -1.13
SYNE1-230ENST00000495090 TBR1Q16650 682 aa8.02□□□□□ -1.13
SYNE1-230ENST00000495090 RTL8BQ17RB0 113 aa8.02□□□□□ -1.13
SYNE1-230ENST00000495090 TIGITQ495A1 244 aa8.02□□□□□ -1.13
SYNE1-230ENST00000495090 TRAT1Q6PIZ9 186 aa8.02□□□□□ -1.13
SYNE1-230ENST00000495090 TEPPQ6URK8 271 aa8.02□□□□□ -1.13
SYNE1-230ENST00000495090 TUSC5Q8IXB3 177 aa8.02□□□□□ -1.13
SYNE1-230ENST00000495090 STPG3Q8N7X2 389 aa8.02□□□□□ -1.13
SYNE1-230ENST00000495090 SLC24A4Q8NFF2 622 aa8.02□□□□□ -1.13
SYNE1-230ENST00000495090 OR4F17Q8NGA8 305 aa8.02□□□□□ -1.13
SYNE1-230ENST00000495090 CORO2AQ92828 525 aa8.02□□□□□ -1.13
SYNE1-230ENST00000495090 C1orf159Q96HA4 380 aa8.02□□□□□ -1.13
SYNE1-230ENST00000495090 DEPPQ9NTK1 212 aa8.02□□□□□ -1.13
SYNE1-230ENST00000495090 BOKQ9UMX3 212 aaPredicted RBP8.02□□□□□ -1.13
SYNE1-230ENST00000495090 IZUMO1RA6ND01 250 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 C3orf80F5H4A9 247 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 H0YJW9 148 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 TNFSF15O95150 251 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 MT-CO3P00414 261 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 APCSP02743 223 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 SP1P08047 785 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 ADH4P08319 380 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 DUTP33316 252 aaKnown RBP8.01□□□□□ -1.13
SYNE1-230ENST00000495090 FOLR3P41439 243 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 RHOGP84095 191 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 PRAMEF5Q5TYX0 476 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 PRAMEF6Q5VXH4 476 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 UNQ5815/PRO19632Q6UWF5 114 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 OR4A16Q8NH70 328 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 NANOS1Q8WY41 292 aaKnown RBP8.01□□□□□ -1.13
SYNE1-230ENST00000495090 CDX2Q99626 313 aaPredicted RBP8.01□□□□□ -1.13
SYNE1-230ENST00000495090 CLEC7AQ9BXN2 247 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 SEPSECSQ9HD40 501 aaKnown RBP8.01□□□□□ -1.13
SYNE1-230ENST00000495090 HEYLQ9NQ87 328 aaPredicted RBP8.01□□□□□ -1.13
SYNE1-230ENST00000495090 TUBG2Q9NRH3 451 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 ZNHIT1O43257 154 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 HINT1P49773 126 aaPredicted RBP8.01□□□□□ -1.13
SYNE1-230ENST00000495090 ERVK-16P61578 105 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 FOXF2Q12947 444 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 LRRC10Q5BKY1 277 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 PQLC2Q6ZP29 291 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 OR8B3Q8NGG8 313 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 C18orf32Q8TCD1 76 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 COQ2Q96H96 371 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 OR8B2Q96RD0 313 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 PHF7Q9BWX1 381 aaPredicted RBP8.01□□□□□ -1.13
SYNE1-230ENST00000495090 WNT10AQ9GZT5 417 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 C1RLQ9NZP8 487 aa8.01□□□□□ -1.13
SYNE1-230ENST00000495090 IQCF6A8MYZ5 107 aa8□□□□□ -1.13
SYNE1-230ENST00000495090 KIR2DS2P43631 304 aa8□□□□□ -1.13
SYNE1-230ENST00000495090 PPOXP50336 477 aa8□□□□□ -1.13
SYNE1-230ENST00000495090 RELBQ01201 579 aa8□□□□□ -1.13
SYNE1-230ENST00000495090 KIAA1644Q3SXP7 199 aa8□□□□□ -1.13
SYNE1-230ENST00000495090 IBA57Q5T440 356 aaKnown RBP8□□□□□ -1.13
SYNE1-230ENST00000495090 SPATA31B1PQ5VZV4 182 aa8□□□□□ -1.13
SYNE1-230ENST00000495090 TMPRSS7Q7RTY8 843 aa8□□□□□ -1.13
SYNE1-230ENST00000495090 OR4C5Q8NGB2 326 aa8□□□□□ -1.13
SYNE1-230ENST00000495090 IGF2BP2-AS1Q96M15 143 aa8□□□□□ -1.13
SYNE1-230ENST00000495090 C19orf24Q9BVV8 132 aa8□□□□□ -1.13
SYNE1-230ENST00000495090 SAP30LQ9HAJ7 183 aa8□□□□□ -1.13
SYNE1-230ENST00000495090 PINLYPA6NC86 204 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 FAM181BA6NEQ2 426 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 FOXH1O75593 365 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 OR2J3O76001 311 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 CGAP01215 116 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 IGLV2-8P01709 118 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 SPINK2P20155 84 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 CEACAM8P31997 349 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-230ENST00000495090 CYB561P49447 251 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 ARG2P78540 354 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 TBC1D28Q2M2D7 210 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 FAM162BQ5T6X4 162 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 DOLPP1Q86YN1 238 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 KMT2EQ8IZD2 1858 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 SSMEM1Q8WWF3 244 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 NEUROG1Q92886 237 aa7.99□□□□□ -1.13
SYNE1-230ENST00000495090 RNASE7Q9H1E1 156 aaKnown RBP7.99□□□□□ -1.13
SYNE1-230ENST00000495090 ZNF331Q9NQX6 463 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-230ENST00000495090 TECRQ9NZ01 308 aaKnown RBP7.99□□□□□ -1.13
SYNE1-230ENST00000495090 TCF19Q9Y242 345 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms