RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 WNK1Q9H4A3 2382 aa10.54□□□□□ -0.72
COL1A1-208ENST00000494334 A0A1B0GW64 132 aa10.54□□□□□ -0.72
COL1A1-208ENST00000494334 HMX3A6NHT5 357 aa10.54□□□□□ -0.72
COL1A1-208ENST00000494334 NUDT19A8MXV4 375 aa10.54□□□□□ -0.72
COL1A1-208ENST00000494334 TEX22C9J3V5 150 aa10.54□□□□□ -0.72
COL1A1-208ENST00000494334 SERPINE2P07093 398 aa10.54□□□□□ -0.72
COL1A1-208ENST00000494334 OR9G9P0C7N8 305 aa10.54□□□□□ -0.72
COL1A1-208ENST00000494334 IL7P13232 177 aa10.54□□□□□ -0.72
COL1A1-208ENST00000494334 CD40LGP29965 261 aa10.54□□□□□ -0.72
COL1A1-208ENST00000494334 INPP1P49441 399 aa10.54□□□□□ -0.72
COL1A1-208ENST00000494334 ADAD2Q8NCV1 583 aaKnown RBP10.54□□□□□ -0.72
COL1A1-208ENST00000494334 TMEM230Q96A57 120 aa10.54□□□□□ -0.72
COL1A1-208ENST00000494334 UBE2E2Q96LR5 201 aa10.54□□□□□ -0.72
COL1A1-208ENST00000494334 FYTTD1Q96QD9 318 aaKnown RBP10.54□□□□□ -0.72
COL1A1-208ENST00000494334 NAA60Q9H7X0 242 aa10.54□□□□□ -0.72
COL1A1-208ENST00000494334 TEX13DA0A0J9YY54 714 aaPredicted RBP10.53□□□□□ -0.72
COL1A1-208ENST00000494334 CRYM-AS1A6NIL9 109 aa10.53□□□□□ -0.72
COL1A1-208ENST00000494334 CGB1A6NKQ9 187 aa10.53□□□□□ -0.72
COL1A1-208ENST00000494334 H3BUA1 57 aa10.53□□□□□ -0.72
COL1A1-208ENST00000494334 B3GALNT1O75752 331 aa10.53□□□□□ -0.72
COL1A1-208ENST00000494334 FGF2P09038 288 aa10.53□□□□□ -0.72
COL1A1-208ENST00000494334 OR5AC1P0C628 307 aa10.53□□□□□ -0.72
COL1A1-208ENST00000494334 UCP1P25874 307 aa10.53□□□□□ -0.72
COL1A1-208ENST00000494334 SLC6A1P30531 599 aa10.53□□□□□ -0.72
COL1A1-208ENST00000494334 ETV3LQ6ZN32 361 aa10.53□□□□□ -0.72
COL1A1-208ENST00000494334 TTC9CQ8N5M4 171 aa10.53□□□□□ -0.72
COL1A1-208ENST00000494334 GLYATL2Q8WU03 294 aa10.53□□□□□ -0.72
COL1A1-208ENST00000494334 SLA2Q9H6Q3 261 aa10.53□□□□□ -0.72
COL1A1-208ENST00000494334 GNB4Q9HAV0 340 aa10.53□□□□□ -0.72
COL1A1-208ENST00000494334 ZNF355PQ9NSJ1 428 aa10.53□□□□□ -0.72
COL1A1-208ENST00000494334 NSG2Q9Y328 171 aa10.53□□□□□ -0.72
COL1A1-208ENST00000494334 TEX50A0A1B0GTY4 177 aa10.52□□□□□ -0.73
COL1A1-208ENST00000494334 LINC00854A0A1B0GVQ3 168 aa10.52□□□□□ -0.73
COL1A1-208ENST00000494334 NAP1L6A6NFF2 107 aa10.52□□□□□ -0.73
COL1A1-208ENST00000494334 BRI3O95415 125 aa10.52□□□□□ -0.73
COL1A1-208ENST00000494334 PF4P02776 101 aa10.52□□□□□ -0.73
COL1A1-208ENST00000494334 OR2B8PP59922 312 aa10.52□□□□□ -0.73
COL1A1-208ENST00000494334 TRIM16LQ309B1 348 aa10.52□□□□□ -0.73
COL1A1-208ENST00000494334 C4orf3Q8WVX3 66 aa10.52□□□□□ -0.73
COL1A1-208ENST00000494334 TSC22D3Q99576 134 aa10.52□□□□□ -0.73
COL1A1-208ENST00000494334 SLC25A21Q9BQT8 299 aaPredicted RBP10.52□□□□□ -0.73
COL1A1-208ENST00000494334 COMMD5Q9GZQ3 224 aa10.52□□□□□ -0.73
COL1A1-208ENST00000494334 TMEM222Q9H0R3 208 aa10.52□□□□□ -0.73
COL1A1-208ENST00000494334 COA4Q9NYJ1 87 aa10.52□□□□□ -0.73
COL1A1-208ENST00000494334 CMYA5Q8N3K9 4069 aa10.51□□□□□ -0.73
COL1A1-208ENST00000494334 DBX1A6NMT0 343 aa10.51□□□□□ -0.73
COL1A1-208ENST00000494334 I3L521 148 aa10.51□□□□□ -0.73
COL1A1-208ENST00000494334 SNAPC5O75971 98 aa10.51□□□□□ -0.73
COL1A1-208ENST00000494334 CDS2O95674 445 aa10.51□□□□□ -0.73
COL1A1-208ENST00000494334 IGKV1-5P01602 117 aa10.51□□□□□ -0.73
COL1A1-208ENST00000494334 TRGV3P03979 118 aa10.51□□□□□ -0.73
COL1A1-208ENST00000494334 AKR1C4P17516 323 aa10.51□□□□□ -0.73
COL1A1-208ENST00000494334 MYCNOSP40205 109 aa10.51□□□□□ -0.73
COL1A1-208ENST00000494334 CCR6P51684 374 aa10.51□□□□□ -0.73
COL1A1-208ENST00000494334 TPPP2P59282 170 aa10.51□□□□□ -0.73
COL1A1-208ENST00000494334 DHODHQ02127 395 aa10.51□□□□□ -0.73
COL1A1-208ENST00000494334 DEFB136Q30KP8 78 aa10.51□□□□□ -0.73
COL1A1-208ENST00000494334 H2BFWTQ7Z2G1 175 aa10.51□□□□□ -0.73
COL1A1-208ENST00000494334 SGPP2Q8IWX5 399 aa10.51□□□□□ -0.73
COL1A1-208ENST00000494334 S100ZQ8WXG8 99 aa10.51□□□□□ -0.73
COL1A1-208ENST00000494334 GALNT14Q96FL9 552 aa10.51□□□□□ -0.73
COL1A1-208ENST00000494334 RAX2Q96IS3 184 aa10.51□□□□□ -0.73
COL1A1-208ENST00000494334 DUX3Q96PT4 197 aa10.51□□□□□ -0.73
COL1A1-208ENST00000494334 OR5B12Q96R08 314 aa10.51□□□□□ -0.73
COL1A1-208ENST00000494334 P2RX4Q99571 388 aa10.51□□□□□ -0.73
COL1A1-208ENST00000494334 C7orf50Q9BRJ6 194 aaKnown RBP10.51□□□□□ -0.73
COL1A1-208ENST00000494334 PRNDQ9UKY0 176 aa10.51□□□□□ -0.73
COL1A1-208ENST00000494334 C15orf61A6NNL5 157 aa10.5□□□□□ -0.73
COL1A1-208ENST00000494334 NPIPB5A8MRT5 1133 aa10.5□□□□□ -0.73
COL1A1-208ENST00000494334 CCL24O00175 119 aa10.5□□□□□ -0.73
COL1A1-208ENST00000494334 PLA2G10O15496 165 aa10.5□□□□□ -0.73
COL1A1-208ENST00000494334 RBMXL2O75526 392 aaKnown RBP10.5□□□□□ -0.73
COL1A1-208ENST00000494334 PRH1P02810 166 aa10.5□□□□□ -0.73
COL1A1-208ENST00000494334 CRYGCP07315 174 aa10.5□□□□□ -0.73
COL1A1-208ENST00000494334 P0C879 139 aa10.5□□□□□ -0.73
COL1A1-208ENST00000494334 AREGP15514 252 aa10.5□□□□□ -0.73
COL1A1-208ENST00000494334 SUPT4H1P63272 117 aaKnown RBP10.5□□□□□ -0.73
COL1A1-208ENST00000494334 RUNX1Q01196 453 aa10.5□□□□□ -0.73
COL1A1-208ENST00000494334 IZUMO4Q1ZYL8 232 aa10.5□□□□□ -0.73
COL1A1-208ENST00000494334 SLC25A42Q86VD7 318 aa10.5□□□□□ -0.73
COL1A1-208ENST00000494334 MRPL41Q8IXM3 137 aaKnown RBP10.5□□□□□ -0.73
COL1A1-208ENST00000494334 WFDC9Q8NEX5 89 aa10.5□□□□□ -0.73
COL1A1-208ENST00000494334 OR11H1Q8NG94 326 aa10.5□□□□□ -0.73
COL1A1-208ENST00000494334 LHFPL5Q8TAF8 219 aa10.5□□□□□ -0.73
COL1A1-208ENST00000494334 CCDC32Q9BV29 185 aa10.5□□□□□ -0.73
COL1A1-208ENST00000494334 QTRT1Q9BXR0 403 aaKnown RBP10.5□□□□□ -0.73
COL1A1-208ENST00000494334 ALX4Q9H161 411 aaPredicted RBP10.5□□□□□ -0.73
COL1A1-208ENST00000494334 NDUFA4L2Q9NRX3 87 aa10.5□□□□□ -0.73
COL1A1-208ENST00000494334 TMEM14BQ9NUH8 114 aa10.5□□□□□ -0.73
COL1A1-208ENST00000494334 KCNIP3Q9Y2W7 256 aa10.5□□□□□ -0.73
COL1A1-208ENST00000494334 OR51B2Q9Y5P1 312 aa10.5□□□□□ -0.73
COL1A1-208ENST00000494334 TRBV9A0A0B4J1U6 114 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 A0A0G2JRQ6 117 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 IGLC7A0M8Q6 106 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 CENPXA8MT69 81 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 ATG12O94817 140 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 IGHV3-11P01762 117 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 TRAPPC2P0DI81 140 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 TRAPPC2BP0DI82 140 aa10.49□□□□□ -0.73
COL1A1-208ENST00000494334 CTRB1P17538 263 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms