RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 SSTR5P35346 364 aa9.52□□□□□ -0.88
RFC4-214ENST00000494047 VDAC2P45880 294 aaPredicted RBP9.52□□□□□ -0.88
RFC4-214ENST00000494047 ERVS71-1P61550 626 aa9.52□□□□□ -0.88
RFC4-214ENST00000494047 HSPE1P61604 102 aaKnown RBP9.52□□□□□ -0.88
RFC4-214ENST00000494047 TLE1Q04724 770 aa9.52□□□□□ -0.88
RFC4-214ENST00000494047 TFF3Q07654 80 aa9.52□□□□□ -0.88
RFC4-214ENST00000494047 RNFT1Q5M7Z0 435 aa9.52□□□□□ -0.88
RFC4-214ENST00000494047 FAM71F2Q6NXP2 309 aa9.52□□□□□ -0.88
RFC4-214ENST00000494047 TREML4Q6UXN2 200 aa9.52□□□□□ -0.88
RFC4-214ENST00000494047 PQLC2Q6ZP29 291 aa9.52□□□□□ -0.88
RFC4-214ENST00000494047 C5orf24Q7Z6I8 188 aa9.52□□□□□ -0.88
RFC4-214ENST00000494047 MYPOPQ86VE0 399 aaPredicted RBP9.52□□□□□ -0.88
RFC4-214ENST00000494047 MRPL41Q8IXM3 137 aaKnown RBP9.52□□□□□ -0.88
RFC4-214ENST00000494047 ZADH2Q8N4Q0 377 aa9.52□□□□□ -0.88
RFC4-214ENST00000494047 SLC24A4Q8NFF2 622 aa9.52□□□□□ -0.88
RFC4-214ENST00000494047 SFRP2Q96HF1 295 aa9.52□□□□□ -0.88
RFC4-214ENST00000494047 OPN3Q9H1Y3 402 aaPredicted RBP9.52□□□□□ -0.88
RFC4-214ENST00000494047 PRDM13Q9H4Q3 707 aa9.52□□□□□ -0.88
RFC4-214ENST00000494047 LINC00574Q9H8X3 128 aa9.52□□□□□ -0.88
RFC4-214ENST00000494047 LSM4Q9Y4Z0 139 aaKnown RBP9.52□□□□□ -0.88
RFC4-214ENST00000494047 PXMP4Q9Y6I8 212 aa9.52□□□□□ -0.88
RFC4-214ENST00000494047 CHD3Q12873 2000 aaKnown RBP9.52□□□□□ -0.89
RFC4-214ENST00000494047 TRAV39A0A0B4J263 110 aa9.51□□□□□ -0.89
RFC4-214ENST00000494047 K7EM74 188 aa9.51□□□□□ -0.89
RFC4-214ENST00000494047 PAFAH1B2P68402 229 aa9.51□□□□□ -0.89
RFC4-214ENST00000494047 RELBQ01201 579 aa9.51□□□□□ -0.89
RFC4-214ENST00000494047 CST9LP1Q5W188 147 aa9.51□□□□□ -0.89
RFC4-214ENST00000494047 WDR73Q6P4I2 378 aa9.51□□□□□ -0.89
RFC4-214ENST00000494047 TMEM144Q7Z5S9 345 aa9.51□□□□□ -0.89
RFC4-214ENST00000494047 OR5B3Q8NH48 314 aa9.51□□□□□ -0.89
RFC4-214ENST00000494047 Q8TCH9 128 aa9.51□□□□□ -0.89
RFC4-214ENST00000494047 FAM222BQ8WU58 562 aa9.51□□□□□ -0.89
RFC4-214ENST00000494047 ZDHHC16Q969W1 377 aa9.51□□□□□ -0.89
RFC4-214ENST00000494047 SDSLQ96GA7 329 aa9.51□□□□□ -0.89
RFC4-214ENST00000494047 C5orf30Q96GV9 206 aa9.51□□□□□ -0.89
RFC4-214ENST00000494047 GGTLC1Q9BX51 225 aa9.51□□□□□ -0.89
RFC4-214ENST00000494047 QTRT1Q9BXR0 403 aaKnown RBP9.51□□□□□ -0.89
RFC4-214ENST00000494047 MRPL32Q9BYC8 188 aaKnown RBP9.51□□□□□ -0.89
RFC4-214ENST00000494047 TMEM14BQ9NUH8 114 aa9.51□□□□□ -0.89
RFC4-214ENST00000494047 TMEM140Q9NV12 185 aa9.51□□□□□ -0.89
RFC4-214ENST00000494047 CALYQ9NYX4 217 aa9.51□□□□□ -0.89
RFC4-214ENST00000494047 IL19Q9UHD0 177 aa9.51□□□□□ -0.89
RFC4-214ENST00000494047 TCF19Q9Y242 345 aa9.51□□□□□ -0.89
RFC4-214ENST00000494047 SLC25A15Q9Y619 301 aa9.51□□□□□ -0.89
RFC4-214ENST00000494047 MYO18BQ8IUG5 2567 aa9.51□□□□□ -0.89
RFC4-214ENST00000494047 GCN1Q92616 2671 aaKnown RBP9.51□□□□□ -0.89
RFC4-214ENST00000494047 IGLV3-9A0A075B6K5 115 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 IGHV1-18A0A0C4DH31 117 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 KBTBD11-OT1A0A1B0GTJ5 212 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 PRSS46E5RG02 174 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 INS-IGF2F8WCM5 200 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 BRWD1-AS2P59051 145 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 YPEL3P61236 119 aaPredicted RBP9.5□□□□□ -0.89
RFC4-214ENST00000494047 RANP62826 216 aaKnown RBP9.5□□□□□ -0.89
RFC4-214ENST00000494047 ALKBH6Q3KRA9 238 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 BTNL3Q6UXE8 466 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 DDB2Q92466 427 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 MEGF10Q96KG7 1140 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 IFI27L2Q9H2X8 130 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 DOCK7Q96N67 2140 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 NKX6-3A6NJ46 265 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 WNT9BO14905 357 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 LHBP01229 141 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 OR10J4P0C629 311 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 OR9G9P0C7N8 305 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 IRF2P14316 349 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 CEBPDP49716 269 aaPredicted RBP9.5□□□□□ -0.89
RFC4-214ENST00000494047 LOXL3P58215 753 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 PMP22Q01453 160 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 Q6ZR03 302 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 Q6ZS92 163 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 ZNF826PQ6ZT77 177 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 CXorf67Q86X51 503 aaPredicted RBP9.5□□□□□ -0.89
RFC4-214ENST00000494047 CD177Q8N6Q3 437 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 RBMXL3Q8N7X1 1067 aaKnown RBP9.5□□□□□ -0.89
RFC4-214ENST00000494047 C9orf106Q8NAJ2 232 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 OR2Z1Q8NG97 314 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 OR10G8Q8NGN5 311 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 OR4A5Q8NH83 315 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 VSTM2AQ8TAG5 236 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 CACNG8Q8WXS5 425 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 CHRDL1Q9BU40 450 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 GAL3ST2Q9H3Q3 398 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 PLEKHA3Q9HB20 300 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 RNF7Q9UBF6 113 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 DUSP13Q9UII6 198 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 TRAPPC1Q9Y5R8 145 aa9.5□□□□□ -0.89
RFC4-214ENST00000494047 IGKV1D-17A0A075B6S4 117 aa9.49□□□□□ -0.89
RFC4-214ENST00000494047 CGAP01215 116 aa9.49□□□□□ -0.89
RFC4-214ENST00000494047 CRYABP02511 175 aaKnown RBP9.49□□□□□ -0.89
RFC4-214ENST00000494047 AMBPP02760 352 aa9.49□□□□□ -0.89
RFC4-214ENST00000494047 CD55P08174 381 aa9.49□□□□□ -0.89
RFC4-214ENST00000494047 ARL14EPLP0DKL9 152 aa9.49□□□□□ -0.89
RFC4-214ENST00000494047 IL3RAP26951 378 aa9.49□□□□□ -0.89
RFC4-214ENST00000494047 TIMP3P35625 211 aa9.49□□□□□ -0.89
RFC4-214ENST00000494047 FABP6P51161 128 aa9.49□□□□□ -0.89
RFC4-214ENST00000494047 PRCDQ00LT1 54 aa9.49□□□□□ -0.89
RFC4-214ENST00000494047 MEF2CQ06413 473 aaPredicted RBP9.49□□□□□ -0.89
RFC4-214ENST00000494047 EDDM3AQ14507 147 aa9.49□□□□□ -0.89
RFC4-214ENST00000494047 Q8N7P7 452 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms