RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 TGIF2LXQ8IUE1 241 aa8.64□□□□□ -1.03
CLCN6-208ENST00000494028 ABHD12Q8N2K0 398 aa8.64□□□□□ -1.03
CLCN6-208ENST00000494028 LY6G5BQ8NDX9 201 aa8.64□□□□□ -1.03
CLCN6-208ENST00000494028 MBD3L1Q8WWY6 194 aa8.64□□□□□ -1.03
CLCN6-208ENST00000494028 TIMD4Q96H15 378 aa8.64□□□□□ -1.03
CLCN6-208ENST00000494028 NPCDR1Q9BY65 106 aa8.64□□□□□ -1.03
CLCN6-208ENST00000494028 CHODLQ9H9P2 273 aa8.64□□□□□ -1.03
CLCN6-208ENST00000494028 HEYLQ9NQ87 328 aaPredicted RBP8.64□□□□□ -1.03
CLCN6-208ENST00000494028 WASHC3Q9Y3C0 194 aa8.64□□□□□ -1.03
CLCN6-208ENST00000494028 OR51B2Q9Y5P1 312 aa8.64□□□□□ -1.03
CLCN6-208ENST00000494028 ZNF462Q96JM2 2506 aa8.64□□□□□ -1.03
CLCN6-208ENST00000494028 PPIAL4CA0A0B4J2A2 164 aa8.63□□□□□ -1.03
CLCN6-208ENST00000494028 LOC102723971A0A1B0GUV8 181 aa8.63□□□□□ -1.03
CLCN6-208ENST00000494028 MAP1LC3B2A6NCE7 125 aa8.63□□□□□ -1.03
CLCN6-208ENST00000494028 H7C2Y5 167 aa8.63□□□□□ -1.03
CLCN6-208ENST00000494028 IGLV1-47P01700 117 aa8.63□□□□□ -1.03
CLCN6-208ENST00000494028 IGLV2-23P01705 113 aa8.63□□□□□ -1.03
CLCN6-208ENST00000494028 PPIAL4GP0DN37 164 aa8.63□□□□□ -1.03
CLCN6-208ENST00000494028 RPP30P78346 268 aaKnown RBP8.63□□□□□ -1.03
CLCN6-208ENST00000494028 PRB3Q04118 309 aaPredicted RBP8.63□□□□□ -1.03
CLCN6-208ENST00000494028 ICAM4Q14773 271 aa8.63□□□□□ -1.03
CLCN6-208ENST00000494028 CLDND2Q8NHS1 167 aa8.63□□□□□ -1.03
CLCN6-208ENST00000494028 TMEM167AQ8TBQ9 72 aa8.63□□□□□ -1.03
CLCN6-208ENST00000494028 RAB1CQ92928 201 aa8.63□□□□□ -1.03
CLCN6-208ENST00000494028 CLEC7AQ9BXN2 247 aa8.63□□□□□ -1.03
CLCN6-208ENST00000494028 MAP1LC3BQ9GZQ8 125 aa8.63□□□□□ -1.03
CLCN6-208ENST00000494028 SLC25A22Q9H936 323 aa8.63□□□□□ -1.03
CLCN6-208ENST00000494028 UBTD1Q9HAC8 227 aa8.63□□□□□ -1.03
CLCN6-208ENST00000494028 PLEKHA3Q9HB20 300 aa8.63□□□□□ -1.03
CLCN6-208ENST00000494028 PATZ1Q9HBE1 687 aaKnown RBP8.63□□□□□ -1.03
CLCN6-208ENST00000494028 MALRD1Q5VYJ5 2156 aa8.63□□□□□ -1.03
CLCN6-208ENST00000494028 HRNRQ86YZ3 2850 aaPredicted RBP8.63□□□□□ -1.03
CLCN6-208ENST00000494028 A0A1W2PPH5 198 aa8.62□□□□□ -1.03
CLCN6-208ENST00000494028 RBFOX3A6NFN3 312 aa8.62□□□□□ -1.03
CLCN6-208ENST00000494028 COX7A1P24310 79 aa8.62□□□□□ -1.03
CLCN6-208ENST00000494028 CDKN1AP38936 164 aa8.62□□□□□ -1.03
CLCN6-208ENST00000494028 HNF4GQ14541 408 aa8.62□□□□□ -1.03
CLCN6-208ENST00000494028 BSXQ3C1V8 233 aa8.62□□□□□ -1.03
CLCN6-208ENST00000494028 FFAR4Q5NUL3 377 aa8.62□□□□□ -1.03
CLCN6-208ENST00000494028 CLRN3Q8NCR9 226 aa8.62□□□□□ -1.03
CLCN6-208ENST00000494028 BEND2Q8NDZ0 799 aa8.62□□□□□ -1.03
CLCN6-208ENST00000494028 OR4P4Q8NGL7 312 aa8.62□□□□□ -1.03
CLCN6-208ENST00000494028 OR5B3Q8NH48 314 aa8.62□□□□□ -1.03
CLCN6-208ENST00000494028 OR4A5Q8NH83 315 aa8.62□□□□□ -1.03
CLCN6-208ENST00000494028 SFT2D1Q8WV19 159 aa8.62□□□□□ -1.03
CLCN6-208ENST00000494028 AIFM2Q9BRQ8 373 aa8.62□□□□□ -1.03
CLCN6-208ENST00000494028 GGACTQ9BVM4 153 aa8.62□□□□□ -1.03
CLCN6-208ENST00000494028 GGTLC1Q9BX51 225 aa8.62□□□□□ -1.03
CLCN6-208ENST00000494028 EIF5A2Q9GZV4 153 aaKnown RBP8.62□□□□□ -1.03
CLCN6-208ENST00000494028 ENY2Q9NPA8 101 aa8.62□□□□□ -1.03
CLCN6-208ENST00000494028 TPSG1Q9NRR2 321 aa8.62□□□□□ -1.03
CLCN6-208ENST00000494028 TNCP24821 2201 aa8.61□□□□□ -1.03
CLCN6-208ENST00000494028 CTXND1A0A1B0GTU2 59 aa8.61□□□□□ -1.03
CLCN6-208ENST00000494028 TEX50A0A1B0GTY4 177 aa8.61□□□□□ -1.03
CLCN6-208ENST00000494028 CGB1A6NKQ9 187 aa8.61□□□□□ -1.03
CLCN6-208ENST00000494028 C17orf112F2Z3M2 114 aa8.61□□□□□ -1.03
CLCN6-208ENST00000494028 SNAPINO95295 136 aa8.61□□□□□ -1.03
CLCN6-208ENST00000494028 CA2P00918 260 aa8.61□□□□□ -1.03
CLCN6-208ENST00000494028 LIPFP07098 398 aa8.61□□□□□ -1.03
CLCN6-208ENST00000494028 SRP19P09132 144 aaKnown RBP8.61□□□□□ -1.03
CLCN6-208ENST00000494028 RNASE2P10153 161 aaKnown RBP8.61□□□□□ -1.03
CLCN6-208ENST00000494028 BCL2P10415 239 aa8.61□□□□□ -1.03
CLCN6-208ENST00000494028 USF1P22415 310 aaPredicted RBP8.61□□□□□ -1.03
CLCN6-208ENST00000494028 CD1BP29016 333 aa8.61□□□□□ -1.03
CLCN6-208ENST00000494028 FGF8P55075 233 aaPredicted RBP8.61□□□□□ -1.03
CLCN6-208ENST00000494028 RAB11AP62491 216 aa8.61□□□□□ -1.03
CLCN6-208ENST00000494028 HAGHQ16775 308 aa8.61□□□□□ -1.03
CLCN6-208ENST00000494028 ARSJQ5FYB0 599 aaPredicted RBP8.61□□□□□ -1.03
CLCN6-208ENST00000494028 C10orf55Q5SWW7 151 aa8.61□□□□□ -1.03
CLCN6-208ENST00000494028 LCN15Q6UWW0 184 aa8.61□□□□□ -1.03
CLCN6-208ENST00000494028 CBLN2Q8IUK8 224 aa8.61□□□□□ -1.03
CLCN6-208ENST00000494028 OR4C13Q8NGP0 309 aa8.61□□□□□ -1.03
CLCN6-208ENST00000494028 FLYWCH2Q96CP2 140 aaKnown RBP8.61□□□□□ -1.03
CLCN6-208ENST00000494028 MGST2Q99735 147 aa8.61□□□□□ -1.03
CLCN6-208ENST00000494028 RARRES2Q99969 163 aa8.61□□□□□ -1.03
CLCN6-208ENST00000494028 HINT2Q9BX68 163 aa8.61□□□□□ -1.03
CLCN6-208ENST00000494028 SLC35B3Q9H1N7 401 aa8.61□□□□□ -1.03
CLCN6-208ENST00000494028 SMDT1Q9H4I9 107 aa8.61□□□□□ -1.03
CLCN6-208ENST00000494028 ONECUT1Q9UBC0 465 aa8.61□□□□□ -1.03
CLCN6-208ENST00000494028 AMMECR1Q9Y4X0 333 aaPredicted RBP8.61□□□□□ -1.03
CLCN6-208ENST00000494028 A0A1W2PPI3 338 aa8.6□□□□□ -1.03
CLCN6-208ENST00000494028 SMCO3A2RU48 225 aa8.6□□□□□ -1.03
CLCN6-208ENST00000494028 FNDC10F2Z333 226 aa8.6□□□□□ -1.03
CLCN6-208ENST00000494028 INS-IGF2F8WCM5 200 aa8.6□□□□□ -1.03
CLCN6-208ENST00000494028 BUB1B-PAK6H3BSN5 160 aa8.6□□□□□ -1.03
CLCN6-208ENST00000494028 NDUFS7O75251 213 aa8.6□□□□□ -1.03
CLCN6-208ENST00000494028 MPDU1O75352 247 aa8.6□□□□□ -1.03
CLCN6-208ENST00000494028 EIF3GO75821 320 aaKnown RBP eCLIP8.6□□□□□ -1.03
CLCN6-208ENST00000494028 HSPB1P04792 205 aaKnown RBP8.6□□□□□ -1.03
CLCN6-208ENST00000494028 GPR6P46095 362 aaPredicted RBP8.6□□□□□ -1.03
CLCN6-208ENST00000494028 RPL8P62917 257 aaKnown RBP8.6□□□□□ -1.03
CLCN6-208ENST00000494028 MRGPRG-AS1Q2M3A8 158 aa8.6□□□□□ -1.03
CLCN6-208ENST00000494028 VMA21Q3ZAQ7 101 aa8.6□□□□□ -1.03
CLCN6-208ENST00000494028 AWAT1Q58HT5 328 aa8.6□□□□□ -1.03
CLCN6-208ENST00000494028 FAM122CQ6P4D5 195 aa8.6□□□□□ -1.03
CLCN6-208ENST00000494028 TREML4Q6UXN2 200 aa8.6□□□□□ -1.03
CLCN6-208ENST00000494028 RPP25LQ8N5L8 163 aaKnown RBP8.6□□□□□ -1.03
CLCN6-208ENST00000494028 OR1L8Q8NGR8 309 aa8.6□□□□□ -1.03
CLCN6-208ENST00000494028 VSTM2AQ8TAG5 236 aa8.6□□□□□ -1.03
CLCN6-208ENST00000494028 RXFP4Q8TDU9 374 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms