RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 BTF3L4Q96K17 158 aa12.94□□□□□ -0.34
CACUL1-206ENST00000493518 KLF13Q9Y2Y9 288 aaPredicted RBP12.94□□□□□ -0.34
CACUL1-206ENST00000493518 AHRRA9YTQ3 701 aa12.93□□□□□ -0.34
CACUL1-206ENST00000493518 CRYBB3P26998 211 aa12.93□□□□□ -0.34
CACUL1-206ENST00000493518 PRDX2P32119 198 aa12.93□□□□□ -0.34
CACUL1-206ENST00000493518 PSG5Q15238 335 aa12.93□□□□□ -0.34
CACUL1-206ENST00000493518 ATP6V1FQ16864 119 aa12.93□□□□□ -0.34
CACUL1-206ENST00000493518 Q8TCH9 128 aa12.93□□□□□ -0.34
CACUL1-206ENST00000493518 S1PR3Q99500 378 aa12.93□□□□□ -0.34
CACUL1-206ENST00000493518 TUBG2Q9NRH3 451 aa12.93□□□□□ -0.34
CACUL1-206ENST00000493518 RPH3ALQ9UNE2 315 aa12.93□□□□□ -0.34
CACUL1-206ENST00000493518 WIPI2Q9Y4P8 454 aa12.93□□□□□ -0.34
CACUL1-206ENST00000493518 GCGP01275 180 aa12.93□□□□□ -0.34
CACUL1-206ENST00000493518 IGFBP2P18065 325 aa12.93□□□□□ -0.34
CACUL1-206ENST00000493518 KRTCAP3Q53RY4 240 aa12.93□□□□□ -0.34
CACUL1-206ENST00000493518 OR1L6Q8NGR2 347 aa12.93□□□□□ -0.34
CACUL1-206ENST00000493518 SNRNP40Q96DI7 357 aaKnown RBP12.93□□□□□ -0.34
CACUL1-206ENST00000493518 ACY3Q96HD9 319 aa12.93□□□□□ -0.34
CACUL1-206ENST00000493518 TAAR6Q96RI8 345 aa12.93□□□□□ -0.34
CACUL1-206ENST00000493518 SSBP3Q9BWW4 388 aaPredicted RBP12.93□□□□□ -0.34
CACUL1-206ENST00000493518 MRPL18Q9H0U6 180 aaKnown RBP12.93□□□□□ -0.34
CACUL1-206ENST00000493518 TMEM140Q9NV12 185 aa12.93□□□□□ -0.34
CACUL1-206ENST00000493518 APC2O95996 2303 aa12.93□□□□□ -0.34
CACUL1-206ENST00000493518 FAM90A26D6RGX4 464 aa12.92□□□□□ -0.34
CACUL1-206ENST00000493518 NKX2-8O15522 239 aa12.92□□□□□ -0.34
CACUL1-206ENST00000493518 GGCTO75223 188 aaKnown RBP12.92□□□□□ -0.34
CACUL1-206ENST00000493518 PRR27Q6MZM9 219 aa12.92□□□□□ -0.34
CACUL1-206ENST00000493518 MIR17HGQ75NE6 70 aa12.92□□□□□ -0.34
CACUL1-206ENST00000493518 MOGAT3Q86VF5 341 aa12.92□□□□□ -0.34
CACUL1-206ENST00000493518 TGIF2LYQ8IUE0 185 aa12.92□□□□□ -0.34
CACUL1-206ENST00000493518 C11orf53Q8IXP5 236 aa12.92□□□□□ -0.34
CACUL1-206ENST00000493518 OPN3Q9H1Y3 402 aaPredicted RBP12.92□□□□□ -0.34
CACUL1-206ENST00000493518 GP6Q9HCN6 339 aa12.92□□□□□ -0.34
CACUL1-206ENST00000493518 NAT8BQ9UHF3 227 aa12.92□□□□□ -0.34
CACUL1-206ENST00000493518 RAB29O14966 203 aa12.92□□□□□ -0.34
CACUL1-206ENST00000493518 FAM19A2Q8N3H0 131 aa12.92□□□□□ -0.34
CACUL1-206ENST00000493518 PYGO2Q9BRQ0 406 aa12.92□□□□□ -0.34
CACUL1-206ENST00000493518 ENY2Q9NPA8 101 aa12.92□□□□□ -0.34
CACUL1-206ENST00000493518 TET2Q6N021 2002 aaPredicted RBP12.92□□□□□ -0.34
CACUL1-206ENST00000493518 PLAUP00749 431 aa12.92□□□□□ -0.34
CACUL1-206ENST00000493518 REG1BP48304 166 aa12.92□□□□□ -0.34
CACUL1-206ENST00000493518 AGMATQ9BSE5 352 aa12.92□□□□□ -0.34
CACUL1-206ENST00000493518 PLEKHA3Q9HB20 300 aa12.92□□□□□ -0.34
CACUL1-206ENST00000493518 ELOVL5Q9NYP7 299 aa12.92□□□□□ -0.34
CACUL1-206ENST00000493518 WDR83OSQ9Y284 106 aa12.92□□□□□ -0.34
CACUL1-206ENST00000493518 TIMM9Q9Y5J7 89 aa12.92□□□□□ -0.34
CACUL1-206ENST00000493518 CEP295Q9C0D2 2601 aa12.92□□□□□ -0.34
CACUL1-206ENST00000493518 PIGBOS1A0A0B4J2F0 54 aa12.91□□□□□ -0.34
CACUL1-206ENST00000493518 HPRT1P00492 218 aa12.91□□□□□ -0.34
CACUL1-206ENST00000493518 CECR9P0C854 216 aa12.91□□□□□ -0.34
CACUL1-206ENST00000493518 DUTP33316 252 aaKnown RBP12.91□□□□□ -0.34
CACUL1-206ENST00000493518 PRB3Q04118 309 aaPredicted RBP12.91□□□□□ -0.34
CACUL1-206ENST00000493518 PQLC2Q6ZP29 291 aa12.91□□□□□ -0.34
CACUL1-206ENST00000493518 STPG3Q8N7X2 389 aa12.91□□□□□ -0.34
CACUL1-206ENST00000493518 GGTLC1Q9BX51 225 aa12.91□□□□□ -0.34
CACUL1-206ENST00000493518 M0R143 59 aa12.91□□□□□ -0.34
CACUL1-206ENST00000493518 SRP14P37108 136 aaKnown RBP12.91□□□□□ -0.34
CACUL1-206ENST00000493518 SMIM21Q3B7S5 101 aa12.91□□□□□ -0.34
CACUL1-206ENST00000493518 C1orf229Q6ZS94 237 aaPredicted RBP12.91□□□□□ -0.34
CACUL1-206ENST00000493518 NOL4LQ96MY1 436 aaPredicted RBP12.91□□□□□ -0.34
CACUL1-206ENST00000493518 TCF19Q9Y242 345 aa12.91□□□□□ -0.34
CACUL1-206ENST00000493518 TNRC6AQ8NDV7 1962 aaKnown RBP12.91□□□□□ -0.34
CACUL1-206ENST00000493518 DYSFO75923 2080 aa12.91□□□□□ -0.34
CACUL1-206ENST00000493518 Q6ZWC4 215 aa12.9□□□□□ -0.34
CACUL1-206ENST00000493518 LINC00479Q96M42 142 aa12.9□□□□□ -0.34
CACUL1-206ENST00000493518 NPIPB11E5RHQ5 1161 aa12.9□□□□□ -0.34
CACUL1-206ENST00000493518 IL6RP08887 468 aaPredicted RBP12.9□□□□□ -0.34
CACUL1-206ENST00000493518 NUTF2P61970 127 aaKnown RBP12.9□□□□□ -0.34
CACUL1-206ENST00000493518 SUMO1P63165 101 aaKnown RBP12.9□□□□□ -0.34
CACUL1-206ENST00000493518 DBX2Q6ZNG2 339 aa12.9□□□□□ -0.34
CACUL1-206ENST00000493518 MRPL37Q9BZE1 423 aaKnown RBP12.9□□□□□ -0.34
CACUL1-206ENST00000493518 WNT10AQ9GZT5 417 aa12.9□□□□□ -0.34
CACUL1-206ENST00000493518 K7EN84 100 aa12.9□□□□□ -0.34
CACUL1-206ENST00000493518 PDE6DO43924 150 aa12.9□□□□□ -0.34
CACUL1-206ENST00000493518 IRF2P14316 349 aa12.9□□□□□ -0.34
CACUL1-206ENST00000493518 ZCCHC24Q8N2G6 241 aaKnown RBP12.9□□□□□ -0.34
CACUL1-206ENST00000493518 UHRF2Q96PU4 802 aa12.9□□□□□ -0.34
CACUL1-206ENST00000493518 ZGRF1Q86YA3 2104 aa12.89□□□□□ -0.35
CACUL1-206ENST00000493518 C2orf88Q9BSF0 95 aa12.89□□□□□ -0.35
CACUL1-206ENST00000493518 MRPS18CQ9Y3D5 142 aaKnown RBP12.89□□□□□ -0.35
CACUL1-206ENST00000493518 RELNP78509 3460 aa12.89□□□□□ -0.35
CACUL1-206ENST00000493518 ANKRD11Q6UB99 2663 aaPredicted RBP12.89□□□□□ -0.35
CACUL1-206ENST00000493518 M0R1B8 84 aa12.89□□□□□ -0.35
CACUL1-206ENST00000493518 CA2P00918 260 aa12.89□□□□□ -0.35
CACUL1-206ENST00000493518 GCHFRP30047 84 aa12.89□□□□□ -0.35
CACUL1-206ENST00000493518 SLC35E4Q6ICL7 350 aa12.89□□□□□ -0.35
CACUL1-206ENST00000493518 CXXC4Q9H2H0 198 aa12.89□□□□□ -0.35
CACUL1-206ENST00000493518 KMT2EQ8IZD2 1858 aa12.89□□□□□ -0.35
CACUL1-206ENST00000493518 MKRN2OSH3BPM6 223 aa12.88□□□□□ -0.35
CACUL1-206ENST00000493518 AMTP48728 403 aa12.88□□□□□ -0.35
CACUL1-206ENST00000493518 RPL15P61313 204 aaKnown RBP12.88□□□□□ -0.35
CACUL1-206ENST00000493518 EFNB3Q15768 340 aa12.88□□□□□ -0.35
CACUL1-206ENST00000493518 GABRA6Q16445 453 aa12.88□□□□□ -0.35
CACUL1-206ENST00000493518 ARSJQ5FYB0 599 aaPredicted RBP12.88□□□□□ -0.35
CACUL1-206ENST00000493518 RNASEH2CQ8TDP1 164 aaKnown RBP12.88□□□□□ -0.35
CACUL1-206ENST00000493518 H3BTX0 84 aa12.88□□□□□ -0.35
CACUL1-206ENST00000493518 GFRA3O60609 400 aa12.88□□□□□ -0.35
CACUL1-206ENST00000493518 TOX4O94842 621 aa12.88□□□□□ -0.35
CACUL1-206ENST00000493518 MMD2Q8IY49 270 aa12.88□□□□□ -0.35
CACUL1-206ENST00000493518 Q8N7P7 452 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms