RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 SIGLECL1Q8N7X8 197 aa17.58■□□□□ 0.4
PSPC1-204ENST00000492741 OR5R1Q8NH85 324 aa17.58■□□□□ 0.4
PSPC1-204ENST00000492741 SSMEM1Q8WWF3 244 aa17.58■□□□□ 0.4
PSPC1-204ENST00000492741 TMEM14BQ9NUH8 114 aa17.58■□□□□ 0.4
PSPC1-204ENST00000492741 CACFD1Q9UGQ2 172 aa17.58■□□□□ 0.4
PSPC1-204ENST00000492741 A6NDX4 124 aa17.57■□□□□ 0.4
PSPC1-204ENST00000492741 OR2F2O95006 317 aa17.57■□□□□ 0.4
PSPC1-204ENST00000492741 MPC2O95563 127 aa17.57■□□□□ 0.4
PSPC1-204ENST00000492741 PET100P0DJ07 73 aa17.57■□□□□ 0.4
PSPC1-204ENST00000492741 POLR2GP62487 172 aaKnown RBP eCLIP17.57■□□□□ 0.4
PSPC1-204ENST00000492741 ID3Q02535 119 aa17.57■□□□□ 0.4
PSPC1-204ENST00000492741 TNFRSF9Q07011 255 aa17.57■□□□□ 0.4
PSPC1-204ENST00000492741 TNXAQ16473 311 aa17.57■□□□□ 0.4
PSPC1-204ENST00000492741 Q5BKY6 102 aa17.57■□□□□ 0.4
PSPC1-204ENST00000492741 ZNF429Q86V71 674 aa17.57■□□□□ 0.4
PSPC1-204ENST00000492741 HINT2Q9BX68 163 aa17.57■□□□□ 0.4
PSPC1-204ENST00000492741 MOB4Q9Y3A3 225 aa17.57■□□□□ 0.4
PSPC1-204ENST00000492741 POMT1Q9Y6A1 747 aa17.57■□□□□ 0.4
PSPC1-204ENST00000492741 CEBPZOSA8MTT3 80 aa17.56■□□□□ 0.4
PSPC1-204ENST00000492741 FAM90A26D6RGX4 464 aa17.56■□□□□ 0.4
PSPC1-204ENST00000492741 HOXA3O43365 443 aaPredicted RBP17.56■□□□□ 0.4
PSPC1-204ENST00000492741 MYOD1P15172 320 aa17.56■□□□□ 0.4
PSPC1-204ENST00000492741 SPINK9Q5DT21 86 aa17.56■□□□□ 0.4
PSPC1-204ENST00000492741 Q8N9W7 124 aa17.56■□□□□ 0.4
PSPC1-204ENST00000492741 THAP6Q8TBB0 222 aa17.56■□□□□ 0.4
PSPC1-204ENST00000492741 PRDM13Q9H4Q3 707 aa17.56■□□□□ 0.4
PSPC1-204ENST00000492741 K7EPK0 472 aa17.55■□□□□ 0.4
PSPC1-204ENST00000492741 FCN1O00602 326 aa17.55■□□□□ 0.4
PSPC1-204ENST00000492741 MED6O75586 246 aa17.55■□□□□ 0.4
PSPC1-204ENST00000492741 CNIH1O95406 144 aa17.55■□□□□ 0.4
PSPC1-204ENST00000492741 SPCS3P61009 180 aa17.55■□□□□ 0.4
PSPC1-204ENST00000492741 HSPE1P61604 102 aaKnown RBP17.55■□□□□ 0.4
PSPC1-204ENST00000492741 FAM71E2Q8N5Q1 922 aa17.55■□□□□ 0.4
PSPC1-204ENST00000492741 HSPB7Q9UBY9 170 aa17.55■□□□□ 0.4
PSPC1-204ENST00000492741 ZFHX3Q15911 3703 aa17.55■□□□□ 0.4
PSPC1-204ENST00000492741 TEX50A0A1B0GTY4 177 aa17.55■□□□□ 0.4
PSPC1-204ENST00000492741 SSSCA1O60232 199 aa17.55■□□□□ 0.4
PSPC1-204ENST00000492741 CA2P00918 260 aa17.55■□□□□ 0.4
PSPC1-204ENST00000492741 FGF2P09038 288 aa17.55■□□□□ 0.4
PSPC1-204ENST00000492741 MAS1LP35410 378 aa17.55■□□□□ 0.4
PSPC1-204ENST00000492741 OR1L8Q8NGR8 309 aa17.55■□□□□ 0.4
PSPC1-204ENST00000492741 OR5B3Q8NH48 314 aa17.55■□□□□ 0.4
PSPC1-204ENST00000492741 OR52E5Q8NH55 327 aa17.55■□□□□ 0.4
PSPC1-204ENST00000492741 RBKSQ9H477 322 aa17.55■□□□□ 0.4
PSPC1-204ENST00000492741 RCL1Q9Y2P8 373 aaKnown RBP17.55■□□□□ 0.4
PSPC1-204ENST00000492741 ZNF257Q9Y2Q1 563 aa17.55■□□□□ 0.4
PSPC1-204ENST00000492741 INAFM1C9JVW0 142 aa17.54■□□□□ 0.4
PSPC1-204ENST00000492741 SYNGR2O43760 224 aa17.54■□□□□ 0.4
PSPC1-204ENST00000492741 CHST1O43916 411 aa17.54■□□□□ 0.4
PSPC1-204ENST00000492741 PVALBP20472 110 aaPredicted RBP17.54■□□□□ 0.4
PSPC1-204ENST00000492741 ZFP69Q49AA0 526 aa17.54■□□□□ 0.4
PSPC1-204ENST00000492741 ENY2Q9NPA8 101 aa17.54■□□□□ 0.4
PSPC1-204ENST00000492741 FXYD6-FXYD2A0A087WZ82 144 aa17.53■□□□□ 0.4
PSPC1-204ENST00000492741 TRAV14DV4A0A0A6YYC5 116 aa17.53■□□□□ 0.4
PSPC1-204ENST00000492741 L7N2F9 121 aa17.53■□□□□ 0.4
PSPC1-204ENST00000492741 VAMP2P63027 116 aa17.53■□□□□ 0.4
PSPC1-204ENST00000492741 MRGPRG-AS1Q2M3A8 158 aa17.53■□□□□ 0.4
PSPC1-204ENST00000492741 AARDQ4LEZ3 155 aa17.53■□□□□ 0.4
PSPC1-204ENST00000492741 C11orf87Q6NUJ2 197 aa17.53■□□□□ 0.4
PSPC1-204ENST00000492741 NAV3Q8IVL0 2385 aa17.53■□□□□ 0.4
PSPC1-204ENST00000492741 FGF16O43320 207 aa17.52■□□□□ 0.4
PSPC1-204ENST00000492741 DEDDO75618 318 aa17.52■□□□□ 0.4
PSPC1-204ENST00000492741 IAPPP10997 89 aa17.52■□□□□ 0.4
PSPC1-204ENST00000492741 HOXA1P49639 335 aaPredicted RBP17.52■□□□□ 0.4
PSPC1-204ENST00000492741 C10orf55Q5SWW7 151 aa17.52■□□□□ 0.4
PSPC1-204ENST00000492741 C16orf82Q7Z2V1 217 aa17.52■□□□□ 0.4
PSPC1-204ENST00000492741 C5orf56Q8N8D9 126 aa17.52■□□□□ 0.4
PSPC1-204ENST00000492741 OR5AC2Q9NZP5 309 aa17.52■□□□□ 0.4
PSPC1-204ENST00000492741 MBD2Q9UBB5 411 aa17.52■□□□□ 0.4
PSPC1-204ENST00000492741 VPREB3Q9UKI3 123 aa17.52■□□□□ 0.4
PSPC1-204ENST00000492741 SONP18583 2426 aaKnown RBP17.52■□□□□ 0.4
PSPC1-204ENST00000492741 M0QZK8 103 aa17.52■□□□□ 0.39
PSPC1-204ENST00000492741 C1QBP02746 253 aa17.52■□□□□ 0.39
PSPC1-204ENST00000492741 HNRNPCP07910 306 aaKnown RBP eCLIP17.52■□□□□ 0.391e-7■■□□□ 14
PSPC1-204ENST00000492741 RPL27AP46776 148 aaKnown RBP17.52■□□□□ 0.39
PSPC1-204ENST00000492741 PRSS54Q6PEW0 395 aa17.52■□□□□ 0.39
PSPC1-204ENST00000492741 DTD1Q8TEA8 209 aa17.52■□□□□ 0.39
PSPC1-204ENST00000492741 DUX5Q96PT3 197 aa17.52■□□□□ 0.39
PSPC1-204ENST00000492741 HIVEP2P31629 2446 aa17.51■□□□□ 0.39
PSPC1-204ENST00000492741 H0YIZ8 118 aa17.51■□□□□ 0.39
PSPC1-204ENST00000492741 COMPP49747 757 aaPredicted RBP17.51■□□□□ 0.39
PSPC1-204ENST00000492741 FXYD3Q14802 87 aa17.51■□□□□ 0.39
PSPC1-204ENST00000492741 ABHD5Q8WTS1 349 aa17.51■□□□□ 0.39
PSPC1-204ENST00000492741 DCUN1D4Q92564 292 aa17.51■□□□□ 0.39
PSPC1-204ENST00000492741 RAB40CQ96S21 281 aa17.51■□□□□ 0.39
PSPC1-204ENST00000492741 RNF126Q9BV68 326 aa17.51■□□□□ 0.39
PSPC1-204ENST00000492741 HIPK2Q9H2X6 1198 aa17.51■□□□□ 0.39
PSPC1-204ENST00000492741 PLEKHA3Q9HB20 300 aa17.51■□□□□ 0.39
PSPC1-204ENST00000492741 G3V3Q6 166 aa17.5■□□□□ 0.39
PSPC1-204ENST00000492741 PRCDQ00LT1 54 aa17.5■□□□□ 0.39
PSPC1-204ENST00000492741 C9orf152Q5JTZ5 239 aa17.5■□□□□ 0.39
PSPC1-204ENST00000492741 ZNF562Q6V9R5 426 aa17.5■□□□□ 0.39
PSPC1-204ENST00000492741 HEYLQ9NQ87 328 aaPredicted RBP17.5■□□□□ 0.39
PSPC1-204ENST00000492741 NDUFA4L2Q9NRX3 87 aa17.5■□□□□ 0.39
PSPC1-204ENST00000492741 SH2D7A6NKC9 451 aaPredicted RBP17.5■□□□□ 0.39
PSPC1-204ENST00000492741 E5RGE8 158 aa17.5■□□□□ 0.39
PSPC1-204ENST00000492741 E7EUB6 86 aa17.5■□□□□ 0.39
PSPC1-204ENST00000492741 HLA-DRB1P01911 266 aa17.5■□□□□ 0.39
PSPC1-204ENST00000492741 CX3CL1P78423 397 aa17.5■□□□□ 0.39
PSPC1-204ENST00000492741 PDLIM3Q53GG5 364 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms