RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 PAN3Q58A45 887 aaKnown RBP5.61□□□□□ -1.51
EXOSC3-206ENST00000489414 CXorf66Q5JRM2 361 aaPredicted RBP5.61□□□□□ -1.51
EXOSC3-206ENST00000489414 TEX36Q5VZQ5 186 aa5.61□□□□□ -1.51
EXOSC3-206ENST00000489414 ACOT7LQ6ZUV0 252 aa5.61□□□□□ -1.51
EXOSC3-206ENST00000489414 SLC51BQ86UW2 128 aa5.61□□□□□ -1.51
EXOSC3-206ENST00000489414 BATF2Q8N1L9 274 aa5.61□□□□□ -1.51
EXOSC3-206ENST00000489414 SUMF2Q8NBJ7 301 aa5.61□□□□□ -1.51
EXOSC3-206ENST00000489414 PPP1R1CQ8WVI7 109 aa5.61□□□□□ -1.51
EXOSC3-206ENST00000489414 H1FXQ92522 213 aaKnown RBP5.61□□□□□ -1.51
EXOSC3-206ENST00000489414 MOB3AQ96BX8 217 aa5.61□□□□□ -1.51
EXOSC3-206ENST00000489414 SEC22AQ96IW7 307 aa5.61□□□□□ -1.51
EXOSC3-206ENST00000489414 RBM14Q96PK6 669 aaKnown RBP5.61□□□□□ -1.51
EXOSC3-206ENST00000489414 WDR13Q9H1Z4 485 aa5.61□□□□□ -1.51
EXOSC3-206ENST00000489414 IFT22Q9H7X7 185 aa5.61□□□□□ -1.51
EXOSC3-206ENST00000489414 Q9N2K0 584 aa5.61□□□□□ -1.51
EXOSC3-206ENST00000489414 FAM212BQ9NTI7 297 aaPredicted RBP5.61□□□□□ -1.51
EXOSC3-206ENST00000489414 UFSP2Q9NUQ7 469 aa5.61□□□□□ -1.51
EXOSC3-206ENST00000489414 RDH8Q9NYR8 311 aa5.61□□□□□ -1.51
EXOSC3-206ENST00000489414 RCC2Q9P258 522 aaKnown RBP5.61□□□□□ -1.51
EXOSC3-206ENST00000489414 FBXL7Q9UJT9 491 aa5.61□□□□□ -1.51
EXOSC3-206ENST00000489414 IGKV1D-8A0A087WSZ0 117 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 TRBV6-6A0A0A6YYG2 114 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 ODF3BA8MYP8 253 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 I3L521 148 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 HSPB6O14558 160 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 BET1O15155 118 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 NDUFB3O43676 98 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 MPC2O95563 127 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 NAPSAO96009 420 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 PPYP01298 95 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 DUSP1P28562 367 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 EIF5AP63241 154 aaKnown RBP5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 FOXE3Q13461 319 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 SMIM21Q3B7S5 101 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 FAM76BQ5HYJ3 339 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 PRAMEF6Q5VXH4 476 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 Q6ZRM9 215 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 CMTM1Q8IZ96 169 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 LGI3Q8N145 548 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 STPG2Q8N412 459 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 KCNRGQ8N5I3 272 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 POC1AQ8NBT0 407 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 OR4A4PQ8NGN8 299 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 OR10J5Q8NHC4 309 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 RTN4IP1Q8WWV3 396 aaPredicted RBP5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 TMEM230Q96A57 120 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 GALNT14Q96FL9 552 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 KIRREL1Q96J84 757 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 OR4C12Q96R67 309 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 CCL13Q99616 98 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 FGF23Q9GZV9 251 aaPredicted RBP5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 NAA60Q9H7X0 242 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 ZC4H2Q9NQZ6 224 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 RASL12Q9NYN1 266 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 KCNIP1Q9NZI2 227 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 TRAPPC2LQ9UL33 140 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 FBXO7Q9Y3I1 522 aa5.6□□□□□ -1.51
EXOSC3-206ENST00000489414 IGLV2-18A0A075B6J9 118 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 IGHV3OR15-7A0A075B7D8 119 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 TRAV14DV4A0A0A6YYC5 116 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 hCG_1807616A0A1W2PRN6 198 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 M0QZK8 103 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 GPR31O00270 319 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 CDIPTO14735 213 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 BCL2L11O43521 198 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 B3GALNT1O75752 331 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 OXTP01178 125 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 HOXB5P09067 269 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 AADACP22760 399 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 CD200P41217 278 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 KCNJ3P48549 501 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 NANOS2P60321 138 aaKnown RBP5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 S100A10P60903 97 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 SUPT4H1P63272 117 aaKnown RBP5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 HLA-DRB3P79483 266 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 RUNX1Q01196 453 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 ATXN7L3Q14CW9 347 aaPredicted RBP5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 IAH1Q2TAA2 248 aaPredicted RBP5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 ANKRD55Q3KP44 614 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 PHLDA2Q53GA4 152 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 LRRC10Q5BKY1 277 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 CLLU1Q5K131 121 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 ZNF660Q6AZW8 331 aaPredicted RBP5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 SCARB1Q8WTV0 552 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 SECTM1Q8WVN6 248 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 ZNF488Q96MN9 340 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 SPIN2AQ99865 258 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 SPIN2BQ9BPZ2 258 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 NRIP2Q9BQI9 281 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 RSRP1Q9BUV0 290 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 ZNF471Q9BX82 626 aaPredicted RBP5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 SLC5A7Q9GZV3 580 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 SLC2A9Q9NRM0 540 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 GSKIPQ9P0R6 139 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 ZNF581Q9P0T4 197 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 MBD2Q9UBB5 411 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 PFDN2Q9UHV9 154 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 KIF25Q9UIL4 384 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 TNFSF18Q9UNG2 199 aa5.59□□□□□ -1.51
EXOSC3-206ENST00000489414 UBE2J1Q9Y385 318 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms