RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 ERVS71-1P61550 626 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 SNRPD2P62316 118 aaKnown RBP1.35□□□□□ -2.19
RFC4-213ENST00000489028 CDK10Q15131 360 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 GUK1Q16774 197 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 LPCAT3Q6P1A2 487 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 Q6ZS49 121 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 SLC35E3Q7Z769 313 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 SLC35F6Q8N357 371 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 ANKRD29Q8N6D5 301 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 DNAJC30Q96LL9 226 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 PPP1R2P1Q96PQ5 205 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 KLF6Q99612 283 aaPredicted RBP1.35□□□□□ -2.19
RFC4-213ENST00000489028 CCDC94Q9BW85 323 aaPredicted RBP1.35□□□□□ -2.19
RFC4-213ENST00000489028 TTTY13Q9BZ97 58 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 TLNRD1Q9H1K6 362 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 DCSTAMPQ9H295 470 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 PAQR5Q9NXK6 330 aaPredicted RBP1.35□□□□□ -2.19
RFC4-213ENST00000489028 MRPL27Q9P0M9 148 aaKnown RBP1.35□□□□□ -2.19
RFC4-213ENST00000489028 TIMM9Q9Y5J7 89 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 CHD5Q8TDI0 1954 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 NAV1Q8NEY1 1877 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 LCTP09848 1927 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 A0A087WUJ7 227 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 MUC21A0A0G2JKD1 596 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 A0A0J9YY10 115 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 MUC21A0A140T8X8 626 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 A0A1B0GX78 115 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 OR4C46A6NHA9 309 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 FNDC10F2Z333 226 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 J3QRE1 110 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 KLRC4O43908 158 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 NSA2O95478 260 aaKnown RBP1.34□□□□□ -2.19
RFC4-213ENST00000489028 C1QAP02745 245 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 SERPINA7P05543 415 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 BPGMP07738 259 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 RPL5P46777 297 aaKnown RBP1.34□□□□□ -2.19
RFC4-213ENST00000489028 HINT1P49773 126 aaPredicted RBP1.34□□□□□ -2.19
RFC4-213ENST00000489028 HIST1H4AP62805 103 aaKnown RBP1.34□□□□□ -2.19
RFC4-213ENST00000489028 ZNF90Q03938 601 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 IAH1Q2TAA2 248 aaPredicted RBP1.34□□□□□ -2.19
RFC4-213ENST00000489028 AGTRAPQ6RW13 159 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 LYZL1Q6UWQ5 148 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 OR6V1Q8N148 313 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 ZNF283Q8N7M2 679 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 MRPL30Q8TCC3 161 aaKnown RBP1.34□□□□□ -2.19
RFC4-213ENST00000489028 Q9BRP9 147 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 KIFC1Q9BW19 673 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 WDR61Q9GZS3 305 aaKnown RBP1.34□□□□□ -2.19
RFC4-213ENST00000489028 EFCAB1Q9HAE3 211 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 NMNAT1Q9HAN9 279 aaPredicted RBP1.34□□□□□ -2.19
RFC4-213ENST00000489028 CMTM6Q9NX76 183 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 HHLA3Q9XRX5 114 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 FUT9Q9Y231 359 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 PKIGQ9Y2B9 76 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 PRELID3BQ9Y3B1 194 aa1.34□□□□□ -2.19
RFC4-213ENST00000489028 SHANK3Q9BYB0 1731 aa1.34□□□□□ -2.2
RFC4-213ENST00000489028 ZFYVE9O95405 1425 aa1.33□□□□□ -2.2
RFC4-213ENST00000489028 TRAV41A0A0B4J266 112 aa1.33□□□□□ -2.2
RFC4-213ENST00000489028 TRGV4A0A0C4DH28 118 aa1.33□□□□□ -2.2
RFC4-213ENST00000489028 IRGMA1A4Y4 181 aa1.33□□□□□ -2.2
RFC4-213ENST00000489028 LY6LH3BQJ8 138 aa1.33□□□□□ -2.2
RFC4-213ENST00000489028 LEPROTO15243 131 aa1.33□□□□□ -2.2
RFC4-213ENST00000489028 CNIH1O95406 144 aa1.33□□□□□ -2.2
RFC4-213ENST00000489028 CRYZL1O95825 349 aa1.33□□□□□ -2.2
RFC4-213ENST00000489028 MSNP26038 577 aaKnown RBP1.33□□□□□ -2.2
RFC4-213ENST00000489028 CCR2P41597 374 aa1.33□□□□□ -2.2
RFC4-213ENST00000489028 ARF6P62330 175 aa1.33□□□□□ -2.2
RFC4-213ENST00000489028 FOXF1Q12946 379 aa1.33□□□□□ -2.2
RFC4-213ENST00000489028 C9orf64Q5T6V5 341 aa1.33□□□□□ -2.2
RFC4-213ENST00000489028 ZNF705AQ6ZN79 300 aaPredicted RBP1.33□□□□□ -2.2
RFC4-213ENST00000489028 OR4X2Q8NGF9 303 aa1.33□□□□□ -2.2
RFC4-213ENST00000489028 MCFD2Q8NI22 146 aa1.33□□□□□ -2.2
RFC4-213ENST00000489028 PHOSPHO2Q8TCD6 241 aa1.33□□□□□ -2.2
RFC4-213ENST00000489028 SLC7A6Q92536 515 aa1.33□□□□□ -2.2
RFC4-213ENST00000489028 ERMAPQ96PL5 475 aaPredicted RBP1.33□□□□□ -2.2
RFC4-213ENST00000489028 IMMP2LQ96T52 175 aa1.33□□□□□ -2.2
RFC4-213ENST00000489028 IL36BQ9NZH7 164 aa1.33□□□□□ -2.2
RFC4-213ENST00000489028 TMEM56-RWDD3S4R434 201 aa1.33□□□□□ -2.2
RFC4-213ENST00000489028 DSCAMO60469 2012 aa1.33□□□□□ -2.2
RFC4-213ENST00000489028 NUP155O75694 1391 aa1.33□□□□□ -2.2
RFC4-213ENST00000489028 MTUS2Q5JR59 1369 aa1.33□□□□□ -2.2
RFC4-213ENST00000489028 WRNQ14191 1432 aaPredicted RBP eCLIP1.32□□□□□ -2.2
RFC4-213ENST00000489028 ADGRL3Q9HAR2 1447 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 SORL1Q92673 2214 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 FBN3Q75N90 2809 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 IGHV3-64A0A075B6Q5 118 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 TRAV26-2A0A0B4J265 109 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 hADV38S2A0JD32 116 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 C3orf84H3BNL1 204 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 FAAHO00519 579 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 PIRO00625 290 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 ZNF189O75820 626 aaPredicted RBP1.32□□□□□ -2.2
RFC4-213ENST00000489028 OR2B3O76000 313 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 SERPINA1P01009 418 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 PRM2P04554 102 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 MSMBP08118 114 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 TFPTP0C1Z6 253 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 HIST1H2BOP23527 126 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 HIST1H2BBP33778 126 aa1.32□□□□□ -2.2
RFC4-213ENST00000489028 CAPZBP47756 277 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms