RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 C19orf35Q6ZS72 473 aa12.25□□□□□ -0.45
CTDSP1-209ENST00000488627 CADM3Q8N126 398 aa12.25□□□□□ -0.45
CTDSP1-209ENST00000488627 TMEM229BQ8NBD8 167 aa12.25□□□□□ -0.45
CTDSP1-209ENST00000488627 DIRAS2Q96HU8 199 aa12.25□□□□□ -0.45
CTDSP1-209ENST00000488627 FYTTD1Q96QD9 318 aaKnown RBP12.25□□□□□ -0.45
CTDSP1-209ENST00000488627 RANGRFQ9HD47 186 aaPredicted RBP12.25□□□□□ -0.45
CTDSP1-209ENST00000488627 TMEM140Q9NV12 185 aa12.25□□□□□ -0.45
CTDSP1-209ENST00000488627 KLK9Q9UKQ9 250 aa12.25□□□□□ -0.45
CTDSP1-209ENST00000488627 ANKRD34BA5PLL1 514 aa12.24□□□□□ -0.45
CTDSP1-209ENST00000488627 CTDSPLO15194 276 aa12.24□□□□□ -0.45
CTDSP1-209ENST00000488627 AREGP15514 252 aa12.24□□□□□ -0.45
CTDSP1-209ENST00000488627 RPA2P15927 270 aa12.24□□□□□ -0.45
CTDSP1-209ENST00000488627 INSL3P51460 131 aa12.24□□□□□ -0.45
CTDSP1-209ENST00000488627 MRPS10P82664 201 aaKnown RBP12.24□□□□□ -0.45
CTDSP1-209ENST00000488627 SSBP1Q04837 148 aaKnown RBP12.24□□□□□ -0.45
CTDSP1-209ENST00000488627 TBC1D26Q86UD7 250 aa12.24□□□□□ -0.45
CTDSP1-209ENST00000488627 SLC25A42Q86VD7 318 aa12.24□□□□□ -0.45
CTDSP1-209ENST00000488627 SLC38A6Q8IZM9 456 aa12.24□□□□□ -0.45
CTDSP1-209ENST00000488627 ARRDC1Q8N5I2 433 aa12.24□□□□□ -0.45
CTDSP1-209ENST00000488627 SMIM4Q8WVI0 70 aa12.24□□□□□ -0.45
CTDSP1-209ENST00000488627 FANCD2OSQ96PS1 177 aa12.24□□□□□ -0.45
CTDSP1-209ENST00000488627 RBM38Q9H0Z9 239 aaKnown RBP12.24□□□□□ -0.45
CTDSP1-209ENST00000488627 FAM212BQ9NTI7 297 aaPredicted RBP12.24□□□□□ -0.45
CTDSP1-209ENST00000488627 ZNF257Q9Y2Q1 563 aa12.24□□□□□ -0.45
CTDSP1-209ENST00000488627 FAM223BA6NKX1 122 aa12.23□□□□□ -0.45
CTDSP1-209ENST00000488627 MARCH11A6NNE9 402 aa12.23□□□□□ -0.45
CTDSP1-209ENST00000488627 NOL3O60936 208 aaKnown RBP12.23□□□□□ -0.45
CTDSP1-209ENST00000488627 KRASP01116 189 aa12.23□□□□□ -0.45
CTDSP1-209ENST00000488627 IFNA6P05013 189 aa12.23□□□□□ -0.45
CTDSP1-209ENST00000488627 CTRB1P17538 263 aa12.23□□□□□ -0.45
CTDSP1-209ENST00000488627 PSMB6P28072 239 aa12.23□□□□□ -0.45
CTDSP1-209ENST00000488627 TNFSF8P32971 234 aa12.23□□□□□ -0.45
CTDSP1-209ENST00000488627 KLF5Q13887 457 aaPredicted RBP12.23□□□□□ -0.45
CTDSP1-209ENST00000488627 CTRB2Q6GPI1 263 aa12.23□□□□□ -0.45
CTDSP1-209ENST00000488627 ACSM6Q6P461 480 aa12.23□□□□□ -0.45
CTDSP1-209ENST00000488627 FAM223AQ8IWN6 122 aa12.23□□□□□ -0.45
CTDSP1-209ENST00000488627 DMBX1Q8NFW5 382 aa12.23□□□□□ -0.45
CTDSP1-209ENST00000488627 MRGPRFQ96AM1 343 aa12.23□□□□□ -0.45
CTDSP1-209ENST00000488627 C6orf62Q9GZU0 229 aaPredicted RBP12.23□□□□□ -0.45
CTDSP1-209ENST00000488627 PEF1Q9UBV8 284 aaKnown RBP12.23□□□□□ -0.45
CTDSP1-209ENST00000488627 ZMAT5Q9UDW3 170 aaKnown RBP12.23□□□□□ -0.45
CTDSP1-209ENST00000488627 IGLC7A0M8Q6 106 aa12.22□□□□□ -0.45
CTDSP1-209ENST00000488627 OR2J3O76001 311 aa12.22□□□□□ -0.45
CTDSP1-209ENST00000488627 RAB3DO95716 219 aa12.22□□□□□ -0.45
CTDSP1-209ENST00000488627 IGKV1-39P01597 117 aa12.22□□□□□ -0.45
CTDSP1-209ENST00000488627 IGKV1D-39P04432 117 aa12.22□□□□□ -0.45
CTDSP1-209ENST00000488627 ZP3P21754 424 aa12.22□□□□□ -0.45
CTDSP1-209ENST00000488627 PTBP1P26599 531 aaKnown RBP eCLIP12.22□□□□□ -0.452e-6■■□□□ 12.7
CTDSP1-209ENST00000488627 G6PCP35575 357 aa12.22□□□□□ -0.45
CTDSP1-209ENST00000488627 TAS2R19P59542 299 aa12.22□□□□□ -0.45
CTDSP1-209ENST00000488627 RND3P61587 244 aa12.22□□□□□ -0.45
CTDSP1-209ENST00000488627 ATP5G2Q06055 141 aa12.22□□□□□ -0.45
CTDSP1-209ENST00000488627 STEAP1BQ6NZ63 245 aa12.22□□□□□ -0.45
CTDSP1-209ENST00000488627 ZNF429Q86V71 674 aa12.22□□□□□ -0.45
CTDSP1-209ENST00000488627 NECAP1Q8NC96 275 aa12.22□□□□□ -0.45
CTDSP1-209ENST00000488627 TERB2Q8NHR7 220 aa12.22□□□□□ -0.45
CTDSP1-209ENST00000488627 RABL2AQ9UBK7 228 aaPredicted RBP12.22□□□□□ -0.45
CTDSP1-209ENST00000488627 RABL2BQ9UNT1 228 aa12.22□□□□□ -0.45
CTDSP1-209ENST00000488627 DMRT1Q9Y5R6 373 aa12.22□□□□□ -0.45
CTDSP1-209ENST00000488627 TEX50A0A1B0GTY4 177 aa12.21□□□□□ -0.45
CTDSP1-209ENST00000488627 PI3P19957 117 aa12.21□□□□□ -0.45
CTDSP1-209ENST00000488627 S100GP29377 79 aa12.21□□□□□ -0.45
CTDSP1-209ENST00000488627 ECI1P42126 302 aa12.21□□□□□ -0.45
CTDSP1-209ENST00000488627 ERVK-16P61578 105 aa12.21□□□□□ -0.45
CTDSP1-209ENST00000488627 IL18Q14116 193 aa12.21□□□□□ -0.45
CTDSP1-209ENST00000488627 IL34Q6ZMJ4 242 aa12.21□□□□□ -0.45
CTDSP1-209ENST00000488627 MCFD2Q8NI22 146 aa12.21□□□□□ -0.45
CTDSP1-209ENST00000488627 ZNF486Q96H40 463 aaPredicted RBP12.21□□□□□ -0.45
CTDSP1-209ENST00000488627 SEC22AQ96IW7 307 aa12.21□□□□□ -0.45
CTDSP1-209ENST00000488627 SRSF8Q9BRL6 282 aaKnown RBP12.21□□□□□ -0.45
CTDSP1-209ENST00000488627 COMMD5Q9GZQ3 224 aa12.21□□□□□ -0.45
CTDSP1-209ENST00000488627 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.2□□□□□ -0.46
CTDSP1-209ENST00000488627 GSTZ1O43708 216 aaPredicted RBP12.2□□□□□ -0.46
CTDSP1-209ENST00000488627 NDUFB8O95169 186 aa12.2□□□□□ -0.46
CTDSP1-209ENST00000488627 REG1AP05451 166 aa12.2□□□□□ -0.46
CTDSP1-209ENST00000488627 PGAM2P15259 253 aa12.2□□□□□ -0.46
CTDSP1-209ENST00000488627 EXOSC2Q13868 293 aaKnown RBP12.2□□□□□ -0.46
CTDSP1-209ENST00000488627 C15orf32Q32M92 178 aa12.2□□□□□ -0.46
CTDSP1-209ENST00000488627 FAAP20Q6NZ36 180 aa12.2□□□□□ -0.46
CTDSP1-209ENST00000488627 OR10W1Q8NGF6 305 aa12.2□□□□□ -0.46
CTDSP1-209ENST00000488627 QTRT1Q9BXR0 403 aaKnown RBP12.2□□□□□ -0.46
CTDSP1-209ENST00000488627 NDUFA4L2Q9NRX3 87 aa12.2□□□□□ -0.46
CTDSP1-209ENST00000488627 FBXL7Q9UJT9 491 aa12.2□□□□□ -0.46
CTDSP1-209ENST00000488627 NSG2Q9Y328 171 aa12.2□□□□□ -0.46
CTDSP1-209ENST00000488627 IGLV11-55A0A075B6I3 123 aa12.19□□□□□ -0.46
CTDSP1-209ENST00000488627 DPPA5A6NC42 116 aa12.19□□□□□ -0.46
CTDSP1-209ENST00000488627 DBX1A6NMT0 343 aa12.19□□□□□ -0.46
CTDSP1-209ENST00000488627 BMPR1BO00238 502 aa12.19□□□□□ -0.46
CTDSP1-209ENST00000488627 SAP30O75446 220 aa12.19□□□□□ -0.46
CTDSP1-209ENST00000488627 PIGPP57054 158 aa12.19□□□□□ -0.46
CTDSP1-209ENST00000488627 DEFB121Q5J5C9 76 aa12.19□□□□□ -0.46
CTDSP1-209ENST00000488627 OR1L8Q8NGR8 309 aa12.19□□□□□ -0.46
CTDSP1-209ENST00000488627 PRR25Q96S07 402 aa12.19□□□□□ -0.46
CTDSP1-209ENST00000488627 RSL24D1Q9UHA3 163 aaKnown RBP12.19□□□□□ -0.46
CTDSP1-209ENST00000488627 LSM4Q9Y4Z0 139 aaKnown RBP12.19□□□□□ -0.46
CTDSP1-209ENST00000488627 ANKRD20A5PA0PJZ0 165 aa12.18□□□□□ -0.46
CTDSP1-209ENST00000488627 FABP12A6NFH5 140 aa12.18□□□□□ -0.46
CTDSP1-209ENST00000488627 ZNF701M0R085 212 aaPredicted RBP12.18□□□□□ -0.46
CTDSP1-209ENST00000488627 TRAPPC2P0DI81 140 aa12.18□□□□□ -0.46
CTDSP1-209ENST00000488627 TRAPPC2BP0DI82 140 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms