RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 MARCH11A6NNE9 402 aa13.13□□□□□ -0.31
HMG20B-212ENST00000487894 SEC14L6B5MCN3 397 aa13.13□□□□□ -0.31
HMG20B-212ENST00000487894 UPK2O00526 184 aa13.13□□□□□ -0.31
HMG20B-212ENST00000487894 PRH1P02810 166 aa13.13□□□□□ -0.31
HMG20B-212ENST00000487894 HSPB1P04792 205 aaKnown RBP13.13□□□□□ -0.31
HMG20B-212ENST00000487894 RPA2P15927 270 aa13.13□□□□□ -0.31
HMG20B-212ENST00000487894 TNFSF8P32971 234 aa13.13□□□□□ -0.31
HMG20B-212ENST00000487894 LPAR6P43657 344 aa13.13□□□□□ -0.31
HMG20B-212ENST00000487894 PPP5CP53041 499 aa13.13□□□□□ -0.31
HMG20B-212ENST00000487894 C9orf66Q5T8R8 295 aa13.13□□□□□ -0.31
HMG20B-212ENST00000487894 STEAP1BQ6NZ63 245 aa13.13□□□□□ -0.31
HMG20B-212ENST00000487894 C19orf35Q6ZS72 473 aa13.13□□□□□ -0.31
HMG20B-212ENST00000487894 DLX4Q92988 240 aaPredicted RBP13.13□□□□□ -0.31
HMG20B-212ENST00000487894 FYTTD1Q96QD9 318 aaKnown RBP13.13□□□□□ -0.31
HMG20B-212ENST00000487894 SLC2A9Q9NRM0 540 aa13.13□□□□□ -0.31
HMG20B-212ENST00000487894 RSL24D1Q9UHA3 163 aaKnown RBP13.13□□□□□ -0.31
HMG20B-212ENST00000487894 TRBV9A0A0B4J1U6 114 aa13.12□□□□□ -0.31
HMG20B-212ENST00000487894 NPIPB5A8MRT5 1133 aa13.12□□□□□ -0.31
HMG20B-212ENST00000487894 OVOL1O14753 267 aa13.12□□□□□ -0.31
HMG20B-212ENST00000487894 RAB3DO95716 219 aa13.12□□□□□ -0.31
HMG20B-212ENST00000487894 FGF2P09038 288 aa13.12□□□□□ -0.31
HMG20B-212ENST00000487894 AREGP15514 252 aa13.12□□□□□ -0.31
HMG20B-212ENST00000487894 S100GP29377 79 aa13.12□□□□□ -0.31
HMG20B-212ENST00000487894 ERVK-16P61578 105 aa13.12□□□□□ -0.31
HMG20B-212ENST00000487894 RND3P61587 244 aa13.12□□□□□ -0.31
HMG20B-212ENST00000487894 FAAP20Q6NZ36 180 aa13.12□□□□□ -0.31
HMG20B-212ENST00000487894 SLC25A42Q86VD7 318 aa13.12□□□□□ -0.31
HMG20B-212ENST00000487894 MRAPQ8TCY5 172 aa13.12□□□□□ -0.31
HMG20B-212ENST00000487894 USMG5Q96IX5 58 aa13.12□□□□□ -0.31
HMG20B-212ENST00000487894 SOSTQ9BQB4 213 aa13.12□□□□□ -0.31
HMG20B-212ENST00000487894 AKIP1Q9NQ31 210 aa13.12□□□□□ -0.31
HMG20B-212ENST00000487894 FAM212BQ9NTI7 297 aaPredicted RBP13.12□□□□□ -0.31
HMG20B-212ENST00000487894 ZNF257Q9Y2Q1 563 aa13.12□□□□□ -0.31
HMG20B-212ENST00000487894 FAM223BA6NKX1 122 aa13.11□□□□□ -0.31
HMG20B-212ENST00000487894 ZNF701M0R085 212 aaPredicted RBP13.11□□□□□ -0.31
HMG20B-212ENST00000487894 GSTZ1O43708 216 aaPredicted RBP13.11□□□□□ -0.31
HMG20B-212ENST00000487894 PGAM2P15259 253 aa13.11□□□□□ -0.31
HMG20B-212ENST00000487894 PI3P19957 117 aa13.11□□□□□ -0.31
HMG20B-212ENST00000487894 G6PCP35575 357 aa13.11□□□□□ -0.31
HMG20B-212ENST00000487894 OR2B8PP59922 312 aa13.11□□□□□ -0.31
HMG20B-212ENST00000487894 RHOGP84095 191 aa13.11□□□□□ -0.31
HMG20B-212ENST00000487894 ZNF343Q6P1L6 599 aa13.11□□□□□ -0.31
HMG20B-212ENST00000487894 FAM223AQ8IWN6 122 aa13.11□□□□□ -0.31
HMG20B-212ENST00000487894 MRGPRFQ96AM1 343 aa13.11□□□□□ -0.31
HMG20B-212ENST00000487894 ZNF486Q96H40 463 aaPredicted RBP13.11□□□□□ -0.31
HMG20B-212ENST00000487894 WI2-2373I1.2A0A1W2PRP0 233 aa13.1□□□□□ -0.31
HMG20B-212ENST00000487894 ANKRD34BA5PLL1 514 aa13.1□□□□□ -0.31
HMG20B-212ENST00000487894 DPPA5A6NC42 116 aa13.1□□□□□ -0.31
HMG20B-212ENST00000487894 K7EIL1 84 aa13.1□□□□□ -0.31
HMG20B-212ENST00000487894 KRASP01116 189 aa13.1□□□□□ -0.31
HMG20B-212ENST00000487894 IGKV1-39P01597 117 aa13.1□□□□□ -0.31
HMG20B-212ENST00000487894 IGKV1D-39P04432 117 aa13.1□□□□□ -0.31
HMG20B-212ENST00000487894 CRYGCP07315 174 aa13.1□□□□□ -0.31
HMG20B-212ENST00000487894 CTRB1P17538 263 aa13.1□□□□□ -0.31
HMG20B-212ENST00000487894 PTBP1P26599 531 aaKnown RBP eCLIP13.1□□□□□ -0.31
HMG20B-212ENST00000487894 PSMB6P28072 239 aa13.1□□□□□ -0.31
HMG20B-212ENST00000487894 MEF2DQ14814 521 aa13.1□□□□□ -0.31
HMG20B-212ENST00000487894 SCGB2B2Q4G0G5 96 aa13.1□□□□□ -0.31
HMG20B-212ENST00000487894 CTRB2Q6GPI1 263 aa13.1□□□□□ -0.31
HMG20B-212ENST00000487894 CADM3Q8N126 398 aa13.1□□□□□ -0.31
HMG20B-212ENST00000487894 OR4C16Q8NGL9 310 aa13.1□□□□□ -0.31
HMG20B-212ENST00000487894 TERB2Q8NHR7 220 aa13.1□□□□□ -0.31
HMG20B-212ENST00000487894 RANGRFQ9HD47 186 aaPredicted RBP13.1□□□□□ -0.31
HMG20B-212ENST00000487894 IGLC7A0M8Q6 106 aa13.09□□□□□ -0.31
HMG20B-212ENST00000487894 FABP12A6NFH5 140 aa13.09□□□□□ -0.31
HMG20B-212ENST00000487894 OR2J3O76001 311 aa13.09□□□□□ -0.31
HMG20B-212ENST00000487894 TRBV12-3P01733 135 aa13.09□□□□□ -0.31
HMG20B-212ENST00000487894 REG1AP05451 166 aa13.09□□□□□ -0.31
HMG20B-212ENST00000487894 AKAIN1P0CW23 69 aa13.09□□□□□ -0.31
HMG20B-212ENST00000487894 PIGPP57054 158 aa13.09□□□□□ -0.31
HMG20B-212ENST00000487894 EXOSC2Q13868 293 aaKnown RBP13.09□□□□□ -0.31
HMG20B-212ENST00000487894 NECAP1Q8NC96 275 aa13.09□□□□□ -0.31
HMG20B-212ENST00000487894 OR13C8Q8NGS7 320 aa13.09□□□□□ -0.31
HMG20B-212ENST00000487894 MARCH1Q8TCQ1 289 aa13.09□□□□□ -0.31
HMG20B-212ENST00000487894 FANCD2OSQ96PS1 177 aa13.09□□□□□ -0.31
HMG20B-212ENST00000487894 COMMD5Q9GZQ3 224 aa13.09□□□□□ -0.31
HMG20B-212ENST00000487894 PEF1Q9UBV8 284 aaKnown RBP13.09□□□□□ -0.31
HMG20B-212ENST00000487894 ANKRD20A5PA0PJZ0 165 aa13.08□□□□□ -0.32
HMG20B-212ENST00000487894 KLK9Q2XQG4 91 aa13.08□□□□□ -0.32
HMG20B-212ENST00000487894 ACSM6Q6P461 480 aa13.08□□□□□ -0.32
HMG20B-212ENST00000487894 SEC22AQ96IW7 307 aa13.08□□□□□ -0.32
HMG20B-212ENST00000487894 QTRT1Q9BXR0 403 aaKnown RBP13.08□□□□□ -0.32
HMG20B-212ENST00000487894 KLK9Q9UKQ9 250 aa13.08□□□□□ -0.32
HMG20B-212ENST00000487894 NSG2Q9Y328 171 aa13.08□□□□□ -0.32
HMG20B-212ENST00000487894 V9GYH0 126 aa13.08□□□□□ -0.32
HMG20B-212ENST00000487894 TEX50A0A1B0GTY4 177 aa13.07□□□□□ -0.32
HMG20B-212ENST00000487894 DISC1C4P0D8 188 aa13.07□□□□□ -0.32
HMG20B-212ENST00000487894 H0Y980 276 aa13.07□□□□□ -0.32
HMG20B-212ENST00000487894 ZP3P21754 424 aa13.07□□□□□ -0.32
HMG20B-212ENST00000487894 INSL3P51460 131 aa13.07□□□□□ -0.32
HMG20B-212ENST00000487894 ATP5G2Q06055 141 aa13.07□□□□□ -0.32
HMG20B-212ENST00000487894 C15orf32Q32M92 178 aa13.07□□□□□ -0.32
HMG20B-212ENST00000487894 THOC7Q6I9Y2 204 aaKnown RBP13.07□□□□□ -0.32
HMG20B-212ENST00000487894 OR10W1Q8NGF6 305 aa13.07□□□□□ -0.32
HMG20B-212ENST00000487894 ZFAND1Q8TCF1 268 aa13.07□□□□□ -0.32
HMG20B-212ENST00000487894 TP53RKQ96S44 253 aa13.07□□□□□ -0.32
HMG20B-212ENST00000487894 SRSF8Q9BRL6 282 aaKnown RBP13.07□□□□□ -0.32
HMG20B-212ENST00000487894 COL7A1Q02388 2944 aa13.07□□□□□ -0.32
HMG20B-212ENST00000487894 SORL1Q92673 2214 aa13.07□□□□□ -0.32
HMG20B-212ENST00000487894 IGLV11-55A0A075B6I3 123 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms