RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 IRGMA1A4Y4 181 aa11.76□□□□□ -0.53
TOM1-214ENST00000487670 OR2T8A6NH00 312 aa11.76□□□□□ -0.53
TOM1-214ENST00000487670 CDK2AP2O75956 126 aa11.76□□□□□ -0.53
TOM1-214ENST00000487670 KBTBD11O94819 623 aa11.76□□□□□ -0.53
TOM1-214ENST00000487670 AMBPP02760 352 aa11.76□□□□□ -0.53
TOM1-214ENST00000487670 BRWD1-AS2P59051 145 aa11.76□□□□□ -0.53
TOM1-214ENST00000487670 PLET1Q6UQ28 207 aa11.76□□□□□ -0.53
TOM1-214ENST00000487670 PUSL1Q8N0Z8 303 aaKnown RBP11.76□□□□□ -0.53
TOM1-214ENST00000487670 Q8N1X5 172 aa11.76□□□□□ -0.53
TOM1-214ENST00000487670 FAM89BQ8N5H3 189 aa11.76□□□□□ -0.53
TOM1-214ENST00000487670 OR4A4PQ8NGN8 299 aa11.76□□□□□ -0.53
TOM1-214ENST00000487670 RNF2Q99496 336 aa11.76□□□□□ -0.53
TOM1-214ENST00000487670 DCUN1D5Q9BTE7 237 aa11.76□□□□□ -0.53
TOM1-214ENST00000487670 RNF126Q9BV68 326 aa11.76□□□□□ -0.53
TOM1-214ENST00000487670 MGAT4AQ9UM21 535 aa11.76□□□□□ -0.53
TOM1-214ENST00000487670 KCNK7Q9Y2U2 307 aa11.76□□□□□ -0.53
TOM1-214ENST00000487670 VPS13BQ7Z7G8 4022 aa11.75□□□□□ -0.53
TOM1-214ENST00000487670 IGKV1D-8A0A087WSZ0 117 aa11.75□□□□□ -0.53
TOM1-214ENST00000487670 IGHV3-21A0A0B4J1V1 117 aa11.75□□□□□ -0.53
TOM1-214ENST00000487670 C16orf90A8MZG2 172 aa11.75□□□□□ -0.53
TOM1-214ENST00000487670 TGOLN2O43493 480 aa11.75□□□□□ -0.53
TOM1-214ENST00000487670 MYL12AP19105 171 aa11.75□□□□□ -0.53
TOM1-214ENST00000487670 CELP19835 753 aa11.75□□□□□ -0.53
TOM1-214ENST00000487670 HSPA13P48723 471 aa11.75□□□□□ -0.53
TOM1-214ENST00000487670 TMEM187Q14656 261 aa11.75□□□□□ -0.53
TOM1-214ENST00000487670 CNBD2Q96M20 576 aa11.75□□□□□ -0.53
TOM1-214ENST00000487670 GPHA2Q96T91 129 aa11.75□□□□□ -0.53
TOM1-214ENST00000487670 C20orf24Q9BUV8 137 aa11.75□□□□□ -0.53
TOM1-214ENST00000487670 OR51E2Q9H255 320 aa11.75□□□□□ -0.53
TOM1-214ENST00000487670 HRH4Q9H3N8 390 aa11.75□□□□□ -0.53
TOM1-214ENST00000487670 DAZ1Q9NQZ3 744 aaKnown RBP11.75□□□□□ -0.53
TOM1-214ENST00000487670 PTGES3LE9PB15 166 aa11.74□□□□□ -0.53
TOM1-214ENST00000487670 FCGR3AP08637 254 aa11.74□□□□□ -0.53
TOM1-214ENST00000487670 TNP2Q05952 138 aa11.74□□□□□ -0.53
TOM1-214ENST00000487670 RBM48Q5RL73 367 aaKnown RBP11.74□□□□□ -0.53
TOM1-214ENST00000487670 LEMD1Q68G75 181 aa11.74□□□□□ -0.53
TOM1-214ENST00000487670 LAMTOR1Q6IAA8 161 aa11.74□□□□□ -0.53
TOM1-214ENST00000487670 GBGT1Q8N5D6 347 aa11.74□□□□□ -0.53
TOM1-214ENST00000487670 FAM24BQ8N5W8 94 aa11.74□□□□□ -0.53
TOM1-214ENST00000487670 OR10J5Q8NHC4 309 aa11.74□□□□□ -0.53
TOM1-214ENST00000487670 TMEM167AQ8TBQ9 72 aa11.74□□□□□ -0.53
TOM1-214ENST00000487670 ADTRPQ96IZ2 230 aa11.74□□□□□ -0.53
TOM1-214ENST00000487670 HSF4Q9ULV5 492 aa11.74□□□□□ -0.53
TOM1-214ENST00000487670 RAB26Q9ULW5 256 aa11.74□□□□□ -0.53
TOM1-214ENST00000487670 RBM7Q9Y580 266 aaKnown RBP11.74□□□□□ -0.53
TOM1-214ENST00000487670 ETV7Q9Y603 341 aa11.74□□□□□ -0.53
TOM1-214ENST00000487670 F8W735 103 aaPredicted RBP11.73□□□□□ -0.53
TOM1-214ENST00000487670 CREBL2O60519 120 aaPredicted RBP11.73□□□□□ -0.53
TOM1-214ENST00000487670 IGLV2-14P01704 120 aa11.73□□□□□ -0.53
TOM1-214ENST00000487670 CDK1P06493 297 aa11.73□□□□□ -0.53
TOM1-214ENST00000487670 ADMP35318 185 aa11.73□□□□□ -0.53
TOM1-214ENST00000487670 PSMD7P51665 324 aa11.73□□□□□ -0.53
TOM1-214ENST00000487670 TPBGQ13641 420 aa11.73□□□□□ -0.53
TOM1-214ENST00000487670 C12orf74Q32Q52 190 aa11.73□□□□□ -0.53
TOM1-214ENST00000487670 Q6ZRM9 215 aa11.73□□□□□ -0.53
TOM1-214ENST00000487670 KCTD9Q7L273 389 aa11.73□□□□□ -0.53
TOM1-214ENST00000487670 SCRT2Q9NQ03 307 aa11.73□□□□□ -0.53
TOM1-214ENST00000487670 X6R8D5 127 aa11.73□□□□□ -0.53
TOM1-214ENST00000487670 IGHV3OR16-13A0A075B7E8 117 aa11.72□□□□□ -0.53
TOM1-214ENST00000487670 IGHV3-74A0A0B4J1X5 117 aa11.72□□□□□ -0.53
TOM1-214ENST00000487670 IGLC7A0M8Q6 106 aa11.72□□□□□ -0.53
TOM1-214ENST00000487670 BPNT1O95861 308 aa11.72□□□□□ -0.53
TOM1-214ENST00000487670 P0DMU3 169 aa11.72□□□□□ -0.53
TOM1-214ENST00000487670 FAM231AP0DMU4 169 aa11.72□□□□□ -0.53
TOM1-214ENST00000487670 FAM231CP0DMU5 169 aa11.72□□□□□ -0.53
TOM1-214ENST00000487670 DEFA4P12838 97 aa11.72□□□□□ -0.53
TOM1-214ENST00000487670 C4BPBP20851 252 aa11.72□□□□□ -0.53
TOM1-214ENST00000487670 CRHBPP24387 322 aa11.72□□□□□ -0.53
TOM1-214ENST00000487670 SERPINB10P48595 397 aa11.72□□□□□ -0.53
TOM1-214ENST00000487670 CLDN12P56749 244 aa11.72□□□□□ -0.53
TOM1-214ENST00000487670 H1FOOQ8IZA3 346 aaPredicted RBP11.72□□□□□ -0.53
TOM1-214ENST00000487670 CXorf58Q96LI9 332 aa11.72□□□□□ -0.53
TOM1-214ENST00000487670 OR2A7Q96R45 310 aa11.72□□□□□ -0.53
TOM1-214ENST00000487670 C6orf62Q9GZU0 229 aaPredicted RBP11.72□□□□□ -0.53
TOM1-214ENST00000487670 DUSP21Q9H596 190 aa11.72□□□□□ -0.53
TOM1-214ENST00000487670 DEFB131BA0A096LNP1 70 aa11.71□□□□□ -0.53
TOM1-214ENST00000487670 TRAV3A0A0B4J244 114 aa11.71□□□□□ -0.53
TOM1-214ENST00000487670 IGKV1D-13A0A0B4J2D9 117 aa11.71□□□□□ -0.53
TOM1-214ENST00000487670 IGKV1-13P0DP09 117 aa11.71□□□□□ -0.53
TOM1-214ENST00000487670 CD37P11049 281 aa11.71□□□□□ -0.53
TOM1-214ENST00000487670 HIST1H1BP16401 226 aaKnown RBP11.71□□□□□ -0.53
TOM1-214ENST00000487670 ARFRP1Q13795 201 aa11.71□□□□□ -0.53
TOM1-214ENST00000487670 IRF3Q14653 427 aa11.71□□□□□ -0.53
TOM1-214ENST00000487670 NR2C2APQ86WQ0 139 aa11.71□□□□□ -0.53
TOM1-214ENST00000487670 NANOGP1Q8N7R0 232 aa11.71□□□□□ -0.53
TOM1-214ENST00000487670 LSM2Q9Y333 95 aaKnown RBP11.71□□□□□ -0.53
TOM1-214ENST00000487670 C15orf61A6NNL5 157 aa11.7□□□□□ -0.54
TOM1-214ENST00000487670 CHEK1O14757 476 aa11.7□□□□□ -0.54
TOM1-214ENST00000487670 MYL12BO14950 172 aa11.7□□□□□ -0.54
TOM1-214ENST00000487670 WNT4P56705 351 aa11.7□□□□□ -0.54
TOM1-214ENST00000487670 EIF4EBP1Q13541 118 aaPredicted RBP11.7□□□□□ -0.54
TOM1-214ENST00000487670 ACSM3Q53FZ2 586 aa11.7□□□□□ -0.54
TOM1-214ENST00000487670 OR10W1Q8NGF6 305 aa11.7□□□□□ -0.54
TOM1-214ENST00000487670 GINS4Q9BRT9 223 aa11.7□□□□□ -0.54
TOM1-214ENST00000487670 URM1Q9BTM9 101 aaKnown RBP11.7□□□□□ -0.54
TOM1-214ENST00000487670 SCN3BQ9NY72 215 aa11.7□□□□□ -0.54
TOM1-214ENST00000487670 SMPXQ9UHP9 88 aa11.7□□□□□ -0.54
TOM1-214ENST00000487670 ELF5Q9UKW6 265 aaPredicted RBP11.7□□□□□ -0.54
TOM1-214ENST00000487670 DENRO43583 198 aaKnown RBP11.69□□□□□ -0.54
TOM1-214ENST00000487670 CD74P04233 296 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms