RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 VMA21Q3ZAQ7 101 aa11.56□□□□□ -0.56
COL9A1-207ENST00000486080 OR2C3Q8N628 320 aa11.56□□□□□ -0.56
COL9A1-207ENST00000486080 TMEM167AQ8TBQ9 72 aa11.56□□□□□ -0.56
COL9A1-207ENST00000486080 DTD1Q8TEA8 209 aa11.56□□□□□ -0.56
COL9A1-207ENST00000486080 EAF1Q96JC9 268 aaPredicted RBP11.56□□□□□ -0.56
COL9A1-207ENST00000486080 ZNF430Q9H8G1 570 aaPredicted RBP11.56□□□□□ -0.56
COL9A1-207ENST00000486080 ZC4H2Q9NQZ6 224 aa11.56□□□□□ -0.56
COL9A1-207ENST00000486080 LYRM2Q9NU23 88 aaPredicted RBP11.56□□□□□ -0.56
COL9A1-207ENST00000486080 PRNDQ9UKY0 176 aa11.56□□□□□ -0.56
COL9A1-207ENST00000486080 TCF19Q9Y242 345 aa11.56□□□□□ -0.56
COL9A1-207ENST00000486080 ZFHX3Q15911 3703 aa11.55□□□□□ -0.56
COL9A1-207ENST00000486080 MYO9AB2RTY4 2548 aa11.55□□□□□ -0.56
COL9A1-207ENST00000486080 J3QLI3 93 aa11.55□□□□□ -0.56
COL9A1-207ENST00000486080 GPR137BO60478 399 aa11.55□□□□□ -0.56
COL9A1-207ENST00000486080 MED6O75586 246 aa11.55□□□□□ -0.56
COL9A1-207ENST00000486080 SPCS3P61009 180 aa11.55□□□□□ -0.56
COL9A1-207ENST00000486080 NHLH2Q02577 135 aa11.55□□□□□ -0.56
COL9A1-207ENST00000486080 CYB5R2Q6BCY4 276 aa11.55□□□□□ -0.56
COL9A1-207ENST00000486080 OR52E5Q8NH55 327 aa11.55□□□□□ -0.56
COL9A1-207ENST00000486080 VSTM2AQ8TAG5 236 aa11.55□□□□□ -0.56
COL9A1-207ENST00000486080 SMIM8Q96KF7 97 aa11.55□□□□□ -0.56
COL9A1-207ENST00000486080 TSNAXQ99598 290 aaKnown RBP11.55□□□□□ -0.56
COL9A1-207ENST00000486080 PSENENQ9NZ42 101 aa11.55□□□□□ -0.56
COL9A1-207ENST00000486080 NUP50Q9UKX7 468 aa11.55□□□□□ -0.56
COL9A1-207ENST00000486080 TEX50A0A1B0GTY4 177 aa11.54□□□□□ -0.56
COL9A1-207ENST00000486080 HSPE1P61604 102 aaKnown RBP11.54□□□□□ -0.56
COL9A1-207ENST00000486080 RPL23AP62750 156 aaKnown RBP11.54□□□□□ -0.56
COL9A1-207ENST00000486080 RPL8P62917 257 aaKnown RBP11.54□□□□□ -0.56
COL9A1-207ENST00000486080 PDLIM3Q53GG5 364 aaPredicted RBP11.54□□□□□ -0.56
COL9A1-207ENST00000486080 TEX45Q8NA69 505 aa11.54□□□□□ -0.56
COL9A1-207ENST00000486080 OR2T10Q8NGZ9 312 aa11.54□□□□□ -0.56
COL9A1-207ENST00000486080 RNF5Q99942 180 aa11.54□□□□□ -0.56
COL9A1-207ENST00000486080 FBXL15Q9H469 300 aa11.54□□□□□ -0.56
COL9A1-207ENST00000486080 METTL1Q9UBP6 276 aaKnown RBP11.54□□□□□ -0.56
COL9A1-207ENST00000486080 SIGLEC9Q9Y336 463 aa11.54□□□□□ -0.56
COL9A1-207ENST00000486080 WSB1Q9Y6I7 421 aa11.54□□□□□ -0.56
COL9A1-207ENST00000486080 TLN2Q9Y4G6 2542 aa11.54□□□□□ -0.56
COL9A1-207ENST00000486080 BCL2L11O43521 198 aa11.53□□□□□ -0.56
COL9A1-207ENST00000486080 EWSR1Q01844 656 aaKnown RBP eCLIP11.53□□□□□ -0.56
COL9A1-207ENST00000486080 TMEM267Q0VDI3 215 aaPredicted RBP11.53□□□□□ -0.56
COL9A1-207ENST00000486080 MMDQ15546 238 aa11.53□□□□□ -0.56
COL9A1-207ENST00000486080 SPANXN5Q5MJ07 72 aa11.53□□□□□ -0.56
COL9A1-207ENST00000486080 C10orf55Q5SWW7 151 aa11.53□□□□□ -0.56
COL9A1-207ENST00000486080 TMEM252Q8N6L7 170 aa11.53□□□□□ -0.56
COL9A1-207ENST00000486080 OR4A5Q8NH83 315 aa11.53□□□□□ -0.56
COL9A1-207ENST00000486080 CLCC1Q96S66 551 aa11.53□□□□□ -0.56
COL9A1-207ENST00000486080 HINT2Q9BX68 163 aa11.53□□□□□ -0.56
COL9A1-207ENST00000486080 SMIM3Q9BZL3 60 aa11.53□□□□□ -0.56
COL9A1-207ENST00000486080 ITGB1BP2Q9UKP3 347 aa11.53□□□□□ -0.56
COL9A1-207ENST00000486080 E7EUB6 86 aa11.53□□□□□ -0.56
COL9A1-207ENST00000486080 CST7O76096 145 aa11.53□□□□□ -0.56
COL9A1-207ENST00000486080 VDAC2P45880 294 aaPredicted RBP11.53□□□□□ -0.56
COL9A1-207ENST00000486080 EBI3Q14213 229 aa11.53□□□□□ -0.56
COL9A1-207ENST00000486080 PRSS8Q16651 343 aa11.53□□□□□ -0.56
COL9A1-207ENST00000486080 Q8N6K4 173 aa11.53□□□□□ -0.56
COL9A1-207ENST00000486080 OR4C12Q96R67 309 aa11.53□□□□□ -0.56
COL9A1-207ENST00000486080 FBXL17Q9UF56 701 aa11.53□□□□□ -0.56
COL9A1-207ENST00000486080 KANTRA0A1W2PQU2 76 aa11.52□□□□□ -0.57
COL9A1-207ENST00000486080 FCN1O00602 326 aa11.52□□□□□ -0.57
COL9A1-207ENST00000486080 RRHO14718 337 aa11.52□□□□□ -0.57
COL9A1-207ENST00000486080 C4BPBP20851 252 aa11.52□□□□□ -0.57
COL9A1-207ENST00000486080 BRS3P32247 399 aa11.52□□□□□ -0.57
COL9A1-207ENST00000486080 TAS2R30P59541 319 aa11.52□□□□□ -0.57
COL9A1-207ENST00000486080 THNSL2Q86YJ6 484 aa11.52□□□□□ -0.57
COL9A1-207ENST00000486080 NPBQ8NG41 125 aa11.52□□□□□ -0.57
COL9A1-207ENST00000486080 ARPC5LQ9BPX5 153 aa11.52□□□□□ -0.57
COL9A1-207ENST00000486080 COMMD5Q9GZQ3 224 aa11.52□□□□□ -0.57
COL9A1-207ENST00000486080 CYTL1Q9NRR1 136 aa11.52□□□□□ -0.57
COL9A1-207ENST00000486080 FKBP11Q9NYL4 201 aa11.52□□□□□ -0.57
COL9A1-207ENST00000486080 ZNF257Q9Y2Q1 563 aa11.52□□□□□ -0.57
COL9A1-207ENST00000486080 ACANP16112 2415 aa11.52□□□□□ -0.57
COL9A1-207ENST00000486080 A0A1B0GW64 132 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 NBR2O15453 112 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 CFDP00746 253 aaPredicted RBP11.51□□□□□ -0.57
COL9A1-207ENST00000486080 FGF2P09038 288 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 METTL15P1P0C7V9 234 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 TMEM11P17152 192 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 HOXA1P49639 335 aaPredicted RBP11.51□□□□□ -0.57
COL9A1-207ENST00000486080 PRCDQ00LT1 54 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 PLGLAQ15195 96 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 PPP1R27Q86WC6 154 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 TMEM217Q8N7C4 229 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 OR10W1Q8NGF6 305 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 CIB3Q96Q77 187 aaPredicted RBP11.51□□□□□ -0.57
COL9A1-207ENST00000486080 GON7Q9BXV9 100 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 SLC25A31Q9H0C2 315 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 WFDC1Q9HC57 220 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 HEYLQ9NQ87 328 aaPredicted RBP11.51□□□□□ -0.57
COL9A1-207ENST00000486080 FAM96BQ9Y3D0 163 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 NAV3Q8IVL0 2385 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 CGB1A6NKQ9 187 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 NDUFA3O95167 84 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 SPDEFO95238 335 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 FAM106CPP0CH98 169 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 ARL16Q0P5N6 197 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 HAPLN4Q86UW8 402 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 BCL6BQ8N143 479 aaPredicted RBP11.51□□□□□ -0.57
COL9A1-207ENST00000486080 OR5B3Q8NH48 314 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 PIFOQ8TCI5 191 aa11.51□□□□□ -0.57
COL9A1-207ENST00000486080 ZNF471Q9BX82 626 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms