RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 BASP1P80723 227 aaKnown RBP1.72□□□□□ -2.13
SMC4-215ENST00000484799 Q6ZS49 121 aa1.72□□□□□ -2.13
SMC4-215ENST00000484799 OR6V1Q8N148 313 aa1.72□□□□□ -2.13
SMC4-215ENST00000484799 SLC35F6Q8N357 371 aa1.72□□□□□ -2.13
SMC4-215ENST00000484799 OR5J2Q8NH18 312 aa1.72□□□□□ -2.13
SMC4-215ENST00000484799 MRPL30Q8TCC3 161 aaKnown RBP1.72□□□□□ -2.13
SMC4-215ENST00000484799 FGF13Q92913 245 aa1.72□□□□□ -2.13
SMC4-215ENST00000484799 BTF3L4Q96K17 158 aa1.72□□□□□ -2.13
SMC4-215ENST00000484799 Q9BRP9 147 aa1.72□□□□□ -2.13
SMC4-215ENST00000484799 DCSTAMPQ9H295 470 aa1.72□□□□□ -2.13
SMC4-215ENST00000484799 NDUFB11Q9NX14 153 aa1.72□□□□□ -2.13
SMC4-215ENST00000484799 MRPL27Q9P0M9 148 aaKnown RBP1.72□□□□□ -2.13
SMC4-215ENST00000484799 SAMHD1Q9Y3Z3 626 aaKnown RBP1.72□□□□□ -2.13
SMC4-215ENST00000484799 SIPA1L1O43166 1804 aa1.72□□□□□ -2.13
SMC4-215ENST00000484799 SLX4Q8IY92 1834 aa1.71□□□□□ -2.14
SMC4-215ENST00000484799 TRBV20OR9-2A0A075B6H5 130 aa1.71□□□□□ -2.14
SMC4-215ENST00000484799 MUC21A0A0G2JKD1 596 aa1.71□□□□□ -2.14
SMC4-215ENST00000484799 A0A0J9YY10 115 aa1.71□□□□□ -2.14
SMC4-215ENST00000484799 MUC21A0A140T8X8 626 aa1.71□□□□□ -2.14
SMC4-215ENST00000484799 TMEM269A0A1B0GVZ9 245 aa1.71□□□□□ -2.14
SMC4-215ENST00000484799 A0A1B0GX78 115 aa1.71□□□□□ -2.14
SMC4-215ENST00000484799 SDHAF1A6NFY7 115 aa1.71□□□□□ -2.14
SMC4-215ENST00000484799 LY6LH3BQJ8 138 aa1.71□□□□□ -2.14
SMC4-215ENST00000484799 CREBL2O60519 120 aaPredicted RBP1.71□□□□□ -2.14
SMC4-215ENST00000484799 S100A7P31151 101 aa1.71□□□□□ -2.14
SMC4-215ENST00000484799 GUK1Q16774 197 aa1.71□□□□□ -2.14
SMC4-215ENST00000484799 IAH1Q2TAA2 248 aaPredicted RBP1.71□□□□□ -2.14
SMC4-215ENST00000484799 LPCAT3Q6P1A2 487 aa1.71□□□□□ -2.14
SMC4-215ENST00000484799 AGTRAPQ6RW13 159 aa1.71□□□□□ -2.14
SMC4-215ENST00000484799 LYZL1Q6UWQ5 148 aa1.71□□□□□ -2.14
SMC4-215ENST00000484799 SLC35E3Q7Z769 313 aa1.71□□□□□ -2.14
SMC4-215ENST00000484799 ACOT12Q8WYK0 555 aa1.71□□□□□ -2.14
SMC4-215ENST00000484799 PPP1R2P1Q96PQ5 205 aa1.71□□□□□ -2.14
SMC4-215ENST00000484799 KLF6Q99612 283 aaPredicted RBP1.71□□□□□ -2.14
SMC4-215ENST00000484799 WDR61Q9GZS3 305 aaKnown RBP1.71□□□□□ -2.14
SMC4-215ENST00000484799 NMNAT1Q9HAN9 279 aaPredicted RBP1.71□□□□□ -2.14
SMC4-215ENST00000484799 PAQR5Q9NXK6 330 aaPredicted RBP1.71□□□□□ -2.14
SMC4-215ENST00000484799 WRNQ14191 1432 aaPredicted RBP eCLIP1.71□□□□□ -2.14
SMC4-215ENST00000484799 LTBP2Q14767 1821 aa1.7□□□□□ -2.14
SMC4-215ENST00000484799 A0A087WUJ7 227 aa1.7□□□□□ -2.14
SMC4-215ENST00000484799 I3L521 148 aa1.7□□□□□ -2.14
SMC4-215ENST00000484799 J3QRE1 110 aa1.7□□□□□ -2.14
SMC4-215ENST00000484799 KLRC4O43908 158 aa1.7□□□□□ -2.14
SMC4-215ENST00000484799 ZFYVE9O95405 1425 aa1.7□□□□□ -2.14
SMC4-215ENST00000484799 NEFHP12036 1026 aa1.7□□□□□ -2.14
SMC4-215ENST00000484799 RPL5P46777 297 aaKnown RBP1.7□□□□□ -2.14
SMC4-215ENST00000484799 CCL20P78556 96 aa1.7□□□□□ -2.14
SMC4-215ENST00000484799 ZNF90Q03938 601 aa1.7□□□□□ -2.14
SMC4-215ENST00000484799 CDK10Q15131 360 aa1.7□□□□□ -2.14
SMC4-215ENST00000484799 OTOGLQ3ZCN5 2332 aa1.7□□□□□ -2.14
SMC4-215ENST00000484799 DYNAPQ8N1N2 210 aa1.7□□□□□ -2.14
SMC4-215ENST00000484799 ANKRD29Q8N6D5 301 aa1.7□□□□□ -2.14
SMC4-215ENST00000484799 PACRGLQ8N7B6 248 aa1.7□□□□□ -2.14
SMC4-215ENST00000484799 CCDC94Q9BW85 323 aaPredicted RBP1.7□□□□□ -2.14
SMC4-215ENST00000484799 TTTY13Q9BZ97 58 aa1.7□□□□□ -2.14
SMC4-215ENST00000484799 EFCAB1Q9HAE3 211 aa1.7□□□□□ -2.14
SMC4-215ENST00000484799 HHLA3Q9XRX5 114 aa1.7□□□□□ -2.14
SMC4-215ENST00000484799 FUT9Q9Y231 359 aa1.7□□□□□ -2.14
SMC4-215ENST00000484799 TIMM9Q9Y5J7 89 aa1.7□□□□□ -2.14
SMC4-215ENST00000484799 TMEM56-RWDD3S4R434 201 aa1.7□□□□□ -2.14
SMC4-215ENST00000484799 KDM5BQ9UGL1 1544 aa1.7□□□□□ -2.14
SMC4-215ENST00000484799 MTUS2Q5JR59 1369 aa1.7□□□□□ -2.14
SMC4-215ENST00000484799 CACNA1GO43497 2377 aa1.7□□□□□ -2.14
SMC4-215ENST00000484799 PIK3C2GO75747 1445 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 IGHV3-64A0A075B6Q5 118 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 TRGV4A0A0C4DH28 118 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 IRGMA1A4Y4 181 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 OR4C46A6NHA9 309 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 LEPROTO15243 131 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 ZNF189O75820 626 aaPredicted RBP1.69□□□□□ -2.14
SMC4-215ENST00000484799 OR2B3O76000 313 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 NSA2O95478 260 aaKnown RBP1.69□□□□□ -2.14
SMC4-215ENST00000484799 BPGMP07738 259 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 MSMBP08118 114 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 NFYAP23511 347 aaPredicted RBP1.69□□□□□ -2.14
SMC4-215ENST00000484799 CAPZBP47756 277 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 HINT1P49773 126 aaPredicted RBP1.69□□□□□ -2.14
SMC4-215ENST00000484799 TPI1P60174 286 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 LIN52Q52LA3 116 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 RPL22L1Q6P5R6 122 aaKnown RBP1.69□□□□□ -2.14
SMC4-215ENST00000484799 OOSP2Q86WS3 158 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 OR8B12Q8NGG6 310 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 OR13C4Q8NGS5 318 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 OR2T4Q8NH00 348 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 MCFD2Q8NI22 146 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 CT55Q8WUE5 264 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 SLC7A6Q92536 515 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 TSPAN32Q96QS1 320 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 KIFC1Q9BW19 673 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 C20orf27Q9GZN8 174 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 CXCL16Q9H2A7 254 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 CMTM6Q9NX76 183 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 IL36BQ9NZH7 164 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 PKIGQ9Y2B9 76 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 PRELID3BQ9Y3B1 194 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 ARL5AQ9Y689 179 aa1.69□□□□□ -2.14
SMC4-215ENST00000484799 ARHGAP32A7KAX9 2087 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 TRAV26-2A0A0B4J265 109 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 TRAV41A0A0B4J266 112 aa1.68□□□□□ -2.14
SMC4-215ENST00000484799 MDFIC2A0A1B0GVS7 189 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms