RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 HLA-GP17693 338 aa10.43□□□□□ -0.74
HDAC1-208ENST00000482310 SRPXP78539 464 aa10.43□□□□□ -0.74
HDAC1-208ENST00000482310 POU2AF1Q16633 256 aa10.43□□□□□ -0.74
HDAC1-208ENST00000482310 AWAT1Q58HT5 328 aa10.43□□□□□ -0.74
HDAC1-208ENST00000482310 ZNF329Q86UD4 541 aa10.43□□□□□ -0.74
HDAC1-208ENST00000482310 C11orf44Q8N8P7 122 aa10.43□□□□□ -0.74
HDAC1-208ENST00000482310 OR4A5Q8NH83 315 aa10.43□□□□□ -0.74
HDAC1-208ENST00000482310 COQ8AQ8NI60 647 aa10.43□□□□□ -0.74
HDAC1-208ENST00000482310 SRSF12Q8WXF0 261 aaKnown RBP10.43□□□□□ -0.74
HDAC1-208ENST00000482310 TMEM56Q96MV1 263 aa10.43□□□□□ -0.74
HDAC1-208ENST00000482310 QTRT1Q9BXR0 403 aaKnown RBP10.43□□□□□ -0.74
HDAC1-208ENST00000482310 C16orf95Q9H693 158 aa10.43□□□□□ -0.74
HDAC1-208ENST00000482310 OR51B2Q9Y5P1 312 aa10.43□□□□□ -0.74
HDAC1-208ENST00000482310 TMEM56-RWDD3S4R434 201 aa10.43□□□□□ -0.74
HDAC1-208ENST00000482310 HMX3A6NHT5 357 aa10.42□□□□□ -0.74
HDAC1-208ENST00000482310 AP4M1O00189 453 aa10.42□□□□□ -0.74
HDAC1-208ENST00000482310 CCSO14618 274 aa10.42□□□□□ -0.74
HDAC1-208ENST00000482310 ADAP1O75689 374 aa10.42□□□□□ -0.74
HDAC1-208ENST00000482310 VDAC1P21796 283 aa10.42□□□□□ -0.74
HDAC1-208ENST00000482310 RPL27AP46776 148 aaKnown RBP10.42□□□□□ -0.74
HDAC1-208ENST00000482310 COMPP49747 757 aaPredicted RBP10.42□□□□□ -0.74
HDAC1-208ENST00000482310 FOXL1Q12952 345 aa10.42□□□□□ -0.74
HDAC1-208ENST00000482310 UNQ5815/PRO19632Q6UWF5 114 aa10.42□□□□□ -0.74
HDAC1-208ENST00000482310 CENPVQ7Z7K6 275 aaPredicted RBP10.42□□□□□ -0.74
HDAC1-208ENST00000482310 Q8N2B8 174 aa10.42□□□□□ -0.74
HDAC1-208ENST00000482310 STPG2Q8N412 459 aa10.42□□□□□ -0.74
HDAC1-208ENST00000482310 LFNGQ8NES3 379 aa10.42□□□□□ -0.74
HDAC1-208ENST00000482310 ZNF431Q8TF32 576 aaPredicted RBP10.42□□□□□ -0.74
HDAC1-208ENST00000482310 GPR146Q96CH1 333 aa10.42□□□□□ -0.74
HDAC1-208ENST00000482310 COMMD5Q9GZQ3 224 aa10.42□□□□□ -0.74
HDAC1-208ENST00000482310 CACNG5Q9UF02 275 aa10.42□□□□□ -0.74
HDAC1-208ENST00000482310 MMP24Q9Y5R2 645 aa10.42□□□□□ -0.74
HDAC1-208ENST00000482310 TENM1Q9UKZ4 2725 aa10.42□□□□□ -0.74
HDAC1-208ENST00000482310 NBEAL1Q6ZS30 2694 aa10.41□□□□□ -0.74
HDAC1-208ENST00000482310 A0A0B4J2A0 478 aa10.41□□□□□ -0.74
HDAC1-208ENST00000482310 A0A1W2PN81 502 aa10.41□□□□□ -0.74
HDAC1-208ENST00000482310 TMEM89A2RUT3 159 aa10.41□□□□□ -0.74
HDAC1-208ENST00000482310 MSGN1A6NI15 193 aa10.41□□□□□ -0.74
HDAC1-208ENST00000482310 C15orf61A6NNL5 157 aa10.41□□□□□ -0.74
HDAC1-208ENST00000482310 FAM25EA8MYX2 175 aa10.41□□□□□ -0.74
HDAC1-208ENST00000482310 E7EUB6 86 aa10.41□□□□□ -0.74
HDAC1-208ENST00000482310 DUS4LO95620 317 aaKnown RBP10.41□□□□□ -0.74
HDAC1-208ENST00000482310 DHFRP00374 187 aa10.41□□□□□ -0.74
HDAC1-208ENST00000482310 REG1AP05451 166 aa10.41□□□□□ -0.74
HDAC1-208ENST00000482310 CHRNA7P36544 502 aa10.41□□□□□ -0.74
HDAC1-208ENST00000482310 MECP2P51608 486 aaKnown RBP10.41□□□□□ -0.74
HDAC1-208ENST00000482310 SRSF4Q08170 494 aaKnown RBP10.41□□□□□ -0.74
HDAC1-208ENST00000482310 ZNF562Q6V9R5 426 aa10.41□□□□□ -0.74
HDAC1-208ENST00000482310 Q6ZRM9 215 aa10.41□□□□□ -0.74
HDAC1-208ENST00000482310 C19orf35Q6ZS72 473 aa10.41□□□□□ -0.74
HDAC1-208ENST00000482310 LCNL1Q6ZST4 164 aa10.41□□□□□ -0.74
HDAC1-208ENST00000482310 FAM219AQ8IW50 185 aa10.41□□□□□ -0.74
HDAC1-208ENST00000482310 OR5T1Q8NG75 326 aa10.41□□□□□ -0.74
HDAC1-208ENST00000482310 IL22RA2Q969J5 263 aa10.41□□□□□ -0.74
HDAC1-208ENST00000482310 MARVELD1Q9BSK0 173 aa10.41□□□□□ -0.74
HDAC1-208ENST00000482310 GPN1Q9HCN4 374 aaPredicted RBP10.41□□□□□ -0.74
HDAC1-208ENST00000482310 SHPKQ9UHJ6 478 aa10.41□□□□□ -0.74
HDAC1-208ENST00000482310 TRAV41A0A0B4J266 112 aa10.4□□□□□ -0.74
HDAC1-208ENST00000482310 A0A0B4J293 547 aa10.4□□□□□ -0.74
HDAC1-208ENST00000482310 TEX50A0A1B0GTY4 177 aa10.4□□□□□ -0.74
HDAC1-208ENST00000482310 A0A1B0GW64 132 aa10.4□□□□□ -0.74
HDAC1-208ENST00000482310 PSMB11A5LHX3 300 aa10.4□□□□□ -0.74
HDAC1-208ENST00000482310 ST8SIA3O43173 380 aa10.4□□□□□ -0.74
HDAC1-208ENST00000482310 IL6RP08887 468 aaPredicted RBP10.4□□□□□ -0.74
HDAC1-208ENST00000482310 P0C879 139 aa10.4□□□□□ -0.74
HDAC1-208ENST00000482310 EGR2P11161 476 aaPredicted RBP10.4□□□□□ -0.74
HDAC1-208ENST00000482310 KHDC1LQ5JSQ8 128 aa10.4□□□□□ -0.74
HDAC1-208ENST00000482310 GGNBP1Q5YKI7 109 aa10.4□□□□□ -0.74
HDAC1-208ENST00000482310 THOC7Q6I9Y2 204 aaKnown RBP10.4□□□□□ -0.74
HDAC1-208ENST00000482310 C12orf45Q8N5I9 185 aaPredicted RBP10.4□□□□□ -0.74
HDAC1-208ENST00000482310 OR10W1Q8NGF6 305 aa10.4□□□□□ -0.74
HDAC1-208ENST00000482310 MITD1Q8WV92 249 aa10.4□□□□□ -0.74
HDAC1-208ENST00000482310 PDCD10Q9BUL8 212 aa10.4□□□□□ -0.74
HDAC1-208ENST00000482310 ALX4Q9H161 411 aaPredicted RBP10.4□□□□□ -0.74
HDAC1-208ENST00000482310 ZNF355PQ9NSJ1 428 aa10.4□□□□□ -0.74
HDAC1-208ENST00000482310 PRNDQ9UKY0 176 aa10.4□□□□□ -0.74
HDAC1-208ENST00000482310 MPTX1A8MV57 137 aa10.39□□□□□ -0.75
HDAC1-208ENST00000482310 IFNA17P01571 189 aa10.39□□□□□ -0.75
HDAC1-208ENST00000482310 IL5P05113 134 aa10.39□□□□□ -0.75
HDAC1-208ENST00000482310 SULT1A3P0DMM9 295 aa10.39□□□□□ -0.75
HDAC1-208ENST00000482310 SULT1A4P0DMN0 295 aa10.39□□□□□ -0.75
HDAC1-208ENST00000482310 MAS1LP35410 378 aa10.39□□□□□ -0.75
HDAC1-208ENST00000482310 PROK1P58294 105 aa10.39□□□□□ -0.75
HDAC1-208ENST00000482310 DEFA5Q01523 94 aa10.39□□□□□ -0.75
HDAC1-208ENST00000482310 TATDN3Q17R31 274 aa10.39□□□□□ -0.75
HDAC1-208ENST00000482310 NMSQ5H8A3 153 aa10.39□□□□□ -0.75
HDAC1-208ENST00000482310 C12orf54Q6X4T0 127 aa10.39□□□□□ -0.75
HDAC1-208ENST00000482310 OR1L8Q8NGR8 309 aa10.39□□□□□ -0.75
HDAC1-208ENST00000482310 OR1S1Q8NH92 325 aa10.39□□□□□ -0.75
HDAC1-208ENST00000482310 SGMS2Q8NHU3 365 aa10.39□□□□□ -0.75
HDAC1-208ENST00000482310 CHPT1Q8WUD6 406 aa10.39□□□□□ -0.75
HDAC1-208ENST00000482310 LSM10Q969L4 123 aaKnown RBP10.39□□□□□ -0.75
HDAC1-208ENST00000482310 TMEM14BQ9NUH8 114 aa10.39□□□□□ -0.75
HDAC1-208ENST00000482310 COA4Q9NYJ1 87 aa10.39□□□□□ -0.75
HDAC1-208ENST00000482310 FOXA2Q9Y261 457 aaPredicted RBP10.39□□□□□ -0.75
HDAC1-208ENST00000482310 ALG5Q9Y673 324 aa10.39□□□□□ -0.75
HDAC1-208ENST00000482310 C13orf42A0A1B0GVH6 325 aa10.38□□□□□ -0.75
HDAC1-208ENST00000482310 DUXBA0A1W2PPF3 345 aa10.38□□□□□ -0.75
HDAC1-208ENST00000482310 CGB1A6NKQ9 187 aa10.38□□□□□ -0.75
HDAC1-208ENST00000482310 TEX22C9J3V5 150 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms