RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 DEFA4P12838 97 aa9.18□□□□□ -0.94
SQSTM1-207ENST00000481335 ARL3P36405 182 aa9.18□□□□□ -0.94
SQSTM1-207ENST00000481335 TAS2R46P59540 309 aa9.18□□□□□ -0.94
SQSTM1-207ENST00000481335 CD81P60033 236 aa9.18□□□□□ -0.94
SQSTM1-207ENST00000481335 HERV-K104P61576 105 aa9.18□□□□□ -0.94
SQSTM1-207ENST00000481335 HAGHQ16775 308 aa9.18□□□□□ -0.94
SQSTM1-207ENST00000481335 DEFB114Q30KQ6 69 aa9.18□□□□□ -0.94
SQSTM1-207ENST00000481335 CD300EQ496F6 205 aaPredicted RBP9.18□□□□□ -0.94
SQSTM1-207ENST00000481335 FAM106AQ4KMX7 169 aa9.18□□□□□ -0.94
SQSTM1-207ENST00000481335 DHRS11Q6UWP2 260 aa9.18□□□□□ -0.94
SQSTM1-207ENST00000481335 SSX9Q7RTT3 188 aa9.18□□□□□ -0.94
SQSTM1-207ENST00000481335 CCDC140Q96MF4 163 aa9.18□□□□□ -0.94
SQSTM1-207ENST00000481335 ATP6V0BQ99437 205 aa9.18□□□□□ -0.94
SQSTM1-207ENST00000481335 COMMD5Q9GZQ3 224 aa9.18□□□□□ -0.94
SQSTM1-207ENST00000481335 HRASLSQ9HDD0 168 aa9.18□□□□□ -0.94
SQSTM1-207ENST00000481335 IFT46Q9NQC8 304 aa9.18□□□□□ -0.94
SQSTM1-207ENST00000481335 IZUMO1RA6ND01 250 aa9.17□□□□□ -0.94
SQSTM1-207ENST00000481335 PPP5D1E7EU14 171 aa9.17□□□□□ -0.94
SQSTM1-207ENST00000481335 FOLR2P14207 255 aa9.17□□□□□ -0.94
SQSTM1-207ENST00000481335 AREGP15514 252 aa9.17□□□□□ -0.94
SQSTM1-207ENST00000481335 FXYD4P59646 89 aa9.17□□□□□ -0.94
SQSTM1-207ENST00000481335 OR2B8PP59922 312 aa9.17□□□□□ -0.94
SQSTM1-207ENST00000481335 ERVK-16P61578 105 aa9.17□□□□□ -0.94
SQSTM1-207ENST00000481335 TMEM69Q5SWH9 247 aa9.17□□□□□ -0.94
SQSTM1-207ENST00000481335 AADACL3Q5VUY0 350 aa9.17□□□□□ -0.94
SQSTM1-207ENST00000481335 ADAMTSL5Q6ZMM2 481 aa9.17□□□□□ -0.94
SQSTM1-207ENST00000481335 LINC00322Q6ZN03 302 aaPredicted RBP9.17□□□□□ -0.94
SQSTM1-207ENST00000481335 ZNF818PQ6ZRF7 136 aa9.17□□□□□ -0.94
SQSTM1-207ENST00000481335 MARC2Q969Z3 335 aa9.17□□□□□ -0.94
SQSTM1-207ENST00000481335 MOB3AQ96BX8 217 aa9.17□□□□□ -0.94
SQSTM1-207ENST00000481335 LYSTQ99698 3801 aa9.17□□□□□ -0.94
SQSTM1-207ENST00000481335 NEURL2Q9BR09 285 aa9.17□□□□□ -0.94
SQSTM1-207ENST00000481335 QTRT1Q9BXR0 403 aaKnown RBP9.17□□□□□ -0.94
SQSTM1-207ENST00000481335 FAM212BQ9NTI7 297 aaPredicted RBP9.17□□□□□ -0.94
SQSTM1-207ENST00000481335 EHFQ9NZC4 300 aa9.17□□□□□ -0.94
SQSTM1-207ENST00000481335 CEPT1Q9Y6K0 416 aa9.17□□□□□ -0.94
SQSTM1-207ENST00000481335 DYNC2H1Q8NCM8 4307 aaKnown RBP9.17□□□□□ -0.94
SQSTM1-207ENST00000481335 A0A087WXM4 84 aa9.16□□□□□ -0.94
SQSTM1-207ENST00000481335 IGLC7A0M8Q6 106 aa9.16□□□□□ -0.94
SQSTM1-207ENST00000481335 CGB1A6NKQ9 187 aa9.16□□□□□ -0.94
SQSTM1-207ENST00000481335 SULT1C2O00338 296 aa9.16□□□□□ -0.94
SQSTM1-207ENST00000481335 UPK2O00526 184 aa9.16□□□□□ -0.94
SQSTM1-207ENST00000481335 NDUFB8O95169 186 aa9.16□□□□□ -0.94
SQSTM1-207ENST00000481335 TNFAIP8O95379 198 aa9.16□□□□□ -0.94
SQSTM1-207ENST00000481335 NAT1P18440 290 aa9.16□□□□□ -0.94
SQSTM1-207ENST00000481335 GNRHRP30968 328 aa9.16□□□□□ -0.94
SQSTM1-207ENST00000481335 ELLP55199 621 aaPredicted RBP9.16□□□□□ -0.94
SQSTM1-207ENST00000481335 CLEC19AQ6UXS0 136 aa9.16□□□□□ -0.94
SQSTM1-207ENST00000481335 SLC16A13Q7RTY0 426 aa9.16□□□□□ -0.94
SQSTM1-207ENST00000481335 TMEM17Q86X19 198 aa9.16□□□□□ -0.94
SQSTM1-207ENST00000481335 CMTM1Q8IZ96 169 aa9.16□□□□□ -0.94
SQSTM1-207ENST00000481335 DMBX1Q8NFW5 382 aa9.16□□□□□ -0.94
SQSTM1-207ENST00000481335 OR51H1Q8NH63 302 aa9.16□□□□□ -0.94
SQSTM1-207ENST00000481335 IL17DQ8TAD2 202 aa9.16□□□□□ -0.94
SQSTM1-207ENST00000481335 CMTM3Q96MX0 182 aa9.16□□□□□ -0.94
SQSTM1-207ENST00000481335 TMEM140Q9NV12 185 aa9.16□□□□□ -0.94
SQSTM1-207ENST00000481335 STARD9Q9P2P6 4700 aa9.15□□□□□ -0.94
SQSTM1-207ENST00000481335 TRAV25A0A0B4J276 109 aa9.15□□□□□ -0.94
SQSTM1-207ENST00000481335 MARCH11A6NNE9 402 aa9.15□□□□□ -0.94
SQSTM1-207ENST00000481335 ZNF785A8K8V0 405 aa9.15□□□□□ -0.94
SQSTM1-207ENST00000481335 OR2C1O95371 312 aa9.15□□□□□ -0.94
SQSTM1-207ENST00000481335 PTHLHP12272 177 aa9.15□□□□□ -0.94
SQSTM1-207ENST00000481335 CBLN1P23435 193 aa9.15□□□□□ -0.94
SQSTM1-207ENST00000481335 F2RP25116 425 aa9.15□□□□□ -0.94
SQSTM1-207ENST00000481335 PTBP1P26599 531 aaKnown RBP eCLIP9.15□□□□□ -0.94
SQSTM1-207ENST00000481335 TAS2R20P59543 309 aa9.15□□□□□ -0.94
SQSTM1-207ENST00000481335 ANKRD55Q3KP44 614 aa9.15□□□□□ -0.94
SQSTM1-207ENST00000481335 ZNF57Q68EA5 555 aaPredicted RBP9.15□□□□□ -0.94
SQSTM1-207ENST00000481335 GDPD1Q8N9F7 314 aa9.15□□□□□ -0.94
SQSTM1-207ENST00000481335 OR5H2Q8NGV7 314 aa9.15□□□□□ -0.94
SQSTM1-207ENST00000481335 VN1R17PQ8TDU5 208 aa9.15□□□□□ -0.94
SQSTM1-207ENST00000481335 YIPF6Q96EC8 236 aa9.15□□□□□ -0.94
SQSTM1-207ENST00000481335 GPHA2Q96T91 129 aa9.15□□□□□ -0.94
SQSTM1-207ENST00000481335 TMEM213A2RRL7 107 aa9.14□□□□□ -0.95
SQSTM1-207ENST00000481335 S1PR2O95136 353 aa9.14□□□□□ -0.95
SQSTM1-207ENST00000481335 MYOD1P15172 320 aa9.14□□□□□ -0.95
SQSTM1-207ENST00000481335 S100GP29377 79 aa9.14□□□□□ -0.95
SQSTM1-207ENST00000481335 PRSS3P35030 304 aa9.14□□□□□ -0.95
SQSTM1-207ENST00000481335 RPS19P39019 145 aaKnown RBP9.14□□□□□ -0.95
SQSTM1-207ENST00000481335 LPCAT3Q6P1A2 487 aa9.14□□□□□ -0.95
SQSTM1-207ENST00000481335 SAMD12Q8N8I0 201 aa9.14□□□□□ -0.95
SQSTM1-207ENST00000481335 OR1L6Q8NGR2 347 aa9.14□□□□□ -0.95
SQSTM1-207ENST00000481335 OR1L8Q8NGR8 309 aa9.14□□□□□ -0.95
SQSTM1-207ENST00000481335 OR6F1Q8NGZ6 308 aa9.14□□□□□ -0.95
SQSTM1-207ENST00000481335 ZNF502Q8TBZ5 544 aa9.14□□□□□ -0.95
SQSTM1-207ENST00000481335 LSM10Q969L4 123 aaKnown RBP9.14□□□□□ -0.95
SQSTM1-207ENST00000481335 SLC25A46Q96AG3 418 aa9.14□□□□□ -0.95
SQSTM1-207ENST00000481335 TSC22D3Q99576 134 aa9.14□□□□□ -0.95
SQSTM1-207ENST00000481335 ZNF2Q9BSG1 426 aaPredicted RBP9.14□□□□□ -0.95
SQSTM1-207ENST00000481335 HIPK2Q9H2X6 1198 aa9.14□□□□□ -0.95
SQSTM1-207ENST00000481335 PLEKHA3Q9HB20 300 aa9.14□□□□□ -0.95
SQSTM1-207ENST00000481335 FKBP11Q9NYL4 201 aa9.14□□□□□ -0.95
SQSTM1-207ENST00000481335 MRPL27Q9P0M9 148 aaKnown RBP9.14□□□□□ -0.95
SQSTM1-207ENST00000481335 UFC1Q9Y3C8 167 aa9.14□□□□□ -0.95
SQSTM1-207ENST00000481335 TENM2Q9NT68 2774 aa9.14□□□□□ -0.95
SQSTM1-207ENST00000481335 LCE6AA0A183 80 aa9.13□□□□□ -0.95
SQSTM1-207ENST00000481335 MFSD2BA6NFX1 497 aa9.13□□□□□ -0.95
SQSTM1-207ENST00000481335 OR11H12B2RN74 326 aa9.13□□□□□ -0.95
SQSTM1-207ENST00000481335 GPR31O00270 319 aa9.13□□□□□ -0.95
SQSTM1-207ENST00000481335 PGLYRP1O75594 196 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms