RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 GON7Q9BXV9 100 aa9.73□□□□□ -0.85
SHROOM3-205ENST00000481002 TMEM14BQ9NUH8 114 aa9.73□□□□□ -0.85
SHROOM3-205ENST00000481002 PRR13Q9NZ81 148 aa9.73□□□□□ -0.85
SHROOM3-205ENST00000481002 SHPKQ9UHJ6 478 aa9.73□□□□□ -0.85
SHROOM3-205ENST00000481002 LINC00527Q9UJ94 153 aa9.73□□□□□ -0.85
SHROOM3-205ENST00000481002 A0A0G2JRQ6 117 aa9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 DUXBA0A1W2PPF3 345 aa9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 MSGN1A6NI15 193 aa9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 E7EUB6 86 aa9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 HAX1O00165 279 aa9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 PTTG1O95997 202 aa9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 HLA-AP01891 365 aaKnown RBP9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 IL5P05113 134 aa9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 VDAC1P21796 283 aa9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 PPIFP30405 207 aaKnown RBP9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 RPL27AP46776 148 aaKnown RBP9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 RAB25P57735 213 aa9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 CFHR3Q02985 330 aa9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 IZUMO4Q1ZYL8 232 aa9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 C4orf46Q504U0 113 aa9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 LYZL2Q7Z4W2 148 aa9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 SLC35G3Q8N808 338 aa9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 MINDY2Q8NBR6 621 aa9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 CASTOR1Q8WTX7 329 aa9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 WFDC12Q8WWY7 111 aa9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 GPR146Q96CH1 333 aa9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 TMEM68Q96MH6 324 aa9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 FAM103A1Q9BTL3 118 aaKnown RBP9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 FKBP11Q9NYL4 201 aa9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 PRNDQ9UKY0 176 aa9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 NSG2Q9Y328 171 aa9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 WSB1Q9Y6I7 421 aa9.72□□□□□ -0.85
SHROOM3-205ENST00000481002 TRAV41A0A0B4J266 112 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 A0A0B4J293 547 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 TEX50A0A1B0GTY4 177 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 A0A1B0GW64 132 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 PSMB11A5LHX3 300 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 CGB1A6NKQ9 187 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 C15orf61A6NNL5 157 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 INMT-MINDY4F8WBC2 141 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 G3V318 75 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 MYOD1P15172 320 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 SPNP16150 400 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 OR2B8PP59922 312 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 KRTAP10-3P60369 221 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 SLC35B1P78383 322 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 NMSQ5H8A3 153 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 C10orf55Q5SWW7 151 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 C12orf54Q6X4T0 127 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 Q6ZRM9 215 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 ZNF429Q86V71 674 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 LFNGQ8NES3 379 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 OR5AU1Q8NGC0 362 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 OR1L8Q8NGR8 309 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 OR4A16Q8NH70 328 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 GRPEL2Q8TAA5 225 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 ABHD5Q8WTS1 349 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 MITD1Q8WV92 249 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 SPIN2AQ99865 258 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 SPIN2BQ9BPZ2 258 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 ZNF747Q9BV97 191 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 COMMD5Q9GZQ3 224 aa9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 FOXA2Q9Y261 457 aaPredicted RBP9.71□□□□□ -0.86
SHROOM3-205ENST00000481002 DBX1A6NMT0 343 aa9.7□□□□□ -0.86
SHROOM3-205ENST00000481002 TEX22C9J3V5 150 aa9.7□□□□□ -0.86
SHROOM3-205ENST00000481002 IGLV1-40P01703 118 aa9.7□□□□□ -0.86
SHROOM3-205ENST00000481002 IGHG4P01861 327 aa9.7□□□□□ -0.86
SHROOM3-205ENST00000481002 AARDQ4LEZ3 155 aa9.7□□□□□ -0.86
SHROOM3-205ENST00000481002 ASPHD1Q5U4P2 390 aa9.7□□□□□ -0.86
SHROOM3-205ENST00000481002 UNQ5815/PRO19632Q6UWF5 114 aa9.7□□□□□ -0.86
SHROOM3-205ENST00000481002 C10orf99Q6UWK7 81 aa9.7□□□□□ -0.86
SHROOM3-205ENST00000481002 ZNF329Q86UD4 541 aa9.7□□□□□ -0.86
SHROOM3-205ENST00000481002 COMMD1Q8N668 190 aa9.7□□□□□ -0.86
SHROOM3-205ENST00000481002 OR52B4Q8NGK2 314 aa9.7□□□□□ -0.86
SHROOM3-205ENST00000481002 OR5B3Q8NH48 314 aa9.7□□□□□ -0.86
SHROOM3-205ENST00000481002 COQ8AQ8NI60 647 aa9.7□□□□□ -0.86
SHROOM3-205ENST00000481002 RNASE11Q8TAA1 199 aaKnown RBP9.7□□□□□ -0.86
SHROOM3-205ENST00000481002 ZNF431Q8TF32 576 aaPredicted RBP9.7□□□□□ -0.86
SHROOM3-205ENST00000481002 SRSF8Q9BRL6 282 aaKnown RBP9.7□□□□□ -0.86
SHROOM3-205ENST00000481002 SEC22CQ9BRL7 303 aa9.7□□□□□ -0.86
SHROOM3-205ENST00000481002 NDUFA4L2Q9NRX3 87 aa9.7□□□□□ -0.86
SHROOM3-205ENST00000481002 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.7□□□□□ -0.86
SHROOM3-205ENST00000481002 ZNF257Q9Y2Q1 563 aa9.7□□□□□ -0.86
SHROOM3-205ENST00000481002 TMED3Q9Y3Q3 217 aa9.7□□□□□ -0.86
SHROOM3-205ENST00000481002 OR51B2Q9Y5P1 312 aa9.7□□□□□ -0.86
SHROOM3-205ENST00000481002 A0A1B0GU03 582 aa9.69□□□□□ -0.86
SHROOM3-205ENST00000481002 PRAF2O60831 178 aa9.69□□□□□ -0.86
SHROOM3-205ENST00000481002 OPN1MWP04001 364 aa9.69□□□□□ -0.86
SHROOM3-205ENST00000481002 ELANEP08246 267 aa9.69□□□□□ -0.86
SHROOM3-205ENST00000481002 TRAPPC2P0DI81 140 aa9.69□□□□□ -0.86
SHROOM3-205ENST00000481002 TRAPPC2BP0DI82 140 aa9.69□□□□□ -0.86
SHROOM3-205ENST00000481002 OPN1MW2P0DN77 364 aa9.69□□□□□ -0.86
SHROOM3-205ENST00000481002 OPN1MW3P0DN78 364 aa9.69□□□□□ -0.86
SHROOM3-205ENST00000481002 SLC25A6P12236 298 aa9.69□□□□□ -0.86
SHROOM3-205ENST00000481002 HSPE1P61604 102 aaKnown RBP9.69□□□□□ -0.86
SHROOM3-205ENST00000481002 ECSCRQ19T08 205 aa9.69□□□□□ -0.86
SHROOM3-205ENST00000481002 THOC7Q6I9Y2 204 aaKnown RBP9.69□□□□□ -0.86
SHROOM3-205ENST00000481002 TEX38Q6PEX7 206 aa9.69□□□□□ -0.86
SHROOM3-205ENST00000481002 C3orf56Q8N813 242 aa9.69□□□□□ -0.86
SHROOM3-205ENST00000481002 RNF152Q8N8N0 203 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms