RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 CCDC121Q6ZUS5 278 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 SSX9Q7RTT3 188 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 MRPL21Q7Z2W9 205 aaKnown RBP3.54□□□□□ -1.84
UPF3A-205ENST00000479712 GID4Q8IVV7 300 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 OR2Z1Q8NG97 314 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 OR9Q1Q8NGQ5 310 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 OR6K6Q8NGW6 343 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 OR6N2Q8NGY6 317 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 TEAD3Q99594 435 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 COPS4Q9BT78 406 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 GABARAPL3Q9BY60 117 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 AUNIPQ9H7T9 357 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 PATZ1Q9HBE1 687 aaKnown RBP3.54□□□□□ -1.84
UPF3A-205ENST00000479712 USE1Q9NZ43 259 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 GOLT1BQ9Y3E0 138 aa3.54□□□□□ -1.84
UPF3A-205ENST00000479712 DNAH17Q9UFH2 4485 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 GGT3PA6NGU5 568 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 FAM183AA6NL82 134 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 PEX7O00628 323 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 NDUFA2O43678 99 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 CST4P01036 141 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 GYPBP06028 91 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 IGHV3-43DP0DP04 118 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 PSKH1P11801 424 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 RCC1P18754 421 aaPredicted RBP3.53□□□□□ -1.84
UPF3A-205ENST00000479712 DCKP27707 260 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 HSD11B1P28845 292 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 CX3CR1P49238 355 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 ERFP50548 548 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 ADARB1P78563 741 aaKnown RBP3.53□□□□□ -1.84
UPF3A-205ENST00000479712 KCNJ8Q15842 424 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 GLYATL3Q5SZD4 288 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 LINC00336Q6ZUF6 198 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 NDUFA11Q86Y39 141 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 HS3ST5Q8IZT8 346 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 BPIFCQ8NFQ6 507 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 OR51L1Q8NGJ5 315 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 OR11L1Q8NGX0 322 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 OR10R2Q8NGX6 335 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 OR10Z1Q8NGY1 313 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 CCL17Q92583 94 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 RDH12Q96NR8 316 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 OR2V2Q96R30 315 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 P2RX4Q99571 388 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 TLNRD1Q9H1K6 362 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 OR51V1Q9H2C8 321 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 C8orf4Q9NR00 106 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 TVP23BQ9NYZ1 205 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 MPC1Q9Y5U8 109 aa3.53□□□□□ -1.84
UPF3A-205ENST00000479712 TANC2Q9HCD6 1990 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 LRP2P98164 4655 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 TMEM210A6NLX4 147 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 F5H5P2 479 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 SULT1C4O75897 302 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 IGLV3-1P01715 115 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 RPSAP08865 295 aaKnown RBP3.52□□□□□ -1.85
UPF3A-205ENST00000479712 RPS27P42677 84 aaKnown RBP3.52□□□□□ -1.85
UPF3A-205ENST00000479712 ZNF121P58317 390 aaPredicted RBP3.52□□□□□ -1.85
UPF3A-205ENST00000479712 CDC42P60953 191 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 NUTF2P61970 127 aaKnown RBP3.52□□□□□ -1.85
UPF3A-205ENST00000479712 SNRPGP62308 76 aaKnown RBP3.52□□□□□ -1.85
UPF3A-205ENST00000479712 FAM3AP98173 230 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 IL5RAQ01344 420 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 MAB21L1Q13394 359 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 APOFQ13790 326 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 CLINT1Q14677 625 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 PSG5Q15238 335 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 OR8G1Q15617 311 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 GUCA2BQ16661 112 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 ZNF829Q3KNS6 432 aaPredicted RBP3.52□□□□□ -1.85
UPF3A-205ENST00000479712 ZNF404Q494X3 552 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 KLHL12Q53G59 568 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 TEX36Q5VZQ5 186 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 CAMK2N1Q7Z7J9 78 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 NAA40Q86UY6 237 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 TMEM86BQ8N661 226 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 COMMD1Q8N668 190 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 HAVCR2Q8TDQ0 301 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 CAPSLQ8WWF8 208 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 C12orf43Q96C57 262 aaKnown RBP3.52□□□□□ -1.85
UPF3A-205ENST00000479712 REEP6Q96HR9 211 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 AMELYQ99218 206 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 CIB1Q99828 191 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 MICU1Q9BPX6 476 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 ADAT1Q9BUB4 502 aaKnown RBP3.52□□□□□ -1.85
UPF3A-205ENST00000479712 MROQ9BYG7 248 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 DNTTIP1Q9H147 329 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 TMEM165Q9HC07 324 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 CLN6Q9NWW5 311 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 KAAG1Q9UBP8 84 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 CELA1Q9UNI1 258 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 ORC6Q9Y5N6 252 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 CACNG2Q9Y698 323 aa3.52□□□□□ -1.85
UPF3A-205ENST00000479712 TRBV9A0A0B4J1U6 114 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 TRAV39A0A0B4J263 110 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 TRAV38-1A0A0B4J264 116 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 KIR2DS1A0A191URI9 304 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 TMEM269A0A1B0GVZ9 245 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 ISPDA4D126 451 aa3.51□□□□□ -1.85
UPF3A-205ENST00000479712 CEACAM18A8MTB9 384 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms