RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 AURKAIP1Q9NWT8 199 aaPredicted RBP11□□□□□ -0.65
VAMP4-203ENST00000474047 MARCH11A6NNE9 402 aa10.99□□□□□ -0.65
VAMP4-203ENST00000474047 DISC1C4P0D8 188 aa10.99□□□□□ -0.65
VAMP4-203ENST00000474047 UPK2O00526 184 aa10.99□□□□□ -0.65
VAMP4-203ENST00000474047 CTDSPLO15194 276 aa10.99□□□□□ -0.65
VAMP4-203ENST00000474047 BRI3O95415 125 aa10.99□□□□□ -0.65
VAMP4-203ENST00000474047 DHFRP00374 187 aa10.99□□□□□ -0.65
VAMP4-203ENST00000474047 PRH1P02810 166 aa10.99□□□□□ -0.65
VAMP4-203ENST00000474047 ATP5G2Q06055 141 aa10.99□□□□□ -0.65
VAMP4-203ENST00000474047 MEF2DQ14814 521 aa10.99□□□□□ -0.65
VAMP4-203ENST00000474047 POU2AF1Q16633 256 aa10.99□□□□□ -0.65
VAMP4-203ENST00000474047 TERB2Q8NHR7 220 aa10.99□□□□□ -0.65
VAMP4-203ENST00000474047 SLC2A9Q9NRM0 540 aa10.99□□□□□ -0.65
VAMP4-203ENST00000474047 ZNF257Q9Y2Q1 563 aa10.99□□□□□ -0.65
VAMP4-203ENST00000474047 FAM223BA6NKX1 122 aa10.98□□□□□ -0.65
VAMP4-203ENST00000474047 CD74P04233 296 aa10.98□□□□□ -0.65
VAMP4-203ENST00000474047 SERPINE2P07093 398 aa10.98□□□□□ -0.65
VAMP4-203ENST00000474047 IL6RP08887 468 aaPredicted RBP10.98□□□□□ -0.65
VAMP4-203ENST00000474047 ZNF735P0CB33 412 aa10.98□□□□□ -0.65
VAMP4-203ENST00000474047 AKAIN1P0CW23 69 aa10.98□□□□□ -0.65
VAMP4-203ENST00000474047 DEFA4P12838 97 aa10.98□□□□□ -0.65
VAMP4-203ENST00000474047 G6PCP35575 357 aa10.98□□□□□ -0.65
VAMP4-203ENST00000474047 RHOGP84095 191 aa10.98□□□□□ -0.65
VAMP4-203ENST00000474047 DEFA5Q01523 94 aa10.98□□□□□ -0.65
VAMP4-203ENST00000474047 FAM223AQ8IWN6 122 aa10.98□□□□□ -0.65
VAMP4-203ENST00000474047 OR4D10Q8NGI6 311 aa10.98□□□□□ -0.65
VAMP4-203ENST00000474047 DLX4Q92988 240 aaPredicted RBP10.98□□□□□ -0.65
VAMP4-203ENST00000474047 ZNF486Q96H40 463 aaPredicted RBP10.98□□□□□ -0.65
VAMP4-203ENST00000474047 COPZ2Q9P299 210 aa10.98□□□□□ -0.65
VAMP4-203ENST00000474047 TRAV3A0A0B4J244 114 aa10.98□□□□□ -0.65
VAMP4-203ENST00000474047 MYOD1P15172 320 aa10.98□□□□□ -0.65
VAMP4-203ENST00000474047 PI3P19957 117 aa10.98□□□□□ -0.65
VAMP4-203ENST00000474047 ZP3P21754 424 aa10.98□□□□□ -0.65
VAMP4-203ENST00000474047 PIGPP57054 158 aa10.98□□□□□ -0.65
VAMP4-203ENST00000474047 HINT2Q9BX68 163 aa10.98□□□□□ -0.65
VAMP4-203ENST00000474047 NXF2Q9GZY0 626 aaKnown RBP10.98□□□□□ -0.65
VAMP4-203ENST00000474047 AKIP1Q9NQ31 210 aa10.98□□□□□ -0.65
VAMP4-203ENST00000474047 FAM212BQ9NTI7 297 aaPredicted RBP10.98□□□□□ -0.65
VAMP4-203ENST00000474047 PEF1Q9UBV8 284 aaKnown RBP10.98□□□□□ -0.65
VAMP4-203ENST00000474047 NPIPB5A8MRT5 1133 aa10.97□□□□□ -0.65
VAMP4-203ENST00000474047 TEX22C9J3V5 150 aa10.97□□□□□ -0.65
VAMP4-203ENST00000474047 E7EUB6 86 aa10.97□□□□□ -0.65
VAMP4-203ENST00000474047 KRTAP10-11P60412 298 aa10.97□□□□□ -0.65
VAMP4-203ENST00000474047 EGFEM1PQ0D2K5 195 aa10.97□□□□□ -0.65
VAMP4-203ENST00000474047 ZNF585BQ52M93 769 aa10.97□□□□□ -0.65
VAMP4-203ENST00000474047 DEFB121Q5J5C9 76 aa10.97□□□□□ -0.65
VAMP4-203ENST00000474047 H2BFWTQ7Z2G1 175 aa10.97□□□□□ -0.65
VAMP4-203ENST00000474047 CCDC71LQ8N9Z2 235 aa10.97□□□□□ -0.65
VAMP4-203ENST00000474047 NECAP1Q8NC96 275 aa10.97□□□□□ -0.65
VAMP4-203ENST00000474047 C14orf166Q9Y224 244 aaKnown RBP10.97□□□□□ -0.65
VAMP4-203ENST00000474047 ZNF701M0R085 212 aaPredicted RBP10.96□□□□□ -0.65
VAMP4-203ENST00000474047 GSTZ1O43708 216 aaPredicted RBP10.96□□□□□ -0.65
VAMP4-203ENST00000474047 SAP30O75446 220 aa10.96□□□□□ -0.65
VAMP4-203ENST00000474047 OR2J3O76001 311 aa10.96□□□□□ -0.65
VAMP4-203ENST00000474047 REG1AP05451 166 aa10.96□□□□□ -0.65
VAMP4-203ENST00000474047 TRAPPC2P0DI81 140 aa10.96□□□□□ -0.65
VAMP4-203ENST00000474047 TRAPPC2BP0DI82 140 aa10.96□□□□□ -0.65
VAMP4-203ENST00000474047 AREGP15514 252 aa10.96□□□□□ -0.65
VAMP4-203ENST00000474047 PSMB6P28072 239 aa10.96□□□□□ -0.65
VAMP4-203ENST00000474047 ECI1P42126 302 aa10.96□□□□□ -0.65
VAMP4-203ENST00000474047 INSL3P51460 131 aa10.96□□□□□ -0.65
VAMP4-203ENST00000474047 OR2B8PP59922 312 aa10.96□□□□□ -0.65
VAMP4-203ENST00000474047 EXOSC2Q13868 293 aaKnown RBP10.96□□□□□ -0.65
VAMP4-203ENST00000474047 PYDC2Q56P42 97 aa10.96□□□□□ -0.65
VAMP4-203ENST00000474047 FAAP20Q6NZ36 180 aa10.96□□□□□ -0.65
VAMP4-203ENST00000474047 ZNF343Q6P1L6 599 aa10.96□□□□□ -0.65
VAMP4-203ENST00000474047 LHFPL1Q86WI0 220 aa10.96□□□□□ -0.65
VAMP4-203ENST00000474047 OR1L8Q8NGR8 309 aa10.96□□□□□ -0.65
VAMP4-203ENST00000474047 MARCH1Q8TCQ1 289 aa10.96□□□□□ -0.65
VAMP4-203ENST00000474047 TSC22D3Q99576 134 aa10.96□□□□□ -0.65
VAMP4-203ENST00000474047 ELOVL1Q9BW60 279 aa10.96□□□□□ -0.65
VAMP4-203ENST00000474047 QTRT1Q9BXR0 403 aaKnown RBP10.96□□□□□ -0.65
VAMP4-203ENST00000474047 FKBP11Q9NYL4 201 aa10.96□□□□□ -0.65
VAMP4-203ENST00000474047 FBXL7Q9UJT9 491 aa10.96□□□□□ -0.65
VAMP4-203ENST00000474047 CYB5BO43169 146 aa10.95□□□□□ -0.66
VAMP4-203ENST00000474047 RBMXL2O75526 392 aaKnown RBP10.95□□□□□ -0.66
VAMP4-203ENST00000474047 HIST1H1BP16401 226 aaKnown RBP10.95□□□□□ -0.66
VAMP4-203ENST00000474047 RND3P61587 244 aa10.95□□□□□ -0.66
VAMP4-203ENST00000474047 TATDN3Q17R31 274 aa10.95□□□□□ -0.66
VAMP4-203ENST00000474047 C15orf32Q32M92 178 aa10.95□□□□□ -0.66
VAMP4-203ENST00000474047 ZNF429Q86V71 674 aa10.95□□□□□ -0.66
VAMP4-203ENST00000474047 OR13C8Q8NGS7 320 aa10.95□□□□□ -0.66
VAMP4-203ENST00000474047 OR4A16Q8NH70 328 aa10.95□□□□□ -0.66
VAMP4-203ENST00000474047 OR4C12Q96R67 309 aa10.95□□□□□ -0.66
VAMP4-203ENST00000474047 PRRT1Q99946 306 aa10.95□□□□□ -0.66
VAMP4-203ENST00000474047 RBM38Q9H0Z9 239 aaKnown RBP10.95□□□□□ -0.66
VAMP4-203ENST00000474047 PRNDQ9UKY0 176 aa10.95□□□□□ -0.66
VAMP4-203ENST00000474047 NSG2Q9Y328 171 aa10.95□□□□□ -0.66
VAMP4-203ENST00000474047 OR51B2Q9Y5P1 312 aa10.95□□□□□ -0.66
VAMP4-203ENST00000474047 TRBV9A0A0B4J1U6 114 aa10.95□□□□□ -0.66
VAMP4-203ENST00000474047 TEX50A0A1B0GTY4 177 aa10.95□□□□□ -0.66
VAMP4-203ENST00000474047 ATG12O94817 140 aa10.95□□□□□ -0.66
VAMP4-203ENST00000474047 FGF2P09038 288 aa10.95□□□□□ -0.66
VAMP4-203ENST00000474047 MECP2P51608 486 aaKnown RBP10.95□□□□□ -0.66
VAMP4-203ENST00000474047 ZNF45Q02386 682 aa10.95□□□□□ -0.66
VAMP4-203ENST00000474047 RPEL1Q2QD12 228 aa10.95□□□□□ -0.66
VAMP4-203ENST00000474047 THOC7Q6I9Y2 204 aaKnown RBP10.95□□□□□ -0.66
VAMP4-203ENST00000474047 OR4C16Q8NGL9 310 aa10.95□□□□□ -0.66
VAMP4-203ENST00000474047 SRSF8Q9BRL6 282 aaKnown RBP10.95□□□□□ -0.66
VAMP4-203ENST00000474047 THAP7Q9BT49 309 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms