RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 LINC01619G3V211 115 aa14.6□□□□□ -0.07
PTCD3-210ENST00000473829 GSTZ1O43708 216 aaPredicted RBP14.6□□□□□ -0.07
PTCD3-210ENST00000473829 PGAM2P15259 253 aa14.6□□□□□ -0.07
PTCD3-210ENST00000473829 AREGP15514 252 aa14.6□□□□□ -0.07
PTCD3-210ENST00000473829 EGFEM1PQ0D2K5 195 aa14.6□□□□□ -0.07
PTCD3-210ENST00000473829 TTC9CQ8N5M4 171 aa14.6□□□□□ -0.07
PTCD3-210ENST00000473829 DCUN1D4Q92564 292 aa14.6□□□□□ -0.07
PTCD3-210ENST00000473829 AIFM2Q9BRQ8 373 aa14.6□□□□□ -0.07
PTCD3-210ENST00000473829 MCRIP2Q9BUT9 160 aaKnown RBP14.6□□□□□ -0.07
PTCD3-210ENST00000473829 RABL2AQ9UBK7 228 aaPredicted RBP14.6□□□□□ -0.07
PTCD3-210ENST00000473829 RABL2BQ9UNT1 228 aa14.6□□□□□ -0.07
PTCD3-210ENST00000473829 C13orf42A0A1B0GVH6 325 aa14.59□□□□□ -0.07
PTCD3-210ENST00000473829 ZNF701M0R085 212 aaPredicted RBP14.59□□□□□ -0.07
PTCD3-210ENST00000473829 IGKV1-39P01597 117 aa14.59□□□□□ -0.07
PTCD3-210ENST00000473829 IGKV1D-39P04432 117 aa14.59□□□□□ -0.07
PTCD3-210ENST00000473829 G6PCP35575 357 aa14.59□□□□□ -0.07
PTCD3-210ENST00000473829 OR2B8PP59922 312 aa14.59□□□□□ -0.07
PTCD3-210ENST00000473829 SCGB2B2Q4G0G5 96 aa14.59□□□□□ -0.07
PTCD3-210ENST00000473829 OR4C16Q8NGL9 310 aa14.59□□□□□ -0.07
PTCD3-210ENST00000473829 DPF1Q92782 380 aa14.59□□□□□ -0.07
PTCD3-210ENST00000473829 DLX4Q92988 240 aaPredicted RBP14.59□□□□□ -0.07
PTCD3-210ENST00000473829 V9GYH0 126 aa14.59□□□□□ -0.07
PTCD3-210ENST00000473829 TRBV9A0A0B4J1U6 114 aa14.58□□□□□ -0.08
PTCD3-210ENST00000473829 FABP12A6NFH5 140 aa14.58□□□□□ -0.08
PTCD3-210ENST00000473829 KRASP01116 189 aa14.58□□□□□ -0.08
PTCD3-210ENST00000473829 HSPB1P04792 205 aaKnown RBP14.58□□□□□ -0.08
PTCD3-210ENST00000473829 ERVK-16P61578 105 aa14.58□□□□□ -0.08
PTCD3-210ENST00000473829 RND3P61587 244 aa14.58□□□□□ -0.08
PTCD3-210ENST00000473829 RHOGP84095 191 aa14.58□□□□□ -0.08
PTCD3-210ENST00000473829 OR13C8Q8NGS7 320 aa14.58□□□□□ -0.08
PTCD3-210ENST00000473829 TERB2Q8NHR7 220 aa14.58□□□□□ -0.08
PTCD3-210ENST00000473829 AKIP1Q9NQ31 210 aa14.58□□□□□ -0.08
PTCD3-210ENST00000473829 A0A0G2JLM5 398 aa14.57□□□□□ -0.08
PTCD3-210ENST00000473829 ANKRD20A5PA0PJZ0 165 aa14.57□□□□□ -0.08
PTCD3-210ENST00000473829 ANKRD34BA5PLL1 514 aa14.57□□□□□ -0.08
PTCD3-210ENST00000473829 NPIPB5A8MRT5 1133 aa14.57□□□□□ -0.08
PTCD3-210ENST00000473829 SEC14L6B5MCN3 397 aa14.57□□□□□ -0.08
PTCD3-210ENST00000473829 TRBV12-3P01733 135 aa14.57□□□□□ -0.08
PTCD3-210ENST00000473829 REG1AP05451 166 aa14.57□□□□□ -0.08
PTCD3-210ENST00000473829 AKAIN1P0CW23 69 aa14.57□□□□□ -0.08
PTCD3-210ENST00000473829 S100GP29377 79 aa14.57□□□□□ -0.08
PTCD3-210ENST00000473829 PIGPP57054 158 aa14.57□□□□□ -0.08
PTCD3-210ENST00000473829 MEF2DQ14814 521 aa14.57□□□□□ -0.08
PTCD3-210ENST00000473829 MARCH1Q8TCQ1 289 aa14.57□□□□□ -0.08
PTCD3-210ENST00000473829 ZNF486Q96H40 463 aaPredicted RBP14.57□□□□□ -0.08
PTCD3-210ENST00000473829 GPR61Q9BZJ8 451 aa14.57□□□□□ -0.08
PTCD3-210ENST00000473829 FAM212BQ9NTI7 297 aaPredicted RBP14.57□□□□□ -0.08
PTCD3-210ENST00000473829 ZNF257Q9Y2Q1 563 aa14.57□□□□□ -0.08
PTCD3-210ENST00000473829 NSG2Q9Y328 171 aa14.57□□□□□ -0.08
PTCD3-210ENST00000473829 IGLC7A0M8Q6 106 aa14.56□□□□□ -0.08
PTCD3-210ENST00000473829 OVOL1O14753 267 aa14.56□□□□□ -0.08
PTCD3-210ENST00000473829 PTBP1P26599 531 aaKnown RBP eCLIP14.56□□□□□ -0.08
PTCD3-210ENST00000473829 ZNF79Q15937 498 aa14.56□□□□□ -0.08
PTCD3-210ENST00000473829 ZNF343Q6P1L6 599 aa14.56□□□□□ -0.08
PTCD3-210ENST00000473829 REC114Q7Z4M0 266 aa14.56□□□□□ -0.08
PTCD3-210ENST00000473829 USMG5Q96IX5 58 aa14.56□□□□□ -0.08
PTCD3-210ENST00000473829 TP53RKQ96S44 253 aa14.56□□□□□ -0.08
PTCD3-210ENST00000473829 FAM223BA6NKX1 122 aa14.55□□□□□ -0.08
PTCD3-210ENST00000473829 DBX1A6NMT0 343 aa14.55□□□□□ -0.08
PTCD3-210ENST00000473829 OR2J3O76001 311 aa14.55□□□□□ -0.08
PTCD3-210ENST00000473829 CRYGCP07315 174 aa14.55□□□□□ -0.08
PTCD3-210ENST00000473829 FGF2P09038 288 aa14.55□□□□□ -0.08
PTCD3-210ENST00000473829 CTRB1P17538 263 aa14.55□□□□□ -0.08
PTCD3-210ENST00000473829 PSMB6P28072 239 aa14.55□□□□□ -0.08
PTCD3-210ENST00000473829 C9orf66Q5T8R8 295 aa14.55□□□□□ -0.08
PTCD3-210ENST00000473829 CTRB2Q6GPI1 263 aa14.55□□□□□ -0.08
PTCD3-210ENST00000473829 SLC25A42Q86VD7 318 aa14.55□□□□□ -0.08
PTCD3-210ENST00000473829 FAM223AQ8IWN6 122 aa14.55□□□□□ -0.08
PTCD3-210ENST00000473829 OR10W1Q8NGF6 305 aa14.55□□□□□ -0.08
PTCD3-210ENST00000473829 TRIM63Q969Q1 353 aa14.55□□□□□ -0.08
PTCD3-210ENST00000473829 SEC22AQ96IW7 307 aa14.55□□□□□ -0.08
PTCD3-210ENST00000473829 FANCD2OSQ96PS1 177 aa14.55□□□□□ -0.08
PTCD3-210ENST00000473829 COMMD5Q9GZQ3 224 aa14.55□□□□□ -0.08
PTCD3-210ENST00000473829 TGP01266 2768 aa14.54□□□□□ -0.08
PTCD3-210ENST00000473829 TEX50A0A1B0GTY4 177 aa14.54□□□□□ -0.08
PTCD3-210ENST00000473829 WI2-2373I1.2A0A1W2PRP0 233 aa14.54□□□□□ -0.08
PTCD3-210ENST00000473829 DPPA5A6NC42 116 aa14.54□□□□□ -0.08
PTCD3-210ENST00000473829 DISC1C4P0D8 188 aa14.54□□□□□ -0.08
PTCD3-210ENST00000473829 H0Y980 276 aa14.54□□□□□ -0.08
PTCD3-210ENST00000473829 K7EIL1 84 aa14.54□□□□□ -0.08
PTCD3-210ENST00000473829 EXOSC2Q13868 293 aaKnown RBP14.54□□□□□ -0.08
PTCD3-210ENST00000473829 CCDC190Q86UF4 302 aa14.54□□□□□ -0.08
PTCD3-210ENST00000473829 CADM3Q8N126 398 aa14.54□□□□□ -0.08
PTCD3-210ENST00000473829 OR51S1Q8NGJ8 323 aa14.54□□□□□ -0.08
PTCD3-210ENST00000473829 QTRT1Q9BXR0 403 aaKnown RBP14.54□□□□□ -0.08
PTCD3-210ENST00000473829 RANGRFQ9HD47 186 aaPredicted RBP14.54□□□□□ -0.08
PTCD3-210ENST00000473829 CTSDP07339 412 aaPredicted RBP14.53□□□□□ -0.08
PTCD3-210ENST00000473829 NECAP1Q8NC96 275 aa14.53□□□□□ -0.08
PTCD3-210ENST00000473829 ZFAND1Q8TCF1 268 aa14.53□□□□□ -0.08
PTCD3-210ENST00000473829 MRAPQ8TCY5 172 aa14.53□□□□□ -0.08
PTCD3-210ENST00000473829 RTBDNQ9BSG5 229 aaPredicted RBP14.53□□□□□ -0.08
PTCD3-210ENST00000473829 THAP7Q9BT49 309 aaPredicted RBP14.53□□□□□ -0.08
PTCD3-210ENST00000473829 PEF1Q9UBV8 284 aaKnown RBP14.53□□□□□ -0.08
PTCD3-210ENST00000473829 DMRT1Q9Y5R6 373 aa14.53□□□□□ -0.08
PTCD3-210ENST00000473829 C3orf85A0A1B0GTC6 90 aa14.52□□□□□ -0.09
PTCD3-210ENST00000473829 SERPINE2P07093 398 aa14.52□□□□□ -0.09
PTCD3-210ENST00000473829 S100A5P33763 92 aa14.52□□□□□ -0.09
PTCD3-210ENST00000473829 ATP5G2Q06055 141 aa14.52□□□□□ -0.09
PTCD3-210ENST00000473829 WT1-ASQ06250 92 aa14.52□□□□□ -0.09
PTCD3-210ENST00000473829 IZUMO4Q1ZYL8 232 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms