RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 WFIKKN1Q96NZ8 548 aa9.04□□□□□ -0.96
C9orf3-214ENST00000473778 TANC2Q9HCD6 1990 aa9.04□□□□□ -0.96
C9orf3-214ENST00000473778 PARD6AQ9NPB6 346 aa9.04□□□□□ -0.96
C9orf3-214ENST00000473778 GNG12Q9UBI6 72 aa9.04□□□□□ -0.96
C9orf3-214ENST00000473778 ARFGEF3Q5TH69 2177 aa9.03□□□□□ -0.96
C9orf3-214ENST00000473778 RAI1Q7Z5J4 1906 aaPredicted RBP9.03□□□□□ -0.96
C9orf3-214ENST00000473778 SRRM5B3KS81 715 aa9.03□□□□□ -0.96
C9orf3-214ENST00000473778 M0R296 226 aa9.03□□□□□ -0.96
C9orf3-214ENST00000473778 ARL14EPLP0DKL9 152 aa9.03□□□□□ -0.96
C9orf3-214ENST00000473778 MYOD1P15172 320 aa9.03□□□□□ -0.96
C9orf3-214ENST00000473778 HOXC12P31275 282 aa9.03□□□□□ -0.96
C9orf3-214ENST00000473778 ZNF718Q3SXZ3 478 aa9.03□□□□□ -0.96
C9orf3-214ENST00000473778 PRAMEF5Q5TYX0 476 aa9.03□□□□□ -0.96
C9orf3-214ENST00000473778 CST9LP1Q5W188 147 aa9.03□□□□□ -0.96
C9orf3-214ENST00000473778 MRPL52Q86TS9 123 aaKnown RBP9.03□□□□□ -0.96
C9orf3-214ENST00000473778 TCTEX1D1Q8N7M0 179 aa9.03□□□□□ -0.96
C9orf3-214ENST00000473778 STARD4Q96DR4 205 aa9.03□□□□□ -0.96
C9orf3-214ENST00000473778 OR5B12Q96R08 314 aa9.03□□□□□ -0.96
C9orf3-214ENST00000473778 GGTLC1Q9BX51 225 aa9.03□□□□□ -0.96
C9orf3-214ENST00000473778 GAL3ST2Q9H3Q3 398 aa9.03□□□□□ -0.96
C9orf3-214ENST00000473778 LPAR2Q9HBW0 351 aa9.03□□□□□ -0.96
C9orf3-214ENST00000473778 ZNF71Q9NQZ8 489 aaPredicted RBP9.03□□□□□ -0.96
C9orf3-214ENST00000473778 RP1L1Q8IWN7 2480 aaPredicted RBP9.03□□□□□ -0.96
C9orf3-214ENST00000473778 AQP7O14520 342 aa9.02□□□□□ -0.96
C9orf3-214ENST00000473778 HPRT1P00492 218 aa9.02□□□□□ -0.96
C9orf3-214ENST00000473778 ADH4P08319 380 aa9.02□□□□□ -0.96
C9orf3-214ENST00000473778 IL3RAP26951 378 aa9.02□□□□□ -0.96
C9orf3-214ENST00000473778 PDLIM4P50479 330 aa9.02□□□□□ -0.96
C9orf3-214ENST00000473778 RBX1P62877 108 aa9.02□□□□□ -0.96
C9orf3-214ENST00000473778 ACOT6Q3I5F7 207 aaPredicted RBP9.02□□□□□ -0.96
C9orf3-214ENST00000473778 FAM78BQ5VT40 261 aa9.02□□□□□ -0.96
C9orf3-214ENST00000473778 OR2T10Q8NGZ9 312 aa9.02□□□□□ -0.96
C9orf3-214ENST00000473778 ANAPC16Q96DE5 110 aa9.02□□□□□ -0.96
C9orf3-214ENST00000473778 SDSLQ96GA7 329 aa9.02□□□□□ -0.96
C9orf3-214ENST00000473778 C17orf112F2Z3M2 114 aa9.02□□□□□ -0.97
C9orf3-214ENST00000473778 SIAH2O43255 324 aa9.02□□□□□ -0.97
C9orf3-214ENST00000473778 VENTXO95231 258 aa9.02□□□□□ -0.97
C9orf3-214ENST00000473778 CGAP01215 116 aa9.02□□□□□ -0.97
C9orf3-214ENST00000473778 TYMSP04818 313 aa9.02□□□□□ -0.97
C9orf3-214ENST00000473778 GCH1P30793 250 aa9.02□□□□□ -0.97
C9orf3-214ENST00000473778 C1orf194Q5T5A4 169 aa9.02□□□□□ -0.97
C9orf3-214ENST00000473778 ETFRF1Q6IPR1 90 aa9.02□□□□□ -0.97
C9orf3-214ENST00000473778 ZNF705AQ6ZN79 300 aaPredicted RBP9.02□□□□□ -0.97
C9orf3-214ENST00000473778 TMEM144Q7Z5S9 345 aa9.02□□□□□ -0.97
C9orf3-214ENST00000473778 C1orf162Q8NEQ5 155 aaPredicted RBP9.02□□□□□ -0.97
C9orf3-214ENST00000473778 SSMEM1Q8WWF3 244 aa9.02□□□□□ -0.97
C9orf3-214ENST00000473778 DDB2Q92466 427 aa9.02□□□□□ -0.97
C9orf3-214ENST00000473778 RAB1CQ92928 201 aa9.02□□□□□ -0.97
C9orf3-214ENST00000473778 SEPSECSQ9HD40 501 aaKnown RBP9.02□□□□□ -0.97
C9orf3-214ENST00000473778 PLSCR4Q9NRQ2 329 aa9.02□□□□□ -0.97
C9orf3-214ENST00000473778 TMEM140Q9NV12 185 aa9.02□□□□□ -0.97
C9orf3-214ENST00000473778 SCO2A0A1W2PP80 73 aa9.01□□□□□ -0.97
C9orf3-214ENST00000473778 ITGB1BP1O14713 200 aa9.01□□□□□ -0.97
C9orf3-214ENST00000473778 TMPRSS2O15393 492 aa9.01□□□□□ -0.97
C9orf3-214ENST00000473778 RPL15P61313 204 aaKnown RBP9.01□□□□□ -0.97
C9orf3-214ENST00000473778 SPATA31B1PQ5VZV4 182 aa9.01□□□□□ -0.97
C9orf3-214ENST00000473778 TCF23Q7RTU1 214 aa9.01□□□□□ -0.97
C9orf3-214ENST00000473778 RPRMLQ8N4K4 120 aa9.01□□□□□ -0.97
C9orf3-214ENST00000473778 OR2V2Q96R30 315 aa9.01□□□□□ -0.97
C9orf3-214ENST00000473778 PXMP4Q9Y6I8 212 aa9.01□□□□□ -0.97
C9orf3-214ENST00000473778 AKAP13Q12802 2813 aa9.01□□□□□ -0.97
C9orf3-214ENST00000473778 OTOGLQ3ZCN5 2332 aa9.01□□□□□ -0.97
C9orf3-214ENST00000473778 KIR2DL5BA0A0G2JN68 375 aa9.01□□□□□ -0.97
C9orf3-214ENST00000473778 KIR2DL5BA0A0G2JPC4 375 aa9.01□□□□□ -0.97
C9orf3-214ENST00000473778 PRR33A8MZF0 331 aa9.01□□□□□ -0.97
C9orf3-214ENST00000473778 NUPR1O60356 82 aa9.01□□□□□ -0.97
C9orf3-214ENST00000473778 YPEL1O60688 119 aa9.01□□□□□ -0.97
C9orf3-214ENST00000473778 HNF1AP20823 631 aa9.01□□□□□ -0.97
C9orf3-214ENST00000473778 C17orf58Q2M2W7 97 aa9.01□□□□□ -0.97
C9orf3-214ENST00000473778 CR1LQ2VPA4 569 aa9.01□□□□□ -0.97
C9orf3-214ENST00000473778 KIR2DL5AQ8N109 375 aa9.01□□□□□ -0.97
C9orf3-214ENST00000473778 OR4A16Q8NH70 328 aa9.01□□□□□ -0.97
C9orf3-214ENST00000473778 YPEL2Q96QA6 119 aa9.01□□□□□ -0.97
C9orf3-214ENST00000473778 HEYLQ9NQ87 328 aaPredicted RBP9.01□□□□□ -0.97
C9orf3-214ENST00000473778 JPT1Q9UK76 154 aa9.01□□□□□ -0.97
C9orf3-214ENST00000473778 LSM4Q9Y4Z0 139 aaKnown RBP9.01□□□□□ -0.97
C9orf3-214ENST00000473778 YTHDF2Q9Y5A9 579 aaKnown RBP9.01□□□□□ -0.97
C9orf3-214ENST00000473778 SLC25A15Q9Y619 301 aa9.01□□□□□ -0.97
C9orf3-214ENST00000473778 AHRRA9YTQ3 701 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 F2RL2O00254 374 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 FOXH1O75593 365 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 STAG3L2P0CL84 134 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 STAG3L3P0CL85 134 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 CGB3P0DN86 165 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 CGB7P0DN87 165 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 BRS3P32247 399 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 OPRK1P41145 380 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 TMPRSS3P57727 454 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 TMEM249Q2WGJ8 235 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 PDLIM3Q53GG5 364 aaPredicted RBP9□□□□□ -0.97
C9orf3-214ENST00000473778 CT45A1Q5HYN5 189 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 MOGAT3Q86VF5 341 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 MRPL41Q8IXM3 137 aaKnown RBP9□□□□□ -0.97
C9orf3-214ENST00000473778 CT45A3Q8NHU0 189 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 TMEM18Q96B42 140 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 FAM122AQ96E09 287 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 LOXL4Q96JB6 756 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 TCF19Q9Y242 345 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 SAA2-SAA4A0A096LPE2 208 aa9□□□□□ -0.97
C9orf3-214ENST00000473778 A0A1W2PPV4 95 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms