RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 TRAV3A0A0B4J244 114 aa10.88□□□□□ -0.67
TOP3B-215ENST00000470338 WI2-2373I1.2A0A1W2PRP0 233 aa10.88□□□□□ -0.67
TOP3B-215ENST00000470338 CGB1A6NKQ9 187 aa10.88□□□□□ -0.67
TOP3B-215ENST00000470338 NPIPB5A8MRT5 1133 aa10.88□□□□□ -0.67
TOP3B-215ENST00000470338 CTDSPLO15194 276 aa10.88□□□□□ -0.67
TOP3B-215ENST00000470338 CRYGCP07315 174 aa10.88□□□□□ -0.67
TOP3B-215ENST00000470338 S100GP29377 79 aa10.88□□□□□ -0.67
TOP3B-215ENST00000470338 INSL3P51460 131 aa10.88□□□□□ -0.67
TOP3B-215ENST00000470338 TAS2R19P59542 299 aa10.88□□□□□ -0.67
TOP3B-215ENST00000470338 KLK9Q2XQG4 91 aa10.88□□□□□ -0.67
TOP3B-215ENST00000470338 PHLDA2Q53GA4 152 aa10.88□□□□□ -0.67
TOP3B-215ENST00000470338 DMBX1Q8NFW5 382 aa10.88□□□□□ -0.67
TOP3B-215ENST00000470338 FYTTD1Q96QD9 318 aaKnown RBP10.88□□□□□ -0.67
TOP3B-215ENST00000470338 AKIP1Q9NQ31 210 aa10.88□□□□□ -0.67
TOP3B-215ENST00000470338 TMEM140Q9NV12 185 aa10.88□□□□□ -0.67
TOP3B-215ENST00000470338 KLK9Q9UKQ9 250 aa10.88□□□□□ -0.67
TOP3B-215ENST00000470338 ZNF257Q9Y2Q1 563 aa10.88□□□□□ -0.67
TOP3B-215ENST00000470338 FAM223BA6NKX1 122 aa10.87□□□□□ -0.67
TOP3B-215ENST00000470338 MARCH11A6NNE9 402 aa10.87□□□□□ -0.67
TOP3B-215ENST00000470338 PRH1P02810 166 aa10.87□□□□□ -0.67
TOP3B-215ENST00000470338 MYOD1P15172 320 aa10.87□□□□□ -0.67
TOP3B-215ENST00000470338 OR2B8PP59922 312 aa10.87□□□□□ -0.67
TOP3B-215ENST00000470338 RHOGP84095 191 aa10.87□□□□□ -0.67
TOP3B-215ENST00000470338 DEFA5Q01523 94 aa10.87□□□□□ -0.67
TOP3B-215ENST00000470338 ACSM6Q6P461 480 aa10.87□□□□□ -0.67
TOP3B-215ENST00000470338 TBC1D26Q86UD7 250 aa10.87□□□□□ -0.67
TOP3B-215ENST00000470338 FAM223AQ8IWN6 122 aa10.87□□□□□ -0.67
TOP3B-215ENST00000470338 NECAP1Q8NC96 275 aa10.87□□□□□ -0.67
TOP3B-215ENST00000470338 OR4D10Q8NGI6 311 aa10.87□□□□□ -0.67
TOP3B-215ENST00000470338 SMIM4Q8WVI0 70 aa10.87□□□□□ -0.67
TOP3B-215ENST00000470338 ZNF486Q96H40 463 aaPredicted RBP10.87□□□□□ -0.67
TOP3B-215ENST00000470338 SOSTQ9BQB4 213 aa10.87□□□□□ -0.67
TOP3B-215ENST00000470338 C6orf62Q9GZU0 229 aaPredicted RBP10.87□□□□□ -0.67
TOP3B-215ENST00000470338 PEF1Q9UBV8 284 aaKnown RBP10.87□□□□□ -0.67
TOP3B-215ENST00000470338 ANKRD34BA5PLL1 514 aa10.86□□□□□ -0.67
TOP3B-215ENST00000470338 RAB3DO95716 219 aa10.86□□□□□ -0.67
TOP3B-215ENST00000470338 KRASP01116 189 aa10.86□□□□□ -0.67
TOP3B-215ENST00000470338 AREGP15514 252 aa10.86□□□□□ -0.67
TOP3B-215ENST00000470338 RPA2P15927 270 aa10.86□□□□□ -0.67
TOP3B-215ENST00000470338 CTRB1P17538 263 aa10.86□□□□□ -0.67
TOP3B-215ENST00000470338 ZP3P21754 424 aa10.86□□□□□ -0.67
TOP3B-215ENST00000470338 PTBP1P26599 531 aaKnown RBP eCLIP10.86□□□□□ -0.67
TOP3B-215ENST00000470338 PSMB6P28072 239 aa10.86□□□□□ -0.67
TOP3B-215ENST00000470338 TNFSF8P32971 234 aa10.86□□□□□ -0.67
TOP3B-215ENST00000470338 ERVK-16P61578 105 aa10.86□□□□□ -0.67
TOP3B-215ENST00000470338 RND3P61587 244 aa10.86□□□□□ -0.67
TOP3B-215ENST00000470338 ATP5G2Q06055 141 aa10.86□□□□□ -0.67
TOP3B-215ENST00000470338 IL18Q14116 193 aa10.86□□□□□ -0.67
TOP3B-215ENST00000470338 CTRB2Q6GPI1 263 aa10.86□□□□□ -0.67
TOP3B-215ENST00000470338 STEAP1BQ6NZ63 245 aa10.86□□□□□ -0.67
TOP3B-215ENST00000470338 ZNF429Q86V71 674 aa10.86□□□□□ -0.67
TOP3B-215ENST00000470338 TERB2Q8NHR7 220 aa10.86□□□□□ -0.67
TOP3B-215ENST00000470338 MCFD2Q8NI22 146 aa10.86□□□□□ -0.67
TOP3B-215ENST00000470338 FANCD2OSQ96PS1 177 aa10.86□□□□□ -0.67
TOP3B-215ENST00000470338 COMMD5Q9GZQ3 224 aa10.86□□□□□ -0.67
TOP3B-215ENST00000470338 RBM38Q9H0Z9 239 aaKnown RBP10.86□□□□□ -0.67
TOP3B-215ENST00000470338 DPPA5A6NC42 116 aa10.85□□□□□ -0.67
TOP3B-215ENST00000470338 GSTZ1O43708 216 aaPredicted RBP10.85□□□□□ -0.67
TOP3B-215ENST00000470338 TRBV12-3P01733 135 aa10.85□□□□□ -0.67
TOP3B-215ENST00000470338 G6PCP35575 357 aa10.85□□□□□ -0.67
TOP3B-215ENST00000470338 KLF5Q13887 457 aaPredicted RBP10.85□□□□□ -0.67
TOP3B-215ENST00000470338 SRSF8Q9BRL6 282 aaKnown RBP10.85□□□□□ -0.67
TOP3B-215ENST00000470338 RSL24D1Q9UHA3 163 aaKnown RBP10.85□□□□□ -0.67
TOP3B-215ENST00000470338 COL7A1Q02388 2944 aa10.84□□□□□ -0.67
TOP3B-215ENST00000470338 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.84□□□□□ -0.67
TOP3B-215ENST00000470338 TEX50A0A1B0GTY4 177 aa10.84□□□□□ -0.67
TOP3B-215ENST00000470338 IGLC7A0M8Q6 106 aa10.84□□□□□ -0.67
TOP3B-215ENST00000470338 ZNF701M0R085 212 aaPredicted RBP10.84□□□□□ -0.67
TOP3B-215ENST00000470338 OR2J3O76001 311 aa10.84□□□□□ -0.67
TOP3B-215ENST00000470338 DHFRP00374 187 aa10.84□□□□□ -0.67
TOP3B-215ENST00000470338 IGKV1-39P01597 117 aa10.84□□□□□ -0.67
TOP3B-215ENST00000470338 IGKV1D-39P04432 117 aa10.84□□□□□ -0.67
TOP3B-215ENST00000470338 PGAM2P15259 253 aa10.84□□□□□ -0.67
TOP3B-215ENST00000470338 MEF2DQ14814 521 aa10.84□□□□□ -0.67
TOP3B-215ENST00000470338 C15orf32Q32M92 178 aa10.84□□□□□ -0.67
TOP3B-215ENST00000470338 THOC7Q6I9Y2 204 aaKnown RBP10.84□□□□□ -0.67
TOP3B-215ENST00000470338 C19orf35Q6ZS72 473 aa10.84□□□□□ -0.67
TOP3B-215ENST00000470338 MRGPRFQ96AM1 343 aa10.84□□□□□ -0.67
TOP3B-215ENST00000470338 SEC22AQ96IW7 307 aa10.84□□□□□ -0.67
TOP3B-215ENST00000470338 QTRT1Q9BXR0 403 aaKnown RBP10.84□□□□□ -0.67
TOP3B-215ENST00000470338 FABP12A6NFH5 140 aa10.83□□□□□ -0.68
TOP3B-215ENST00000470338 CCDC160A6NGH7 325 aa10.83□□□□□ -0.68
TOP3B-215ENST00000470338 SAP30O75446 220 aa10.83□□□□□ -0.68
TOP3B-215ENST00000470338 TRAPPC2P0DI81 140 aa10.83□□□□□ -0.68
TOP3B-215ENST00000470338 TRAPPC2BP0DI82 140 aa10.83□□□□□ -0.68
TOP3B-215ENST00000470338 HIST1H1BP16401 226 aaKnown RBP10.83□□□□□ -0.68
TOP3B-215ENST00000470338 PI3P19957 117 aa10.83□□□□□ -0.68
TOP3B-215ENST00000470338 ECI1P42126 302 aa10.83□□□□□ -0.68
TOP3B-215ENST00000470338 PIGPP57054 158 aa10.83□□□□□ -0.68
TOP3B-215ENST00000470338 EXOSC2Q13868 293 aaKnown RBP10.83□□□□□ -0.68
TOP3B-215ENST00000470338 DEFB121Q5J5C9 76 aa10.83□□□□□ -0.68
TOP3B-215ENST00000470338 FAM209BQ5JX69 171 aa10.83□□□□□ -0.68
TOP3B-215ENST00000470338 OR1L8Q8NGR8 309 aa10.83□□□□□ -0.68
TOP3B-215ENST00000470338 ZFAND1Q8TCF1 268 aa10.83□□□□□ -0.68
TOP3B-215ENST00000470338 NDUFA4L2Q9NRX3 87 aa10.83□□□□□ -0.68
TOP3B-215ENST00000470338 FBXL7Q9UJT9 491 aa10.83□□□□□ -0.68
TOP3B-215ENST00000470338 DMRT1Q9Y5R6 373 aa10.83□□□□□ -0.68
TOP3B-215ENST00000470338 IGLV11-55A0A075B6I3 123 aa10.82□□□□□ -0.68
TOP3B-215ENST00000470338 ANKRD20A5PA0PJZ0 165 aa10.82□□□□□ -0.68
TOP3B-215ENST00000470338 H0Y980 276 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms