RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 KBTBD11-OT1A0A1B0GTJ5 212 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 A0A1B0GX30 115 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 CEACAM4O75871 244 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 GCHFRP30047 84 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 CCKARP32238 428 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 YPEL3P61236 119 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-209ENST00000470026 PRR20EP86478 221 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 PRR20CP86479 221 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 PRR20DP86480 221 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 PRR20BP86481 221 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 PRR20AP86496 221 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 EFNB3Q15768 340 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 TIMM23BQ5SRD1 257 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 MOGAT3Q86VF5 341 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 GBGT1Q8N5D6 347 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 TMEM18Q96B42 140 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 SDSLQ96GA7 329 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 ADTRPQ96IZ2 230 aa11.23□□□□□ -0.61
BRCA1-209ENST00000470026 NOL4LQ96MY1 436 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-209ENST00000470026 YTHDF2Q9Y5A9 579 aaKnown RBP11.23□□□□□ -0.61
BRCA1-209ENST00000470026 FRYQ5TBA9 3013 aa11.22□□□□□ -0.61
BRCA1-209ENST00000470026 HEATR1Q9H583 2144 aaKnown RBP11.22□□□□□ -0.61
BRCA1-209ENST00000470026 TRAV9-1A0A075B6T8 112 aa11.22□□□□□ -0.61
BRCA1-209ENST00000470026 SAA2-SAA4A0A096LPE2 208 aa11.22□□□□□ -0.61
BRCA1-209ENST00000470026 SCO2A0A1W2PP80 73 aa11.22□□□□□ -0.61
BRCA1-209ENST00000470026 SAA2P0DJI9 122 aaPredicted RBP11.22□□□□□ -0.61
BRCA1-209ENST00000470026 BMP5P22003 454 aa11.22□□□□□ -0.61
BRCA1-209ENST00000470026 NPY1RP25929 384 aa11.22□□□□□ -0.61
BRCA1-209ENST00000470026 OR4A47Q6IF82 309 aa11.22□□□□□ -0.61
BRCA1-209ENST00000470026 TEX38Q6PEX7 206 aa11.22□□□□□ -0.61
BRCA1-209ENST00000470026 TEPPQ6URK8 271 aa11.22□□□□□ -0.61
BRCA1-209ENST00000470026 UNQ6494/PRO21346Q6UXR6 183 aa11.22□□□□□ -0.61
BRCA1-209ENST00000470026 TCF23Q7RTU1 214 aa11.22□□□□□ -0.61
BRCA1-209ENST00000470026 ZNF664Q8N3J9 261 aa11.22□□□□□ -0.61
BRCA1-209ENST00000470026 SLC24A4Q8NFF2 622 aa11.22□□□□□ -0.61
BRCA1-209ENST00000470026 OR5T1Q8NG75 326 aa11.22□□□□□ -0.61
BRCA1-209ENST00000470026 NEUROG1Q92886 237 aa11.22□□□□□ -0.61
BRCA1-209ENST00000470026 SFXN3Q9BWM7 321 aa11.22□□□□□ -0.61
BRCA1-209ENST00000470026 PRO1933Q9H354 126 aa11.22□□□□□ -0.61
BRCA1-209ENST00000470026 LY96Q9Y6Y9 160 aa11.22□□□□□ -0.61
BRCA1-209ENST00000470026 A0A0U1RQK1 487 aa11.21□□□□□ -0.61
BRCA1-209ENST00000470026 ZNF320A2RRD8 509 aa11.21□□□□□ -0.61
BRCA1-209ENST00000470026 PGPEP1LA6NFU8 196 aa11.21□□□□□ -0.61
BRCA1-209ENST00000470026 A8MWP6 167 aa11.21□□□□□ -0.61
BRCA1-209ENST00000470026 AREGP15514 252 aa11.21□□□□□ -0.61
BRCA1-209ENST00000470026 TIMP3P35625 211 aa11.21□□□□□ -0.61
BRCA1-209ENST00000470026 KLF3P57682 345 aaPredicted RBP11.21□□□□□ -0.61
BRCA1-209ENST00000470026 RHOBP62745 196 aa11.21□□□□□ -0.61
BRCA1-209ENST00000470026 ZNF600Q6ZNG1 722 aa11.21□□□□□ -0.61
BRCA1-209ENST00000470026 STPG3Q8N7X2 389 aa11.21□□□□□ -0.61
BRCA1-209ENST00000470026 SGMS2Q8NHU3 365 aa11.21□□□□□ -0.61
BRCA1-209ENST00000470026 AURKAIP1Q9NWT8 199 aaPredicted RBP11.21□□□□□ -0.61
BRCA1-209ENST00000470026 IDI2-AS1Q9NZ38 188 aa11.21□□□□□ -0.61
BRCA1-209ENST00000470026 TRAPPC1Q9Y5R8 145 aa11.21□□□□□ -0.61
BRCA1-209ENST00000470026 ARL2-SNX15V9GYD0 113 aa11.21□□□□□ -0.61
BRCA1-209ENST00000470026 DSCAMO60469 2012 aa11.21□□□□□ -0.62
BRCA1-209ENST00000470026 MDFIC2A0A1B0GVS7 189 aa11.21□□□□□ -0.62
BRCA1-209ENST00000470026 C9JCJ5 164 aa11.21□□□□□ -0.62
BRCA1-209ENST00000470026 IGHV3-7P01780 117 aa11.21□□□□□ -0.62
BRCA1-209ENST00000470026 ZNF83P51522 516 aa11.21□□□□□ -0.62
BRCA1-209ENST00000470026 STUMQ69YW2 141 aa11.21□□□□□ -0.62
BRCA1-209ENST00000470026 ZNF474Q6S9Z5 364 aaPredicted RBP11.21□□□□□ -0.62
BRCA1-209ENST00000470026 OCC1Q8TAD7 63 aa11.21□□□□□ -0.62
BRCA1-209ENST00000470026 ITLN1Q8WWA0 313 aa11.21□□□□□ -0.62
BRCA1-209ENST00000470026 SEPSECSQ9HD40 501 aaKnown RBP11.21□□□□□ -0.62
BRCA1-209ENST00000470026 URB1O60287 2271 aaKnown RBP11.2□□□□□ -0.62
BRCA1-209ENST00000470026 CA2P00918 260 aa11.2□□□□□ -0.62
BRCA1-209ENST00000470026 LINC00869P0C866 280 aa11.2□□□□□ -0.62
BRCA1-209ENST00000470026 SELLP14151 372 aa11.2□□□□□ -0.62
BRCA1-209ENST00000470026 TMEM30BQ3MIR4 351 aa11.2□□□□□ -0.62
BRCA1-209ENST00000470026 SSMEM1Q8WWF3 244 aa11.2□□□□□ -0.62
BRCA1-209ENST00000470026 SLC25A10Q9UBX3 287 aaPredicted RBP11.2□□□□□ -0.62
BRCA1-209ENST00000470026 ZNF257Q9Y2Q1 563 aa11.2□□□□□ -0.62
BRCA1-209ENST00000470026 TANC2Q9HCD6 1990 aa11.2□□□□□ -0.62
BRCA1-209ENST00000470026 TRGV10A0A0A0MS01 117 aa11.2□□□□□ -0.62
BRCA1-209ENST00000470026 MRPS11P82912 194 aaKnown RBP11.2□□□□□ -0.62
BRCA1-209ENST00000470026 SPATA31B1PQ5VZV4 182 aa11.2□□□□□ -0.62
BRCA1-209ENST00000470026 IGF2-ASQ6U949 168 aa11.2□□□□□ -0.62
BRCA1-209ENST00000470026 OR10G8Q8NGN5 311 aa11.2□□□□□ -0.62
BRCA1-209ENST00000470026 ZCCHC14Q8WYQ9 949 aaKnown RBP11.2□□□□□ -0.62
BRCA1-209ENST00000470026 CORO2AQ92828 525 aa11.2□□□□□ -0.62
BRCA1-209ENST00000470026 LEAP2Q969E1 77 aa11.2□□□□□ -0.62
BRCA1-209ENST00000470026 M0R1B8 84 aa11.19□□□□□ -0.62
BRCA1-209ENST00000470026 SELENOTP62341 195 aa11.19□□□□□ -0.62
BRCA1-209ENST00000470026 RAB31Q13636 194 aa11.19□□□□□ -0.62
BRCA1-209ENST00000470026 LBHQ53QV2 105 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-209ENST00000470026 BEND2Q8NDZ0 799 aa11.19□□□□□ -0.62
BRCA1-209ENST00000470026 PRNDQ9UKY0 176 aa11.19□□□□□ -0.62
BRCA1-209ENST00000470026 K7EN84 100 aa11.18□□□□□ -0.62
BRCA1-209ENST00000470026 SPRY3O43610 288 aa11.18□□□□□ -0.62
BRCA1-209ENST00000470026 MT-CO2P00403 227 aa11.18□□□□□ -0.62
BRCA1-209ENST00000470026 FTH1P19P0C7X4 201 aa11.18□□□□□ -0.62
BRCA1-209ENST00000470026 ATP5IP56385 69 aaPredicted RBP11.18□□□□□ -0.62
BRCA1-209ENST00000470026 RPL31P62899 125 aaKnown RBP11.18□□□□□ -0.62
BRCA1-209ENST00000470026 FAM201AQ5SY85 155 aa11.18□□□□□ -0.62
BRCA1-209ENST00000470026 GAFA1Q96PS6 74 aa11.18□□□□□ -0.62
BRCA1-209ENST00000470026 IL36BQ9NZH7 164 aa11.18□□□□□ -0.62
BRCA1-209ENST00000470026 RNF7Q9UBF6 113 aa11.18□□□□□ -0.62
BRCA1-209ENST00000470026 SLC45A2Q9UMX9 530 aa11.18□□□□□ -0.62
BRCA1-209ENST00000470026 TM4SF5O14894 197 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms