RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 AMY1AP04745 511 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 CNTFRP26992 372 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 PSMB6P28072 239 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 IER3P46695 156 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 F2RL1P55085 397 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 HSPE1P61604 102 aaKnown RBP6.49□□□□□ -1.37
NPHP3-204ENST00000469232 CD83Q01151 205 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 TNFRSF9Q07011 255 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 IZUMO4Q1ZYL8 232 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 C5orf64Q2M2E5 130 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 KLK9Q2XQG4 91 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 Q5BKY6 102 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 CXorf66Q5JRM2 361 aaPredicted RBP6.49□□□□□ -1.37
NPHP3-204ENST00000469232 PVRIGQ6DKI7 326 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 MMD2Q8IY49 270 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 Q8N9W7 124 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 DMBX1Q8NFW5 382 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 OR5B3Q8NH48 314 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 OR5R1Q8NH85 324 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 RBMXL1Q96E39 390 aaKnown RBP6.49□□□□□ -1.37
NPHP3-204ENST00000469232 ZNF430Q9H8G1 570 aaPredicted RBP6.49□□□□□ -1.37
NPHP3-204ENST00000469232 FKBP11Q9NYL4 201 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 KLK9Q9UKQ9 250 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 RCL1Q9Y2P8 373 aaKnown RBP6.49□□□□□ -1.37
NPHP3-204ENST00000469232 FAM96BQ9Y3D0 163 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 POMT1Q9Y6A1 747 aa6.49□□□□□ -1.37
NPHP3-204ENST00000469232 C13orf42A0A1B0GVH6 325 aa6.48□□□□□ -1.37
NPHP3-204ENST00000469232 A0A1B0GW64 132 aa6.48□□□□□ -1.37
NPHP3-204ENST00000469232 CGB1A6NKQ9 187 aa6.48□□□□□ -1.37
NPHP3-204ENST00000469232 HMSDA8MTL9 139 aa6.48□□□□□ -1.37
NPHP3-204ENST00000469232 K7EPK0 472 aa6.48□□□□□ -1.37
NPHP3-204ENST00000469232 EREGO14944 169 aa6.48□□□□□ -1.37
NPHP3-204ENST00000469232 ST8SIA3O43173 380 aa6.48□□□□□ -1.37
NPHP3-204ENST00000469232 SLC25A17O43808 307 aa6.48□□□□□ -1.37
NPHP3-204ENST00000469232 NKX2-1P43699 371 aaPredicted RBP6.48□□□□□ -1.37
NPHP3-204ENST00000469232 VDAC2P45880 294 aaPredicted RBP6.48□□□□□ -1.37
NPHP3-204ENST00000469232 CRIP2P52943 208 aaPredicted RBP6.48□□□□□ -1.37
NPHP3-204ENST00000469232 PAX9P55771 341 aa6.48□□□□□ -1.37
NPHP3-204ENST00000469232 TAS2R30P59541 319 aa6.48□□□□□ -1.37
NPHP3-204ENST00000469232 SPCS3P61009 180 aa6.48□□□□□ -1.37
NPHP3-204ENST00000469232 RPL8P62917 257 aaKnown RBP6.48□□□□□ -1.37
NPHP3-204ENST00000469232 FGL1Q08830 312 aa6.48□□□□□ -1.37
NPHP3-204ENST00000469232 RAB32Q13637 225 aa6.48□□□□□ -1.37
NPHP3-204ENST00000469232 BSXQ3C1V8 233 aa6.48□□□□□ -1.37
NPHP3-204ENST00000469232 THOC7Q6I9Y2 204 aaKnown RBP6.48□□□□□ -1.37
NPHP3-204ENST00000469232 PRSS54Q6PEW0 395 aa6.48□□□□□ -1.37
NPHP3-204ENST00000469232 PPP1R27Q86WC6 154 aa6.48□□□□□ -1.37
NPHP3-204ENST00000469232 OR2T35Q8NGX2 323 aa6.48□□□□□ -1.37
NPHP3-204ENST00000469232 SSX3Q99909 188 aa6.48□□□□□ -1.37
NPHP3-204ENST00000469232 SRSF8Q9BRL6 282 aaKnown RBP6.48□□□□□ -1.37
NPHP3-204ENST00000469232 YAE1D1Q9NRH1 226 aa6.48□□□□□ -1.37
NPHP3-204ENST00000469232 NDUFA4L2Q9NRX3 87 aa6.48□□□□□ -1.37
NPHP3-204ENST00000469232 C1RLQ9NZP8 487 aa6.48□□□□□ -1.37
NPHP3-204ENST00000469232 ZNF580Q9UK33 172 aa6.48□□□□□ -1.37
NPHP3-204ENST00000469232 SONP18583 2426 aaKnown RBP6.48□□□□□ -1.37
NPHP3-204ENST00000469232 TEX50A0A1B0GTY4 177 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 SCO2A0A1W2PP80 73 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 CLDN34H7C241 214 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 M0QZK8 103 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 DEDDO75618 318 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 SNAPC5O75971 98 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 TMEM50AO95807 157 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 TMEM11P17152 192 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 HNF1AP20823 631 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 CD24P25063 80 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 COMPP49747 757 aaPredicted RBP6.47□□□□□ -1.37
NPHP3-204ENST00000469232 OR2B8PP59922 312 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 MMDQ15546 238 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 ZNF562Q6V9R5 426 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 SSX9Q7RTT3 188 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 C5orf56Q8N8D9 126 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 OR11H4Q8NGC9 324 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 SSMEM1Q8WWF3 244 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 SMIM8Q96KF7 97 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 RAB40CQ96S21 281 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 SMR3AQ99954 134 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 PDCD10Q9BUL8 212 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 METTL1Q9UBP6 276 aaKnown RBP6.47□□□□□ -1.37
NPHP3-204ENST00000469232 PITPNC1Q9UKF7 332 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 CDC42EP3Q9UKI2 254 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 MOB4Q9Y3A3 225 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 HIVEP2P31629 2446 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 TET2Q6N021 2002 aaPredicted RBP6.47□□□□□ -1.37
NPHP3-204ENST00000469232 MDFIC2A0A1B0GVS7 189 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 FAM25EA8MYX2 175 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 FCN1O00602 326 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 SYNGR2O43760 224 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 PFDN1O60925 122 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 MED6O75586 246 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 IGHV4-59P01825 116 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 ATP5IP56385 69 aaPredicted RBP6.47□□□□□ -1.37
NPHP3-204ENST00000469232 PRCDQ00LT1 54 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 PJVKQ0ZLH3 352 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 SCGB2A2Q13296 93 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 C11orf87Q6NUJ2 197 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 OR1L8Q8NGR8 309 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 OR4A16Q8NH70 328 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 OR1S1Q8NH92 325 aa6.47□□□□□ -1.37
NPHP3-204ENST00000469232 QTRT1Q9BXR0 403 aaKnown RBP6.47□□□□□ -1.37
NPHP3-204ENST00000469232 CHIAQ9BZP6 476 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms