RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 IL6RP08887 468 aaPredicted RBP9.36□□□□□ -0.91
SHROOM3-202ENST00000466541 PTBP1P26599 531 aaKnown RBP eCLIP9.36□□□□□ -0.91
SHROOM3-202ENST00000466541 FAUP35544 74 aaKnown RBP9.36□□□□□ -0.91
SHROOM3-202ENST00000466541 ETV6P41212 452 aa9.36□□□□□ -0.91
SHROOM3-202ENST00000466541 OR2B8PP59922 312 aa9.36□□□□□ -0.91
SHROOM3-202ENST00000466541 RND3P61587 244 aa9.36□□□□□ -0.91
SHROOM3-202ENST00000466541 KLF9Q13886 244 aaPredicted RBP9.36□□□□□ -0.91
SHROOM3-202ENST00000466541 KIAA0141Q14154 515 aaPredicted RBP9.36□□□□□ -0.91
SHROOM3-202ENST00000466541 TRIM16LQ309B1 348 aa9.36□□□□□ -0.91
SHROOM3-202ENST00000466541 CNPY1Q3B7I2 92 aa9.36□□□□□ -0.91
SHROOM3-202ENST00000466541 TRIQKQ629K1 86 aa9.36□□□□□ -0.91
SHROOM3-202ENST00000466541 C19orf35Q6ZS72 473 aa9.36□□□□□ -0.91
SHROOM3-202ENST00000466541 OR11H1Q8NG94 326 aa9.36□□□□□ -0.91
SHROOM3-202ENST00000466541 OR4A5Q8NH83 315 aa9.36□□□□□ -0.91
SHROOM3-202ENST00000466541 C4orf3Q8WVX3 66 aa9.36□□□□□ -0.91
SHROOM3-202ENST00000466541 TRIM63Q969Q1 353 aa9.36□□□□□ -0.91
SHROOM3-202ENST00000466541 UBE2E2Q96LR5 201 aa9.36□□□□□ -0.91
SHROOM3-202ENST00000466541 TP53RKQ96S44 253 aa9.36□□□□□ -0.91
SHROOM3-202ENST00000466541 RTBDNQ9BSG5 229 aaPredicted RBP9.36□□□□□ -0.91
SHROOM3-202ENST00000466541 COMMD5Q9GZQ3 224 aa9.36□□□□□ -0.91
SHROOM3-202ENST00000466541 SRRQ9GZT4 340 aa9.36□□□□□ -0.91
SHROOM3-202ENST00000466541 BET1LQ9NYM9 111 aa9.36□□□□□ -0.91
SHROOM3-202ENST00000466541 ANKRD34BA5PLL1 514 aa9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 G3V4G9 280 aa9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 RBMXL2O75526 392 aaKnown RBP9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 IGKV1-39P01597 117 aa9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 IGKV1D-39P04432 117 aa9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 OR9G9P0C7N8 305 aa9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 AREGP15514 252 aa9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 IGLL1P15814 213 aa9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 AKR1C4P17516 323 aa9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 MAS1LP35410 378 aa9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 ECI1P42126 302 aa9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 BAK1Q16611 211 aa9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 OXLD1Q5BKU9 147 aa9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 ETV3LQ6ZN32 361 aa9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 H2BFWTQ7Z2G1 175 aa9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 MRPL41Q8IXM3 137 aaKnown RBP9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 ADAD2Q8NCV1 583 aaKnown RBP9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 OR1N2Q8NGR9 330 aa9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 OR4A16Q8NH70 328 aa9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 RNASE11Q8TAA1 199 aaKnown RBP9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 DPF1Q92782 380 aa9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 C5orf66Q9H5L9 145 aa9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 OR51B2Q9Y5P1 312 aa9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 MEGF8Q7Z7M0 2845 aa9.35□□□□□ -0.91
SHROOM3-202ENST00000466541 A0A1B0GW64 132 aa9.34□□□□□ -0.91
SHROOM3-202ENST00000466541 TEX22C9J3V5 150 aa9.34□□□□□ -0.91
SHROOM3-202ENST00000466541 H0Y980 276 aa9.34□□□□□ -0.91
SHROOM3-202ENST00000466541 OR5AC1P0C628 307 aa9.34□□□□□ -0.91
SHROOM3-202ENST00000466541 MYCNOSP40205 109 aa9.34□□□□□ -0.91
SHROOM3-202ENST00000466541 MECP2P51608 486 aaKnown RBP9.34□□□□□ -0.91
SHROOM3-202ENST00000466541 AKR1C2P52895 323 aa9.34□□□□□ -0.91
SHROOM3-202ENST00000466541 POU2AF1Q16633 256 aa9.34□□□□□ -0.91
SHROOM3-202ENST00000466541 IZUMO4Q1ZYL8 232 aa9.34□□□□□ -0.91
SHROOM3-202ENST00000466541 TMED4Q7Z7H5 227 aa9.34□□□□□ -0.91
SHROOM3-202ENST00000466541 GDPD1Q8N9F7 314 aa9.34□□□□□ -0.91
SHROOM3-202ENST00000466541 OR10W1Q8NGF6 305 aa9.34□□□□□ -0.91
SHROOM3-202ENST00000466541 MYOZ3Q8TDC0 251 aa9.34□□□□□ -0.91
SHROOM3-202ENST00000466541 TMEM68Q96MH6 324 aa9.34□□□□□ -0.91
SHROOM3-202ENST00000466541 SLA2Q9H6Q3 261 aa9.34□□□□□ -0.91
SHROOM3-202ENST00000466541 NAA60Q9H7X0 242 aa9.34□□□□□ -0.91
SHROOM3-202ENST00000466541 PRR13Q9NZ81 148 aa9.34□□□□□ -0.91
SHROOM3-202ENST00000466541 GPR132Q9UNW8 380 aa9.34□□□□□ -0.91
SHROOM3-202ENST00000466541 TEX50A0A1B0GTY4 177 aa9.33□□□□□ -0.92
SHROOM3-202ENST00000466541 I3L521 148 aa9.33□□□□□ -0.92
SHROOM3-202ENST00000466541 OR2J3O76001 311 aa9.33□□□□□ -0.92
SHROOM3-202ENST00000466541 DEFA4P12838 97 aa9.33□□□□□ -0.92
SHROOM3-202ENST00000466541 SLC6A1P30531 599 aa9.33□□□□□ -0.92
SHROOM3-202ENST00000466541 RHOGP84095 191 aa9.33□□□□□ -0.92
SHROOM3-202ENST00000466541 SURF2Q15527 256 aaPredicted RBP9.33□□□□□ -0.92
SHROOM3-202ENST00000466541 TTC9CQ8N5M4 171 aa9.33□□□□□ -0.92
SHROOM3-202ENST00000466541 LINC00482Q8N8I6 264 aa9.33□□□□□ -0.92
SHROOM3-202ENST00000466541 SEC22AQ96IW7 307 aa9.33□□□□□ -0.92
SHROOM3-202ENST00000466541 SCGB3A2Q96PL1 93 aa9.33□□□□□ -0.92
SHROOM3-202ENST00000466541 SDHCQ99643 169 aaPredicted RBP9.33□□□□□ -0.92
SHROOM3-202ENST00000466541 QTRT1Q9BXR0 403 aaKnown RBP9.33□□□□□ -0.92
SHROOM3-202ENST00000466541 SLC2A8Q9NY64 477 aa9.33□□□□□ -0.92
SHROOM3-202ENST00000466541 A0A0G2JLM5 398 aa9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 CGB1A6NKQ9 187 aa9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 DBX1A6NMT0 343 aa9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 H3BUA1 57 aa9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 IGKV1-5P01602 117 aa9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 IGHV3-23P01764 117 aa9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 LGALS1P09382 135 aaKnown RBP9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 TRAPPC2P0DI81 140 aa9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 TRAPPC2BP0DI82 140 aa9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 PSMB6P28072 239 aa9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 CCR6P51684 374 aa9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 SLURP1P55000 103 aa9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 ZNF45Q02386 682 aa9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 ATP5G2Q06055 141 aa9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 ZNF616Q08AN1 781 aa9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 SPINK9Q5DT21 86 aa9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 SLC25A42Q86VD7 318 aa9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 SGPP2Q8IWX5 399 aa9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 OR1L8Q8NGR8 309 aa9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 RRNAD1Q96FB5 475 aaKnown RBP9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 P2RX4Q99571 388 aa9.32□□□□□ -0.92
SHROOM3-202ENST00000466541 AKIP1Q9NQ31 210 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms