RNA–Protein interactions for RNA: ENST00000466454.1

CLCA3P-202, Transcript of chloride channel accessory 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CLCA3P, Length 3,412 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3P-202ENST00000466454 RBMXP38159 391 aaKnown RBP3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 RND2P52198 227 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 GAGE5Q13069 117 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 GAGE6Q13070 117 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 CLINT1Q14677 625 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 ZNF506Q5JVG8 444 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 C1orf195Q5TG92 126 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 ZNF880Q6PDB4 577 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 SPSB3Q6PJ21 355 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 LINC00596Q86U02 117 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 VKORC1L1Q8N0U8 176 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 GBGT1Q8N5D6 347 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 MUCL1Q96DR8 90 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 SDSLQ96GA7 329 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 S100A13Q99584 98 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 CMSS1Q9BQ75 279 aaKnown RBP3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 MCTS1Q9ULC4 181 aaKnown RBP3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 NUDT3O95989 172 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 APOHP02749 345 aaPredicted RBP3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 LAGE3Q14657 143 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 RAB35Q15286 201 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 MSMO1Q15800 293 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 IAH1Q2TAA2 248 aaPredicted RBP3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 PRR31Q5SQ13 230 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 SLC35E3Q7Z769 313 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 PRR22Q8IZ63 422 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 LYG1Q8N1E2 194 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 OR51T1Q8NGJ9 327 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 OR1L8Q8NGR8 309 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 OR8U1Q8NH10 309 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 LIME1Q9H400 295 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 MED29Q9NX70 200 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 EHFQ9NZC4 300 aa3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 CHCHD2Q9Y6H1 151 aaPredicted RBP3.6□□□□□ -1.83
CLCA3P-202ENST00000466454 EML6Q6ZMW3 1958 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 OR5H1A6NKK0 313 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 TRAPPC2LH3BP13 241 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 ZFAND5O76080 213 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 NFYBP25208 207 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 SMAGPQ0VAQ4 97 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 FOXF2Q12947 444 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 ZNF726P1Q15940 193 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 C1QL2Q7Z5L3 287 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 ODF3L1Q8IXM7 274 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 UBALD2Q8IYN6 164 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 ZNF101Q8IZC7 436 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 FBXL14Q8N1E6 418 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 GALMQ96C23 342 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 RBMXL1Q96E39 390 aaKnown RBP3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 VSIRQ9H7M9 311 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 LYRM2Q9NU23 88 aaPredicted RBP3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 IGKV1D-8A0A087WSZ0 117 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 C17orf51A8MQB3 221 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 NAPSAO96009 420 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 BLVRBP30043 206 aaPredicted RBP3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 APLNRP35414 380 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 SSR4P51571 173 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 TAS2R30P59541 319 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 MFAP5Q13361 173 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 ZNF266Q14584 549 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 NMSQ5H8A3 153 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 FAM231DQ6ZW35 169 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 ZIC4Q8N9L1 334 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 MBD3L1Q8WWY6 194 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 IGFBPL1Q8WX77 278 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 GNPNAT1Q96EK6 184 aaPredicted RBP3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 PYGO2Q9BRQ0 406 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 SLC25A39Q9BZJ4 359 aaPredicted RBP3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 TMEM222Q9H0R3 208 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 RNASE7Q9H1E1 156 aaKnown RBP3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 PROK2Q9HC23 129 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 MSL2Q9HCI7 577 aa3.59□□□□□ -1.83
CLCA3P-202ENST00000466454 TDRD6O60522 2096 aaKnown RBP3.59□□□□□ -1.84
CLCA3P-202ENST00000466454 ZNF724A8MTY0 619 aa3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 ZNF814B7Z6K7 855 aa3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 SOX15O60248 233 aa3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 GNG7O60262 68 aa3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 NDUFS7O75251 213 aa3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 TSPAN15O95858 294 aa3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 IFNA17P01571 189 aa3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 PFN1P07737 140 aaKnown RBP3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 SRP19P09132 144 aaKnown RBP3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 ZNF728P0DKX0 622 aa3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 OR5H8P0DN80 308 aa3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 DSCR4P56555 118 aaPredicted RBP3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 OCIAD2Q56VL3 154 aa3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 KHDC3LQ587J8 217 aa3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 COA6Q5JTJ3 125 aaKnown RBP3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 NCMAPQ5T1S8 102 aa3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 FAM162BQ5T6X4 162 aa3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 GAPTQ8N292 157 aa3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 LMX1AQ8TE12 382 aa3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 TCTEX1D2Q8WW35 142 aa3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 SPTSSAQ969W0 71 aa3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 SIGLEC12Q96PQ1 595 aa3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 ADAT1Q9BUB4 502 aaKnown RBP3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 HES7Q9BYE0 225 aa3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 PRORYQ9H606 182 aa3.58□□□□□ -1.84
CLCA3P-202ENST00000466454 AURKAIP1Q9NWT8 199 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms