RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 A0A1B0GW64 132 aa11.37□□□□□ -0.59
COL6A1-202ENST00000463060 DNAJC9-AS1A6NH13 148 aa11.37□□□□□ -0.59
COL6A1-202ENST00000463060 FAM25EA8MYX2 175 aa11.37□□□□□ -0.59
COL6A1-202ENST00000463060 E7EUB6 86 aa11.37□□□□□ -0.59
COL6A1-202ENST00000463060 ST8SIA3O43173 380 aa11.37□□□□□ -0.59
COL6A1-202ENST00000463060 SNAPC5O75971 98 aa11.37□□□□□ -0.59
COL6A1-202ENST00000463060 MYOD1P15172 320 aa11.37□□□□□ -0.59
COL6A1-202ENST00000463060 MAS1LP35410 378 aa11.37□□□□□ -0.59
COL6A1-202ENST00000463060 HILS1P60008 231 aa11.37□□□□□ -0.59
COL6A1-202ENST00000463060 HSPE1P61604 102 aaKnown RBP11.37□□□□□ -0.59
COL6A1-202ENST00000463060 CYCSP99999 105 aaKnown RBP11.37□□□□□ -0.59
COL6A1-202ENST00000463060 ZNF562Q6V9R5 426 aa11.37□□□□□ -0.59
COL6A1-202ENST00000463060 OR52E5Q8NH55 327 aa11.37□□□□□ -0.59
COL6A1-202ENST00000463060 OR4A16Q8NH70 328 aa11.37□□□□□ -0.59
COL6A1-202ENST00000463060 ST6GAL2Q96JF0 529 aa11.37□□□□□ -0.59
COL6A1-202ENST00000463060 FYTTD1Q96QD9 318 aaKnown RBP11.37□□□□□ -0.59
COL6A1-202ENST00000463060 FKBP11Q9NYL4 201 aa11.37□□□□□ -0.59
COL6A1-202ENST00000463060 HSPB7Q9UBY9 170 aa11.37□□□□□ -0.59
COL6A1-202ENST00000463060 ZNF257Q9Y2Q1 563 aa11.37□□□□□ -0.59
COL6A1-202ENST00000463060 IGHV7-81A0A0B4J1V7 117 aa11.36□□□□□ -0.59
COL6A1-202ENST00000463060 BTBD17A6NE02 478 aa11.36□□□□□ -0.59
COL6A1-202ENST00000463060 FAM90A26D6RGX4 464 aa11.36□□□□□ -0.59
COL6A1-202ENST00000463060 M0QZK8 103 aa11.36□□□□□ -0.59
COL6A1-202ENST00000463060 MBPP02686 304 aaPredicted RBP11.36□□□□□ -0.59
COL6A1-202ENST00000463060 GIPP09681 153 aaPredicted RBP11.36□□□□□ -0.59
COL6A1-202ENST00000463060 EGR2P11161 476 aaPredicted RBP11.36□□□□□ -0.59
COL6A1-202ENST00000463060 COMPP49747 757 aaPredicted RBP11.36□□□□□ -0.59
COL6A1-202ENST00000463060 OR2B8PP59922 312 aa11.36□□□□□ -0.59
COL6A1-202ENST00000463060 CX3CL1P78423 397 aa11.36□□□□□ -0.59
COL6A1-202ENST00000463060 THOC7Q6I9Y2 204 aaKnown RBP11.36□□□□□ -0.59
COL6A1-202ENST00000463060 RBMS3Q6XE24 437 aaKnown RBP11.36□□□□□ -0.59
COL6A1-202ENST00000463060 OR5B3Q8NH48 314 aa11.36□□□□□ -0.59
COL6A1-202ENST00000463060 ZNF418Q8TF45 676 aaPredicted RBP11.36□□□□□ -0.59
COL6A1-202ENST00000463060 ASB13Q8WXK3 278 aa11.36□□□□□ -0.59
COL6A1-202ENST00000463060 CLCC1Q96S66 551 aa11.36□□□□□ -0.59
COL6A1-202ENST00000463060 RASL11BQ9BPW5 248 aa11.36□□□□□ -0.59
COL6A1-202ENST00000463060 NEURL2Q9BR09 285 aa11.36□□□□□ -0.59
COL6A1-202ENST00000463060 NDUFA4L2Q9NRX3 87 aa11.36□□□□□ -0.59
COL6A1-202ENST00000463060 SETD2Q9BYW2 2564 aaPredicted RBP11.36□□□□□ -0.59
COL6A1-202ENST00000463060 G3V3Q6 166 aa11.35□□□□□ -0.59
COL6A1-202ENST00000463060 GPR137BO60478 399 aa11.35□□□□□ -0.59
COL6A1-202ENST00000463060 CA2P00918 260 aa11.35□□□□□ -0.59
COL6A1-202ENST00000463060 SPCS3P61009 180 aa11.35□□□□□ -0.59
COL6A1-202ENST00000463060 RAP2BP61225 183 aa11.35□□□□□ -0.59
COL6A1-202ENST00000463060 BLCAPP62952 87 aa11.35□□□□□ -0.59
COL6A1-202ENST00000463060 TNFRSF9Q07011 255 aa11.35□□□□□ -0.59
COL6A1-202ENST00000463060 OR1L8Q8NGR8 309 aa11.35□□□□□ -0.59
COL6A1-202ENST00000463060 OR1S1Q8NH92 325 aa11.35□□□□□ -0.59
COL6A1-202ENST00000463060 DUX5Q96PT3 197 aa11.35□□□□□ -0.59
COL6A1-202ENST00000463060 HSPB9Q9BQS6 159 aa11.35□□□□□ -0.59
COL6A1-202ENST00000463060 C11orf1Q9H5F2 150 aa11.35□□□□□ -0.59
COL6A1-202ENST00000463060 TNFRSF19Q9NS68 423 aa11.35□□□□□ -0.59
COL6A1-202ENST00000463060 GSKIPQ9P0R6 139 aa11.35□□□□□ -0.59
COL6A1-202ENST00000463060 CACFD1Q9UGQ2 172 aa11.35□□□□□ -0.59
COL6A1-202ENST00000463060 OR51B2Q9Y5P1 312 aa11.35□□□□□ -0.59
COL6A1-202ENST00000463060 LINC01548A6NM66 108 aa11.34□□□□□ -0.59
COL6A1-202ENST00000463060 IGHG2P01859 326 aa11.34□□□□□ -0.59
COL6A1-202ENST00000463060 RNASE1P07998 156 aaKnown RBP11.34□□□□□ -0.59
COL6A1-202ENST00000463060 NKX2-1P43699 371 aaPredicted RBP11.34□□□□□ -0.59
COL6A1-202ENST00000463060 NDPQ00604 133 aa11.34□□□□□ -0.59
COL6A1-202ENST00000463060 CD83Q01151 205 aa11.34□□□□□ -0.59
COL6A1-202ENST00000463060 RAB32Q13637 225 aa11.34□□□□□ -0.59
COL6A1-202ENST00000463060 PLGLAQ15195 96 aa11.34□□□□□ -0.59
COL6A1-202ENST00000463060 Q5BKY6 102 aa11.34□□□□□ -0.59
COL6A1-202ENST00000463060 C10orf55Q5SWW7 151 aa11.34□□□□□ -0.59
COL6A1-202ENST00000463060 Q6ZS46 218 aa11.34□□□□□ -0.59
COL6A1-202ENST00000463060 PPP1R1CQ8WVI7 109 aa11.34□□□□□ -0.59
COL6A1-202ENST00000463060 RNF126Q9BV68 326 aa11.34□□□□□ -0.59
COL6A1-202ENST00000463060 RANGRFQ9HD47 186 aaPredicted RBP11.34□□□□□ -0.59
COL6A1-202ENST00000463060 NIPBLQ6KC79 2804 aaeCLIP11.33□□□□□ -0.6
COL6A1-202ENST00000463060 TRAV14DV4A0A0A6YYC5 116 aa11.33□□□□□ -0.6
COL6A1-202ENST00000463060 SH2D7A6NKC9 451 aaPredicted RBP11.33□□□□□ -0.6
COL6A1-202ENST00000463060 TEX22C9J3V5 150 aa11.33□□□□□ -0.6
COL6A1-202ENST00000463060 INS-IGF2F8WCM5 200 aa11.33□□□□□ -0.6
COL6A1-202ENST00000463060 H0YIZ8 118 aa11.33□□□□□ -0.6
COL6A1-202ENST00000463060 CCNKO75909 580 aa11.33□□□□□ -0.6
COL6A1-202ENST00000463060 VDAC2P45880 294 aaPredicted RBP11.33□□□□□ -0.6
COL6A1-202ENST00000463060 RPL27AP46776 148 aaKnown RBP11.33□□□□□ -0.6
COL6A1-202ENST00000463060 CRIP2P52943 208 aaPredicted RBP11.33□□□□□ -0.6
COL6A1-202ENST00000463060 PAX9P55771 341 aa11.33□□□□□ -0.6
COL6A1-202ENST00000463060 PRCDQ00LT1 54 aa11.33□□□□□ -0.6
COL6A1-202ENST00000463060 FXYD3Q14802 87 aa11.33□□□□□ -0.6
COL6A1-202ENST00000463060 TNXAQ16473 311 aa11.33□□□□□ -0.6
COL6A1-202ENST00000463060 Q8N2B8 174 aa11.33□□□□□ -0.6
COL6A1-202ENST00000463060 PDCD10Q9BUL8 212 aa11.33□□□□□ -0.6
COL6A1-202ENST00000463060 COMMD5Q9GZQ3 224 aa11.33□□□□□ -0.6
COL6A1-202ENST00000463060 RBKSQ9H477 322 aa11.33□□□□□ -0.6
COL6A1-202ENST00000463060 RCL1Q9Y2P8 373 aaKnown RBP11.33□□□□□ -0.6
COL6A1-202ENST00000463060 FBXO7Q9Y3I1 522 aa11.33□□□□□ -0.6
COL6A1-202ENST00000463060 CUBNO60494 3623 aa11.33□□□□□ -0.6
COL6A1-202ENST00000463060 K7EPK0 472 aa11.32□□□□□ -0.6
COL6A1-202ENST00000463060 SYNGR2O43760 224 aa11.32□□□□□ -0.6
COL6A1-202ENST00000463060 RBMXL2O75526 392 aaKnown RBP11.32□□□□□ -0.6
COL6A1-202ENST00000463060 MPC2O95563 127 aa11.32□□□□□ -0.6
COL6A1-202ENST00000463060 TMEM50AO95807 157 aa11.32□□□□□ -0.6
COL6A1-202ENST00000463060 LYL1P12980 280 aa11.32□□□□□ -0.6
COL6A1-202ENST00000463060 PSMB6P28072 239 aa11.32□□□□□ -0.6
COL6A1-202ENST00000463060 RPL15P61313 204 aaKnown RBP11.32□□□□□ -0.6
COL6A1-202ENST00000463060 POLR2GP62487 172 aaKnown RBP eCLIP11.32□□□□□ -0.6
COL6A1-202ENST00000463060 UBA52P62987 128 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms