RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 SAMD13Q5VXD3 122 aa9.61□□□□□ -0.87
TRAPPC3-205ENST00000462715 MRPL54Q6P161 138 aaKnown RBP9.61□□□□□ -0.87
TRAPPC3-205ENST00000462715 SAXO1Q8IYX7 474 aa9.61□□□□□ -0.87
TRAPPC3-205ENST00000462715 SCCPDHQ8NBX0 429 aa9.61□□□□□ -0.87
TRAPPC3-205ENST00000462715 HDHD3Q9BSH5 251 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC3-205ENST00000462715 Q9UFV3 132 aa9.61□□□□□ -0.87
TRAPPC3-205ENST00000462715 MYO7BQ6PIF6 2116 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 A0A1W2PS18 150 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 C11orf94C9JXX5 98 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 MS4A18H0YCH9 400 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 ZG16O60844 167 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 DHRS3O75911 302 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 VAMP5O95183 116 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 COX5AP20674 150 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 LGALS7P47929 136 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 ZNF90Q03938 601 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 TESK1Q15569 626 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 MS4A18Q3C1V0 323 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 GTF2H5Q6ZYL4 71 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 ZNF295-AS1Q8N0V1 137 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 ZNF808Q8N4W9 903 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 FER1L6-AS1Q8NA97 138 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 RAB1CQ92928 201 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 OR51B2Q9Y5P1 312 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 M0R1X1 148 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 FCN1O00602 326 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 SYNGR2O43760 224 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 SS18L1O75177 396 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 H1FNTQ75WM6 255 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 CNEP1R1Q8N9A8 125 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 SLC25A40Q8TBP6 338 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 TMEM186Q96B77 213 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 RBM24Q9BX46 236 aaKnown RBP9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 GNB4Q9HAV0 340 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 PSENENQ9NZ42 101 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 LHFPL6Q9Y693 200 aa9.6□□□□□ -0.87
TRAPPC3-205ENST00000462715 LRRK2Q5S007 2527 aa9.59□□□□□ -0.87
TRAPPC3-205ENST00000462715 USP9XQ93008 2570 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC3-205ENST00000462715 DIDO1Q9BTC0 2240 aaKnown RBP9.59□□□□□ -0.87
TRAPPC3-205ENST00000462715 TRAPPC2LH3BP13 241 aa9.59□□□□□ -0.87
TRAPPC3-205ENST00000462715 SH2D1BO14796 132 aa9.59□□□□□ -0.87
TRAPPC3-205ENST00000462715 CGAP01215 116 aa9.59□□□□□ -0.87
TRAPPC3-205ENST00000462715 LINC00869P0C866 280 aa9.59□□□□□ -0.87
TRAPPC3-205ENST00000462715 FAM214BQ7L5A3 538 aa9.59□□□□□ -0.87
TRAPPC3-205ENST00000462715 TCF23Q7RTU1 214 aa9.59□□□□□ -0.87
TRAPPC3-205ENST00000462715 NINJ1Q92982 152 aa9.59□□□□□ -0.87
TRAPPC3-205ENST00000462715 DOCK7Q96N67 2140 aa9.59□□□□□ -0.87
TRAPPC3-205ENST00000462715 RNF114Q9Y508 228 aa9.59□□□□□ -0.87
TRAPPC3-205ENST00000462715 FASNP49327 2511 aaKnown RBP9.59□□□□□ -0.87
TRAPPC3-205ENST00000462715 KIAA1549Q9HCM3 1950 aa9.59□□□□□ -0.87
TRAPPC3-205ENST00000462715 IGKV3D-15A0A087WSY6 115 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 CA2P00918 260 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 SELENOVP59797 346 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 SCGB2A2Q13296 93 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 OR10G9Q8NGN4 311 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 OR10G7Q8NGN6 311 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 ITLN2Q8WWU7 325 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 OR4C12Q96R67 309 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 FAM90A10PA6NDY2 464 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 FAM90A18PA6NE21 464 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 FAM90A16PA6NEW6 464 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 FAM90A20PA6NIJ5 464 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 FAM90A8PA6NJQ4 464 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 FAM90A7PA6NKC0 464 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 FAM90A22PA8MWA6 464 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 FAM90A12PA8MX19 464 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 FAM90A5PA8MXJ8 464 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 FAM90A23PA8MXZ1 464 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 PAGE4O60829 102 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 FAM90A15PP0C7V4 464 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 FAM90A13PP0C7W8 464 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 FAM90A14PP0C7W9 464 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 FAM90A24PP0C7X0 464 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 CBLN1P23435 193 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 NPPCP23582 126 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 S100A7P31151 101 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 TMEM267Q0VDI3 215 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 FOXF2Q12947 444 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 GUSBP1Q15486 140 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 BVES-AS1Q5T3Y7 98 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 FAM162BQ5T6X4 162 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 AMMECR1LQ6DCA0 310 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 Q6ZVH6 145 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 FAM58AQ8N1B3 248 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 QTRT1Q9BXR0 403 aaKnown RBP9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 DOPEY1Q5JWR5 2465 aa9.58□□□□□ -0.88
TRAPPC3-205ENST00000462715 TRAV34A0A0B4J273 112 aa9.57□□□□□ -0.88
TRAPPC3-205ENST00000462715 ZNF716A6NP11 495 aa9.57□□□□□ -0.88
TRAPPC3-205ENST00000462715 PDCD6O75340 191 aa9.57□□□□□ -0.88
TRAPPC3-205ENST00000462715 TUSC2O75896 110 aa9.57□□□□□ -0.88
TRAPPC3-205ENST00000462715 OR10J4P0C629 311 aa9.57□□□□□ -0.88
TRAPPC3-205ENST00000462715 KIR2DL2P43627 348 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC3-205ENST00000462715 GNB1P62873 340 aa9.57□□□□□ -0.88
TRAPPC3-205ENST00000462715 TUSC5Q8IXB3 177 aa9.57□□□□□ -0.88
TRAPPC3-205ENST00000462715 CYYR1Q96J86 154 aa9.57□□□□□ -0.88
TRAPPC3-205ENST00000462715 CLUHP3Q96NS8 147 aa9.57□□□□□ -0.88
TRAPPC3-205ENST00000462715 PNRC2Q9NPJ4 139 aaKnown RBP9.57□□□□□ -0.88
TRAPPC3-205ENST00000462715 NCOA6Q14686 2063 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC3-205ENST00000462715 MED12LQ86YW9 2145 aa9.57□□□□□ -0.88
TRAPPC3-205ENST00000462715 PCNX1Q96RV3 2341 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms