RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 REG1BP48304 166 aa12.35□□□□□ -0.43
SF3A3-203ENST00000461869 BRWD1-AS2P59051 145 aa12.35□□□□□ -0.43
SF3A3-203ENST00000461869 HABP2Q14520 560 aaPredicted RBP12.35□□□□□ -0.43
SF3A3-203ENST00000461869 H2BFWTQ7Z2G1 175 aa12.35□□□□□ -0.43
SF3A3-203ENST00000461869 THAP6Q8TBB0 222 aa12.35□□□□□ -0.43
SF3A3-203ENST00000461869 PIFOQ8TCI5 191 aa12.35□□□□□ -0.43
SF3A3-203ENST00000461869 ZNF702PQ9H963 129 aa12.35□□□□□ -0.43
SF3A3-203ENST00000461869 SERTAD4Q9NUC0 356 aa12.35□□□□□ -0.43
SF3A3-203ENST00000461869 CACFD1Q9UGQ2 172 aa12.35□□□□□ -0.43
SF3A3-203ENST00000461869 IGHV1-3A0A0C4DH29 117 aa12.34□□□□□ -0.43
SF3A3-203ENST00000461869 SMLR1H3BR10 107 aa12.34□□□□□ -0.43
SF3A3-203ENST00000461869 KRASP01116 189 aa12.34□□□□□ -0.43
SF3A3-203ENST00000461869 RLN2P04090 185 aa12.34□□□□□ -0.43
SF3A3-203ENST00000461869 G6PCP35575 357 aa12.34□□□□□ -0.43
SF3A3-203ENST00000461869 LINC00205P59089 165 aa12.34□□□□□ -0.43
SF3A3-203ENST00000461869 POU2AF1Q16633 256 aa12.34□□□□□ -0.43
SF3A3-203ENST00000461869 DMBX1Q8NFW5 382 aa12.34□□□□□ -0.43
SF3A3-203ENST00000461869 OR4D5Q8NGN0 318 aa12.34□□□□□ -0.43
SF3A3-203ENST00000461869 OR1S1Q8NH92 325 aa12.34□□□□□ -0.43
SF3A3-203ENST00000461869 GPR146Q96CH1 333 aa12.34□□□□□ -0.43
SF3A3-203ENST00000461869 FLYWCH2Q96CP2 140 aaKnown RBP12.34□□□□□ -0.43
SF3A3-203ENST00000461869 CITED2Q99967 270 aaPredicted RBP12.34□□□□□ -0.43
SF3A3-203ENST00000461869 CACNG5Q9UF02 275 aa12.34□□□□□ -0.43
SF3A3-203ENST00000461869 FAM90A26D6RGX4 464 aa12.33□□□□□ -0.44
SF3A3-203ENST00000461869 ST8SIA3O43173 380 aa12.33□□□□□ -0.44
SF3A3-203ENST00000461869 MPC2O95563 127 aa12.33□□□□□ -0.44
SF3A3-203ENST00000461869 SCGB1D2O95969 90 aa12.33□□□□□ -0.44
SF3A3-203ENST00000461869 P0C879 139 aa12.33□□□□□ -0.44
SF3A3-203ENST00000461869 SLC25A4P12235 298 aa12.33□□□□□ -0.44
SF3A3-203ENST00000461869 S100A10P60903 97 aa12.33□□□□□ -0.44
SF3A3-203ENST00000461869 IL15RAQ13261 267 aa12.33□□□□□ -0.44
SF3A3-203ENST00000461869 LRRC37A5PQ49AS3 106 aa12.33□□□□□ -0.44
SF3A3-203ENST00000461869 TMEM177Q53S58 311 aa12.33□□□□□ -0.44
SF3A3-203ENST00000461869 C11orf87Q6NUJ2 197 aa12.33□□□□□ -0.44
SF3A3-203ENST00000461869 MOB3BQ86TA1 216 aa12.33□□□□□ -0.44
SF3A3-203ENST00000461869 Q8N2B8 174 aa12.33□□□□□ -0.44
SF3A3-203ENST00000461869 VSTM2AQ8TAG5 236 aa12.33□□□□□ -0.44
SF3A3-203ENST00000461869 HARBI1Q96MB7 349 aa12.33□□□□□ -0.44
SF3A3-203ENST00000461869 A0A0G2JRQ6 117 aa12.32□□□□□ -0.44
SF3A3-203ENST00000461869 A0A1W2PPI3 338 aa12.32□□□□□ -0.44
SF3A3-203ENST00000461869 HMSDA8MTL9 139 aa12.32□□□□□ -0.44
SF3A3-203ENST00000461869 ADARB2-AS1A8MUL3 147 aa12.32□□□□□ -0.44
SF3A3-203ENST00000461869 G3V3Q6 166 aa12.32□□□□□ -0.44
SF3A3-203ENST00000461869 SHOXO15266 292 aa12.32□□□□□ -0.44
SF3A3-203ENST00000461869 NKX2-1P43699 371 aaPredicted RBP12.32□□□□□ -0.44
SF3A3-203ENST00000461869 LGALS7P47929 136 aa12.32□□□□□ -0.44
SF3A3-203ENST00000461869 RAB32Q13637 225 aa12.32□□□□□ -0.44
SF3A3-203ENST00000461869 DIAPH2-AS1Q14236 149 aa12.32□□□□□ -0.44
SF3A3-203ENST00000461869 MALSU1Q96EH3 234 aa12.32□□□□□ -0.44
SF3A3-203ENST00000461869 RHOVQ96L33 236 aa12.32□□□□□ -0.44
SF3A3-203ENST00000461869 RNF5Q99942 180 aa12.32□□□□□ -0.44
SF3A3-203ENST00000461869 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.32□□□□□ -0.44
SF3A3-203ENST00000461869 FXYD6-FXYD2A0A087WZ82 144 aa12.31□□□□□ -0.44
SF3A3-203ENST00000461869 TRAV14DV4A0A0A6YYC5 116 aa12.31□□□□□ -0.44
SF3A3-203ENST00000461869 WRBO00258 174 aa12.31□□□□□ -0.44
SF3A3-203ENST00000461869 PITX3O75364 302 aa12.31□□□□□ -0.44
SF3A3-203ENST00000461869 IGKV1-16P04430 117 aa12.31□□□□□ -0.44
SF3A3-203ENST00000461869 CD33P20138 364 aa12.31□□□□□ -0.44
SF3A3-203ENST00000461869 PVALBP20472 110 aaPredicted RBP12.31□□□□□ -0.44
SF3A3-203ENST00000461869 C4BPBP20851 252 aa12.31□□□□□ -0.44
SF3A3-203ENST00000461869 CD1BP29016 333 aa12.31□□□□□ -0.44
SF3A3-203ENST00000461869 PRSS54Q6PEW0 395 aa12.31□□□□□ -0.44
SF3A3-203ENST00000461869 TMEM65Q6PI78 240 aa12.31□□□□□ -0.44
SF3A3-203ENST00000461869 LHFPL4Q7Z7J7 247 aa12.31□□□□□ -0.44
SF3A3-203ENST00000461869 FOXRED2Q8IWF2 684 aa12.31□□□□□ -0.44
SF3A3-203ENST00000461869 WDR89Q96FK6 387 aaPredicted RBP12.31□□□□□ -0.44
SF3A3-203ENST00000461869 TMEM140Q9NV12 185 aa12.31□□□□□ -0.44
SF3A3-203ENST00000461869 TCF19Q9Y242 345 aa12.31□□□□□ -0.44
SF3A3-203ENST00000461869 KMT2CQ8NEZ4 4911 aaKnown RBP12.3□□□□□ -0.44
SF3A3-203ENST00000461869 RBMXL2O75526 392 aaKnown RBP12.3□□□□□ -0.44
SF3A3-203ENST00000461869 MED6O75586 246 aa12.3□□□□□ -0.44
SF3A3-203ENST00000461869 DEDDO75618 318 aa12.3□□□□□ -0.44
SF3A3-203ENST00000461869 MBPP02686 304 aaPredicted RBP12.3□□□□□ -0.44
SF3A3-203ENST00000461869 LYL1P12980 280 aa12.3□□□□□ -0.44
SF3A3-203ENST00000461869 IGLL1P15814 213 aa12.3□□□□□ -0.44
SF3A3-203ENST00000461869 NUP62P37198 522 aaPredicted RBP12.3□□□□□ -0.44
SF3A3-203ENST00000461869 RPS16P62249 146 aaKnown RBP12.3□□□□□ -0.44
SF3A3-203ENST00000461869 VMA21Q3ZAQ7 101 aa12.3□□□□□ -0.44
SF3A3-203ENST00000461869 SSX9Q7RTT3 188 aa12.3□□□□□ -0.44
SF3A3-203ENST00000461869 TMEM219Q86XT9 240 aa12.3□□□□□ -0.44
SF3A3-203ENST00000461869 DYNAPQ8N1N2 210 aa12.3□□□□□ -0.44
SF3A3-203ENST00000461869 WFDC9Q8NEX5 89 aa12.3□□□□□ -0.44
SF3A3-203ENST00000461869 OR4A5Q8NH83 315 aa12.3□□□□□ -0.44
SF3A3-203ENST00000461869 WIPF2Q8TF74 440 aaPredicted RBP12.3□□□□□ -0.44
SF3A3-203ENST00000461869 TSNAXQ99598 290 aaKnown RBP12.3□□□□□ -0.44
SF3A3-203ENST00000461869 PRSS22Q9GZN4 317 aa12.3□□□□□ -0.44
SF3A3-203ENST00000461869 WNT10AQ9GZT5 417 aa12.3□□□□□ -0.44
SF3A3-203ENST00000461869 BET1LQ9NYM9 111 aa12.3□□□□□ -0.44
SF3A3-203ENST00000461869 MBD2Q9UBB5 411 aa12.3□□□□□ -0.44
SF3A3-203ENST00000461869 LSM5Q9Y4Y9 91 aaKnown RBP12.3□□□□□ -0.44
SF3A3-203ENST00000461869 HILPDAQ9Y5L2 63 aa12.3□□□□□ -0.44
SF3A3-203ENST00000461869 A0A1W2PRX2 142 aa12.29□□□□□ -0.44
SF3A3-203ENST00000461869 A6NDX4 124 aa12.29□□□□□ -0.44
SF3A3-203ENST00000461869 E5RGE8 158 aa12.29□□□□□ -0.44
SF3A3-203ENST00000461869 K7EPK0 472 aa12.29□□□□□ -0.44
SF3A3-203ENST00000461869 SPDEFO95238 335 aa12.29□□□□□ -0.44
SF3A3-203ENST00000461869 LY86O95711 162 aa12.29□□□□□ -0.44
SF3A3-203ENST00000461869 FGF2P09038 288 aa12.29□□□□□ -0.44
SF3A3-203ENST00000461869 BRS3P32247 399 aa12.29□□□□□ -0.44
SF3A3-203ENST00000461869 ID3Q02535 119 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms