RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 PPP1CCP36873 323 aaKnown RBP13.01□□□□□ -0.33
TOP3A-202ENST00000461127 CEACAM6P40199 344 aa13.01□□□□□ -0.33
TOP3A-202ENST00000461127 HERV-K104P61576 105 aa13.01□□□□□ -0.33
TOP3A-202ENST00000461127 HTD2P86397 168 aa13.01□□□□□ -0.33
TOP3A-202ENST00000461127 GNMTQ14749 295 aa13.01□□□□□ -0.33
TOP3A-202ENST00000461127 RPEL1Q2QD12 228 aa13.01□□□□□ -0.33
TOP3A-202ENST00000461127 CEMP1Q6PRD7 247 aaPredicted RBP13.01□□□□□ -0.33
TOP3A-202ENST00000461127 OR52L2PQ8NGH6 319 aa13.01□□□□□ -0.33
TOP3A-202ENST00000461127 CLCC1Q96S66 551 aa13.01□□□□□ -0.33
TOP3A-202ENST00000461127 OR1A1Q9P1Q5 309 aa13.01□□□□□ -0.33
TOP3A-202ENST00000461127 PEF1Q9UBV8 284 aaKnown RBP13.01□□□□□ -0.33
TOP3A-202ENST00000461127 SAA2-SAA4A0A096LPE2 208 aa13□□□□□ -0.33
TOP3A-202ENST00000461127 OR5H14A6NHG9 310 aa13□□□□□ -0.33
TOP3A-202ENST00000461127 H7C2Y5 167 aa13□□□□□ -0.33
TOP3A-202ENST00000461127 PTTG1O95997 202 aa13□□□□□ -0.33
TOP3A-202ENST00000461127 ZNF735P0CB33 412 aa13□□□□□ -0.33
TOP3A-202ENST00000461127 SAA2P0DJI9 122 aaPredicted RBP13□□□□□ -0.33
TOP3A-202ENST00000461127 AADACP22760 399 aa13□□□□□ -0.33
TOP3A-202ENST00000461127 NFYAP23511 347 aaPredicted RBP13□□□□□ -0.33
TOP3A-202ENST00000461127 FAM71F2Q6NXP2 309 aa13□□□□□ -0.33
TOP3A-202ENST00000461127 IDO2Q6ZQW0 420 aa13□□□□□ -0.33
TOP3A-202ENST00000461127 OR2AK2Q8NG84 335 aa13□□□□□ -0.33
TOP3A-202ENST00000461127 ZNF2Q9BSG1 426 aaPredicted RBP13□□□□□ -0.33
TOP3A-202ENST00000461127 METTL1Q9UBP6 276 aaKnown RBP13□□□□□ -0.33
TOP3A-202ENST00000461127 RYR1P21817 5038 aa13□□□□□ -0.33
TOP3A-202ENST00000461127 YPEL1O60688 119 aa12.99□□□□□ -0.33
TOP3A-202ENST00000461127 DEDDO75618 318 aa12.99□□□□□ -0.33
TOP3A-202ENST00000461127 CA2P00918 260 aa12.99□□□□□ -0.33
TOP3A-202ENST00000461127 CD7P09564 240 aa12.99□□□□□ -0.33
TOP3A-202ENST00000461127 MC5RP33032 325 aa12.99□□□□□ -0.33
TOP3A-202ENST00000461127 CCR6P51684 374 aa12.99□□□□□ -0.33
TOP3A-202ENST00000461127 NRARPQ7Z6K4 114 aa12.99□□□□□ -0.33
TOP3A-202ENST00000461127 H1FOOQ8IZA3 346 aaPredicted RBP12.99□□□□□ -0.33
TOP3A-202ENST00000461127 GIMAP1Q8WWP7 306 aa12.99□□□□□ -0.33
TOP3A-202ENST00000461127 YPEL2Q96QA6 119 aa12.99□□□□□ -0.33
TOP3A-202ENST00000461127 RDH8Q9NYR8 311 aa12.99□□□□□ -0.33
TOP3A-202ENST00000461127 PIPOXQ9P0Z9 390 aa12.99□□□□□ -0.33
TOP3A-202ENST00000461127 HECTD4Q9Y4D8 3996 aa12.98□□□□□ -0.33
TOP3A-202ENST00000461127 DNAH10Q8IVF4 4471 aa12.98□□□□□ -0.33
TOP3A-202ENST00000461127 NDUFB8O95169 186 aa12.98□□□□□ -0.33
TOP3A-202ENST00000461127 PPYP01298 95 aa12.98□□□□□ -0.33
TOP3A-202ENST00000461127 BTCP35070 178 aa12.98□□□□□ -0.33
TOP3A-202ENST00000461127 MECP2P51608 486 aaKnown RBP12.98□□□□□ -0.33
TOP3A-202ENST00000461127 FXYD4P59646 89 aa12.98□□□□□ -0.33
TOP3A-202ENST00000461127 TRIM16LQ309B1 348 aa12.98□□□□□ -0.33
TOP3A-202ENST00000461127 CD300EQ496F6 205 aaPredicted RBP12.98□□□□□ -0.33
TOP3A-202ENST00000461127 LY6G6FQ5SQ64 297 aa12.98□□□□□ -0.33
TOP3A-202ENST00000461127 DHRS11Q6UWP2 260 aa12.98□□□□□ -0.33
TOP3A-202ENST00000461127 OR5T1Q8NG75 326 aa12.98□□□□□ -0.33
TOP3A-202ENST00000461127 TERB2Q8NHR7 220 aa12.98□□□□□ -0.33
TOP3A-202ENST00000461127 GRPEL2Q8TAA5 225 aa12.98□□□□□ -0.33
TOP3A-202ENST00000461127 DYNLRB2Q8TF09 96 aa12.98□□□□□ -0.33
TOP3A-202ENST00000461127 RNF5Q99942 180 aa12.98□□□□□ -0.33
TOP3A-202ENST00000461127 WFDC10AQ9H1F0 79 aa12.98□□□□□ -0.33
TOP3A-202ENST00000461127 COPZ2Q9P299 210 aa12.98□□□□□ -0.33
TOP3A-202ENST00000461127 WASHC3Q9Y3C0 194 aa12.98□□□□□ -0.33
TOP3A-202ENST00000461127 RBM7Q9Y580 266 aaKnown RBP12.98□□□□□ -0.33
TOP3A-202ENST00000461127 PGAM2P15259 253 aa12.97□□□□□ -0.33
TOP3A-202ENST00000461127 FXYD3Q14802 87 aa12.97□□□□□ -0.33
TOP3A-202ENST00000461127 RBMS2Q15434 407 aaKnown RBP12.97□□□□□ -0.33
TOP3A-202ENST00000461127 GUCA2BQ16661 112 aa12.97□□□□□ -0.33
TOP3A-202ENST00000461127 EDARADDQ8WWZ3 215 aa12.97□□□□□ -0.33
TOP3A-202ENST00000461127 SCGB3A2Q96PL1 93 aa12.97□□□□□ -0.33
TOP3A-202ENST00000461127 SLC25A21Q9BQT8 299 aaPredicted RBP12.97□□□□□ -0.33
TOP3A-202ENST00000461127 OVOL2Q9BRP0 275 aa12.97□□□□□ -0.33
TOP3A-202ENST00000461127 OR2W1Q9Y3N9 320 aa12.97□□□□□ -0.33
TOP3A-202ENST00000461127 RAB29O14966 203 aa12.96□□□□□ -0.33
TOP3A-202ENST00000461127 TUSC2O75896 110 aa12.96□□□□□ -0.33
TOP3A-202ENST00000461127 LGALS9CQ6DKI2 356 aa12.96□□□□□ -0.33
TOP3A-202ENST00000461127 ZNF343Q6P1L6 599 aa12.96□□□□□ -0.33
TOP3A-202ENST00000461127 PLET1Q6UQ28 207 aa12.96□□□□□ -0.33
TOP3A-202ENST00000461127 SLC16A13Q7RTY0 426 aa12.96□□□□□ -0.33
TOP3A-202ENST00000461127 BVESQ8NE79 360 aa12.96□□□□□ -0.33
TOP3A-202ENST00000461127 MOB3AQ96BX8 217 aa12.96□□□□□ -0.33
TOP3A-202ENST00000461127 USMG5Q96IX5 58 aa12.96□□□□□ -0.33
TOP3A-202ENST00000461127 TSNAXQ99598 290 aaKnown RBP12.96□□□□□ -0.33
TOP3A-202ENST00000461127 A0A0J9YWU9 116 aa12.95□□□□□ -0.34
TOP3A-202ENST00000461127 ZNF785A8K8V0 405 aa12.95□□□□□ -0.34
TOP3A-202ENST00000461127 H0YJW9 148 aa12.95□□□□□ -0.34
TOP3A-202ENST00000461127 NDUFB6O95139 128 aa12.95□□□□□ -0.34
TOP3A-202ENST00000461127 SPDEFO95238 335 aa12.95□□□□□ -0.34
TOP3A-202ENST00000461127 TCRBP04435 133 aa12.95□□□□□ -0.34
TOP3A-202ENST00000461127 RLN1P04808 185 aa12.95□□□□□ -0.34
TOP3A-202ENST00000461127 CT45A6P0DMU7 189 aa12.95□□□□□ -0.34
TOP3A-202ENST00000461127 CT45A5P0DMU8 189 aa12.95□□□□□ -0.34
TOP3A-202ENST00000461127 CT45A7P0DMV0 189 aa12.95□□□□□ -0.34
TOP3A-202ENST00000461127 LGALS7P47929 136 aa12.95□□□□□ -0.34
TOP3A-202ENST00000461127 PSG5Q15238 335 aa12.95□□□□□ -0.34
TOP3A-202ENST00000461127 GLDNQ6ZMI3 551 aaPredicted RBP12.95□□□□□ -0.34
TOP3A-202ENST00000461127 LHFPL1Q86WI0 220 aa12.95□□□□□ -0.34
TOP3A-202ENST00000461127 OR13C8Q8NGS7 320 aa12.95□□□□□ -0.34
TOP3A-202ENST00000461127 MARCH1Q8TCQ1 289 aa12.95□□□□□ -0.34
TOP3A-202ENST00000461127 SECTM1Q8WVN6 248 aa12.95□□□□□ -0.34
TOP3A-202ENST00000461127 TMEM68Q96MH6 324 aa12.95□□□□□ -0.34
TOP3A-202ENST00000461127 GGTLC1Q9BX51 225 aa12.95□□□□□ -0.34
TOP3A-202ENST00000461127 SLC5A7Q9GZV3 580 aa12.95□□□□□ -0.34
TOP3A-202ENST00000461127 PARP12Q9H0J9 701 aaKnown RBP12.95□□□□□ -0.34
TOP3A-202ENST00000461127 FXYD6Q9H0Q3 95 aa12.95□□□□□ -0.34
TOP3A-202ENST00000461127 IFI27L2Q9H2X8 130 aa12.95□□□□□ -0.34
TOP3A-202ENST00000461127 TRBV12-3P01733 135 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms