RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 NEURL3Q96EH8 262 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 SMIM12Q96EX1 92 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 MRPL48Q96GC5 212 aaKnown RBP1.96□□□□□ -2.1
HPS3-203ENST00000460822 ZNF649Q9BS31 505 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 RSPO3Q9BXY4 272 aaPredicted RBP1.96□□□□□ -2.1
HPS3-203ENST00000460822 MRPL20Q9BYC9 149 aaKnown RBP1.96□□□□□ -2.1
HPS3-203ENST00000460822 PLA2G12AQ9BZM1 189 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 FGF23Q9GZV9 251 aaPredicted RBP1.96□□□□□ -2.1
HPS3-203ENST00000460822 SLC25A31Q9H0C2 315 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 MS4A6AQ9H2W1 248 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 OR52D1Q9H346 318 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 MAP1LC3AQ9H492 121 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 RPP21Q9H633 154 aaKnown RBP1.96□□□□□ -2.1
HPS3-203ENST00000460822 ZNF331Q9NQX6 463 aaPredicted RBP1.96□□□□□ -2.1
HPS3-203ENST00000460822 CA10Q9NS85 328 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 PRR34Q9NV39 138 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 RBM12B-AS1Q9P1G2 102 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 VPS29Q9UBQ0 182 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 ANGPT4Q9Y264 503 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 OBSL1O75147 1896 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 IGLV1-50A0A075B6I6 118 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.96□□□□□ -2.1
HPS3-203ENST00000460822 LOC389332A0A1B0GUA5 103 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 HMSDA8MTL9 139 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 CHST10O43529 356 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 GSTZ1O43708 216 aaPredicted RBP1.96□□□□□ -2.1
HPS3-203ENST00000460822 GATBO75879 557 aaKnown RBP1.96□□□□□ -2.1
HPS3-203ENST00000460822 SNAPC5O75971 98 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 OR2A4O95047 310 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 UBL3O95164 117 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 EPPINO95925 133 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 IGLV2-8P01709 118 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 IGLV3-27P01718 113 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 IFNA4P05014 189 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 ISG15P05161 165 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 FABP1P07148 127 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 SMIM6P0DI80 62 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 AKR1C4P17516 323 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 RPS12P25398 132 aaKnown RBP1.96□□□□□ -2.1
HPS3-203ENST00000460822 IL3RAP26951 378 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 GDI2P50395 445 aaKnown RBP1.96□□□□□ -2.1
HPS3-203ENST00000460822 PFN3P60673 137 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 DEFA5Q01523 94 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 HTR4Q13639 388 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 ZNF791Q3KP31 576 aaPredicted RBP1.96□□□□□ -2.1
HPS3-203ENST00000460822 FAM78AQ5JUQ0 283 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 CST9Q5W186 159 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 ZNF660Q6AZW8 331 aaPredicted RBP1.96□□□□□ -2.1
HPS3-203ENST00000460822 SMARCD3Q6STE5 483 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 ZNF433Q8N7K0 673 aaPredicted RBP1.96□□□□□ -2.1
HPS3-203ENST00000460822 GATD1Q8NB37 220 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 PXT1Q8NFP0 134 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 OR2M7Q8NG81 312 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 OR1M1Q8NGA1 313 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 GPR32P1Q8NGA4 272 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 OR4D11Q8NGI4 311 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 OR4P4Q8NGL7 312 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 OR52N1Q8NH53 320 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 OR5W2Q8NH69 310 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 PHOSPHO2Q8TCD6 241 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 SFT2D1Q8WV19 159 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 SMIM4Q8WVI0 70 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 SRSF12Q8WXF0 261 aaKnown RBP1.96□□□□□ -2.1
HPS3-203ENST00000460822 RAB8BQ92930 207 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 PPCDCQ96CD2 204 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 OTUB2Q96DC9 234 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 PACRGQ96M98 296 aaPredicted RBP1.96□□□□□ -2.1
HPS3-203ENST00000460822 OR2A7Q96R45 310 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 WFDC6Q9BQY6 131 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 BCL2L14Q9BZR8 327 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 IFI27L2Q9H2X8 130 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 PLEKHF2Q9H8W4 249 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 BIN3Q9NQY0 253 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 FARSAQ9Y285 508 aaKnown RBP1.96□□□□□ -2.1
HPS3-203ENST00000460822 INSIG2Q9Y5U4 225 aa1.96□□□□□ -2.1
HPS3-203ENST00000460822 SNRNP200O75643 2136 aaKnown RBP1.95□□□□□ -2.1
HPS3-203ENST00000460822 SPTBP11277 2137 aa1.95□□□□□ -2.1
HPS3-203ENST00000460822 USP34Q70CQ2 3546 aa1.95□□□□□ -2.1
HPS3-203ENST00000460822 MPDZO75970 2070 aa1.95□□□□□ -2.1
HPS3-203ENST00000460822 BRCA2P51587 3418 aa1.95□□□□□ -2.1
HPS3-203ENST00000460822 GNG14A0A1W2PPG7 69 aa1.95□□□□□ -2.1
HPS3-203ENST00000460822 C8orf87E5RJ46 101 aa1.95□□□□□ -2.1
HPS3-203ENST00000460822 E7EQ34 232 aa1.95□□□□□ -2.1
HPS3-203ENST00000460822 GPR31O00270 319 aa1.95□□□□□ -2.1
HPS3-203ENST00000460822 KPNA3O00505 521 aaPredicted RBP1.95□□□□□ -2.1
HPS3-203ENST00000460822 ARPC5O15511 151 aa1.95□□□□□ -2.1
HPS3-203ENST00000460822 CREBL2O60519 120 aaPredicted RBP1.95□□□□□ -2.1
HPS3-203ENST00000460822 EIF1BO60739 113 aaKnown RBP1.95□□□□□ -2.1
HPS3-203ENST00000460822 ATG12O94817 140 aa1.95□□□□□ -2.1
HPS3-203ENST00000460822 IGF2P01344 180 aa1.95□□□□□ -2.1
HPS3-203ENST00000460822 C8GP07360 202 aa1.95□□□□□ -2.1
HPS3-203ENST00000460822 OR4Q2P0C623 313 aa1.95□□□□□ -2.1
HPS3-203ENST00000460822 SMIM10L2AP0DMW4 78 aa1.95□□□□□ -2.1
HPS3-203ENST00000460822 SMIM10L2BP0DMW5 78 aa1.95□□□□□ -2.1
HPS3-203ENST00000460822 ADRB3P13945 408 aa1.95□□□□□ -2.1
HPS3-203ENST00000460822 CD99P14209 185 aa1.95□□□□□ -2.1
HPS3-203ENST00000460822 ADCYAP1P18509 176 aa1.95□□□□□ -2.1
HPS3-203ENST00000460822 CCR7P32248 378 aa1.95□□□□□ -2.1
HPS3-203ENST00000460822 EIF1P41567 113 aaKnown RBP1.95□□□□□ -2.1
HPS3-203ENST00000460822 SMAGPQ0VAQ4 97 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms