RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 A0A087WW49 117 aa12.69□□□□□ -0.38
SMARCD3-204ENST00000460431 TRAV3A0A0B4J244 114 aa12.69□□□□□ -0.38
SMARCD3-204ENST00000460431 HMX3A6NHT5 357 aa12.69□□□□□ -0.38
SMARCD3-204ENST00000460431 GSTZ1O43708 216 aaPredicted RBP12.69□□□□□ -0.38
SMARCD3-204ENST00000460431 RBMXL2O75526 392 aaKnown RBP12.69□□□□□ -0.38
SMARCD3-204ENST00000460431 HOXD3P31249 432 aaPredicted RBP12.69□□□□□ -0.38
SMARCD3-204ENST00000460431 KRTAP10-11P60412 298 aa12.69□□□□□ -0.38
SMARCD3-204ENST00000460431 TBC1D26Q86UD7 250 aa12.69□□□□□ -0.38
SMARCD3-204ENST00000460431 SLC25A42Q86VD7 318 aa12.69□□□□□ -0.38
SMARCD3-204ENST00000460431 MRAPQ8TCY5 172 aa12.69□□□□□ -0.38
SMARCD3-204ENST00000460431 DCUN1D4Q92564 292 aa12.69□□□□□ -0.38
SMARCD3-204ENST00000460431 ZNF486Q96H40 463 aaPredicted RBP12.69□□□□□ -0.38
SMARCD3-204ENST00000460431 FYTTD1Q96QD9 318 aaKnown RBP12.69□□□□□ -0.38
SMARCD3-204ENST00000460431 DNAH3Q8TD57 4116 aa12.69□□□□□ -0.38
SMARCD3-204ENST00000460431 TRBV9A0A0B4J1U6 114 aa12.68□□□□□ -0.38
SMARCD3-204ENST00000460431 FABP12A6NFH5 140 aa12.68□□□□□ -0.38
SMARCD3-204ENST00000460431 CGB1A6NKQ9 187 aa12.68□□□□□ -0.38
SMARCD3-204ENST00000460431 MARCH11A6NNE9 402 aa12.68□□□□□ -0.38
SMARCD3-204ENST00000460431 MYOD1P15172 320 aa12.68□□□□□ -0.38
SMARCD3-204ENST00000460431 RPA2P15927 270 aa12.68□□□□□ -0.38
SMARCD3-204ENST00000460431 SLURP1P55000 103 aa12.68□□□□□ -0.38
SMARCD3-204ENST00000460431 ERVK-16P61578 105 aa12.68□□□□□ -0.38
SMARCD3-204ENST00000460431 RND3P61587 244 aa12.68□□□□□ -0.38
SMARCD3-204ENST00000460431 ZNF45Q02386 682 aa12.68□□□□□ -0.38
SMARCD3-204ENST00000460431 C9orf66Q5T8R8 295 aa12.68□□□□□ -0.38
SMARCD3-204ENST00000460431 ZNF343Q6P1L6 599 aa12.68□□□□□ -0.38
SMARCD3-204ENST00000460431 DLX4Q92988 240 aaPredicted RBP12.68□□□□□ -0.38
SMARCD3-204ENST00000460431 ZNF257Q9Y2Q1 563 aa12.68□□□□□ -0.38
SMARCD3-204ENST00000460431 NPIPB5A8MRT5 1133 aa12.67□□□□□ -0.38
SMARCD3-204ENST00000460431 SEC14L6B5MCN3 397 aa12.67□□□□□ -0.38
SMARCD3-204ENST00000460431 KRASP01116 189 aa12.67□□□□□ -0.38
SMARCD3-204ENST00000460431 PRH1P02810 166 aa12.67□□□□□ -0.38
SMARCD3-204ENST00000460431 CRYGCP07315 174 aa12.67□□□□□ -0.38
SMARCD3-204ENST00000460431 PGAM2P15259 253 aa12.67□□□□□ -0.38
SMARCD3-204ENST00000460431 PTBP1P26599 531 aaKnown RBP eCLIP12.67□□□□□ -0.38
SMARCD3-204ENST00000460431 OR2B8PP59922 312 aa12.67□□□□□ -0.38
SMARCD3-204ENST00000460431 DEFA5Q01523 94 aa12.67□□□□□ -0.38
SMARCD3-204ENST00000460431 MEF2DQ14814 521 aa12.67□□□□□ -0.38
SMARCD3-204ENST00000460431 RANGRFQ9HD47 186 aaPredicted RBP12.67□□□□□ -0.38
SMARCD3-204ENST00000460431 AKIP1Q9NQ31 210 aa12.67□□□□□ -0.38
SMARCD3-204ENST00000460431 FAM223BA6NKX1 122 aa12.66□□□□□ -0.38
SMARCD3-204ENST00000460431 OVOL1O14753 267 aa12.66□□□□□ -0.38
SMARCD3-204ENST00000460431 AKAIN1P0CW23 69 aa12.66□□□□□ -0.38
SMARCD3-204ENST00000460431 AREGP15514 252 aa12.66□□□□□ -0.38
SMARCD3-204ENST00000460431 PI3P19957 117 aa12.66□□□□□ -0.38
SMARCD3-204ENST00000460431 PSMB6P28072 239 aa12.66□□□□□ -0.38
SMARCD3-204ENST00000460431 G6PCP35575 357 aa12.66□□□□□ -0.38
SMARCD3-204ENST00000460431 RHOGP84095 191 aa12.66□□□□□ -0.38
SMARCD3-204ENST00000460431 KLK9Q2XQG4 91 aa12.66□□□□□ -0.38
SMARCD3-204ENST00000460431 SCGB2B2Q4G0G5 96 aa12.66□□□□□ -0.38
SMARCD3-204ENST00000460431 FAM223AQ8IWN6 122 aa12.66□□□□□ -0.38
SMARCD3-204ENST00000460431 NECAP1Q8NC96 275 aa12.66□□□□□ -0.38
SMARCD3-204ENST00000460431 ZFAND1Q8TCF1 268 aa12.66□□□□□ -0.38
SMARCD3-204ENST00000460431 COMMD5Q9GZQ3 224 aa12.66□□□□□ -0.38
SMARCD3-204ENST00000460431 ZMAT5Q9UDW3 170 aaKnown RBP12.66□□□□□ -0.38
SMARCD3-204ENST00000460431 KLK9Q9UKQ9 250 aa12.66□□□□□ -0.38
SMARCD3-204ENST00000460431 ANKRD20A5PA0PJZ0 165 aa12.65□□□□□ -0.38
SMARCD3-204ENST00000460431 ANKRD34BA5PLL1 514 aa12.65□□□□□ -0.38
SMARCD3-204ENST00000460431 DPPA5A6NC42 116 aa12.65□□□□□ -0.38
SMARCD3-204ENST00000460431 CTRB1P17538 263 aa12.65□□□□□ -0.38
SMARCD3-204ENST00000460431 ZP3P21754 424 aa12.65□□□□□ -0.38
SMARCD3-204ENST00000460431 INSL3P51460 131 aa12.65□□□□□ -0.38
SMARCD3-204ENST00000460431 PPP5CP53041 499 aa12.65□□□□□ -0.38
SMARCD3-204ENST00000460431 PIGPP57054 158 aa12.65□□□□□ -0.38
SMARCD3-204ENST00000460431 CTRB2Q6GPI1 263 aa12.65□□□□□ -0.38
SMARCD3-204ENST00000460431 FAAP20Q6NZ36 180 aa12.65□□□□□ -0.38
SMARCD3-204ENST00000460431 MRGPRFQ96AM1 343 aa12.65□□□□□ -0.38
SMARCD3-204ENST00000460431 SEC22AQ96IW7 307 aa12.65□□□□□ -0.38
SMARCD3-204ENST00000460431 SRSF8Q9BRL6 282 aaKnown RBP12.65□□□□□ -0.38
SMARCD3-204ENST00000460431 PEF1Q9UBV8 284 aaKnown RBP12.65□□□□□ -0.38
SMARCD3-204ENST00000460431 TEX50A0A1B0GTY4 177 aa12.64□□□□□ -0.39
SMARCD3-204ENST00000460431 IGLC7A0M8Q6 106 aa12.64□□□□□ -0.39
SMARCD3-204ENST00000460431 DISC1C4P0D8 188 aa12.64□□□□□ -0.39
SMARCD3-204ENST00000460431 SNAPC5O75971 98 aa12.64□□□□□ -0.39
SMARCD3-204ENST00000460431 IGKV1-39P01597 117 aa12.64□□□□□ -0.39
SMARCD3-204ENST00000460431 IGKV1D-39P04432 117 aa12.64□□□□□ -0.39
SMARCD3-204ENST00000460431 ECI1P42126 302 aa12.64□□□□□ -0.39
SMARCD3-204ENST00000460431 ATP5G2Q06055 141 aa12.64□□□□□ -0.39
SMARCD3-204ENST00000460431 C19orf35Q6ZS72 473 aa12.64□□□□□ -0.39
SMARCD3-204ENST00000460431 OR4C16Q8NGL9 310 aa12.64□□□□□ -0.39
SMARCD3-204ENST00000460431 OR13C8Q8NGS7 320 aa12.64□□□□□ -0.39
SMARCD3-204ENST00000460431 MARCH1Q8TCQ1 289 aa12.64□□□□□ -0.39
SMARCD3-204ENST00000460431 FANCD2OSQ96PS1 177 aa12.64□□□□□ -0.39
SMARCD3-204ENST00000460431 QTRT1Q9BXR0 403 aaKnown RBP12.64□□□□□ -0.39
SMARCD3-204ENST00000460431 WI2-2373I1.2A0A1W2PRP0 233 aa12.63□□□□□ -0.39
SMARCD3-204ENST00000460431 H0Y980 276 aa12.63□□□□□ -0.39
SMARCD3-204ENST00000460431 K7EIL1 84 aa12.63□□□□□ -0.39
SMARCD3-204ENST00000460431 OR2J3O76001 311 aa12.63□□□□□ -0.39
SMARCD3-204ENST00000460431 DHFRP00374 187 aa12.63□□□□□ -0.39
SMARCD3-204ENST00000460431 TRBV12-3P01733 135 aa12.63□□□□□ -0.39
SMARCD3-204ENST00000460431 SERPINE2P07093 398 aa12.63□□□□□ -0.39
SMARCD3-204ENST00000460431 CTSDP07339 412 aaPredicted RBP12.63□□□□□ -0.39
SMARCD3-204ENST00000460431 TRAPPC2P0DI81 140 aa12.63□□□□□ -0.39
SMARCD3-204ENST00000460431 TRAPPC2BP0DI82 140 aa12.63□□□□□ -0.39
SMARCD3-204ENST00000460431 S100A5P33763 92 aa12.63□□□□□ -0.39
SMARCD3-204ENST00000460431 KLF5Q13887 457 aaPredicted RBP12.63□□□□□ -0.39
SMARCD3-204ENST00000460431 SURF2Q15527 256 aaPredicted RBP12.63□□□□□ -0.39
SMARCD3-204ENST00000460431 THOC7Q6I9Y2 204 aaKnown RBP12.63□□□□□ -0.39
SMARCD3-204ENST00000460431 ACSM6Q6P461 480 aa12.63□□□□□ -0.39
SMARCD3-204ENST00000460431 ZNF429Q86V71 674 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms