RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 GGTLC1Q9BX51 225 aa5.08□□□□□ -1.6
UBQLN4-202ENST00000459954 DEFB127Q9H1M4 99 aa5.08□□□□□ -1.6
UBQLN4-202ENST00000459954 OPN3Q9H1Y3 402 aaPredicted RBP5.08□□□□□ -1.6
UBQLN4-202ENST00000459954 ELOVL5Q9NYP7 299 aa5.08□□□□□ -1.6
UBQLN4-202ENST00000459954 LSM4Q9Y4Z0 139 aaKnown RBP5.08□□□□□ -1.6
UBQLN4-202ENST00000459954 RP1L1Q8IWN7 2480 aaPredicted RBP5.08□□□□□ -1.6
UBQLN4-202ENST00000459954 PRR14LQ5THK1 2151 aa5.08□□□□□ -1.6
UBQLN4-202ENST00000459954 TRGV10A0A0A0MS01 117 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 A0A1W2PPQ1 181 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 A8MXE2 369 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 PROP1O75360 226 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 CRYABP02511 175 aaKnown RBP5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 IL6RP08887 468 aaPredicted RBP5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 OR10J4P0C629 311 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 OR9G9P0C7N8 305 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 WT1P19544 449 aaPredicted RBP5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 OR10J1P30954 320 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 PRDX2P32119 198 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 THBS3P49746 956 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 ERVFC1-1P60608 527 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 RHOBP62745 196 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 ARG2P78540 354 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 C3AR1Q16581 482 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 Q3ZCU0 254 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 PDZD11Q5EBL8 140 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 C1orf194Q5T5A4 169 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 PRAMEF5Q5TYX0 476 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 PRAMEF6Q5VXH4 476 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 Q6ZR03 302 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 ZNF664Q8N3J9 261 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 ZNF808Q8N4W9 903 aaPredicted RBP5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 CD177Q8N6Q3 437 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 OR10G8Q8NGN5 311 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 OR13A1Q8NGR1 328 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 OR4S2Q8NH73 311 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 MRGPRDQ8TDS7 321 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 ZDHHC16Q969W1 377 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 SARAFQ96BY9 339 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 SLC35E1Q96K37 410 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 UHRF2Q96PU4 802 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 S1PR3Q99500 378 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 QTRT1Q9BXR0 403 aaKnown RBP5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 OR51B6Q9H340 312 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 LINC00574Q9H8X3 128 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 TMEM167BQ9NRX6 74 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 IL36BQ9NZH7 164 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 PSG11Q9UQ72 335 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 FUT9Q9Y231 359 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 FOXA2Q9Y261 457 aaPredicted RBP5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 ZNF257Q9Y2Q1 563 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 TRAPPC1Q9Y5R8 145 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 ZFYVE26Q68DK2 2539 aa5.07□□□□□ -1.6
UBQLN4-202ENST00000459954 IGHV2OR16-5A0A0B4J2B6 119 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 KIR2DL5BA0A0G2JN68 375 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 KIR2DL5BA0A0G2JPC4 375 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 A0A0U1RQK1 487 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 ZNF320A2RRD8 509 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 C15orf61A6NNL5 157 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 INS-IGF2F8WCM5 200 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 M0QZK8 103 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 WNT9BO14905 357 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 ZNHIT1O43257 154 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 RBMXL2O75526 392 aaKnown RBP5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 NDUFB4O95168 129 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 LHBP01229 141 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 IGHV3-13P01766 116 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 MT-ND6P03923 174 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 CECR9P0C854 216 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 GCHFRP30047 84 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 TIMP3P35625 211 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 KIR2DL2P43627 348 aaPredicted RBP5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 GATA4P43694 442 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 CEBPDP49716 269 aaPredicted RBP5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 LOXL3P58215 753 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 HSPE1P61604 102 aaKnown RBP5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 RANP62826 216 aaKnown RBP5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 PRR20EP86478 221 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 PRR20CP86479 221 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 PRR20DP86480 221 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 PRR20BP86481 221 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 PRR20AP86496 221 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 PMP22Q01453 160 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 TLE1Q04724 770 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 Q0VG73 95 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 KRTCAP3Q53RY4 240 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 RNFT1Q5M7Z0 435 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 FAM78BQ5VT40 261 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 CST9LP1Q5W188 147 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 TEX38Q6PEX7 206 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 TEPPQ6URK8 271 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 Q6ZS92 163 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 ZNF826PQ6ZT77 177 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 KIR2DL5AQ8N109 375 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 FDCSPQ8NFU4 85 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 SGMS2Q8NHU3 365 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 UBALD1Q8TB05 177 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 FAM222BQ8WU58 562 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 GATAD1Q8WUU5 269 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 LRRC29Q8WV35 223 aa5.06□□□□□ -1.6
UBQLN4-202ENST00000459954 TMEM37Q8WXS4 190 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms