RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 CTDSPLO15194 276 aa17.91■□□□□ 0.46
CBX3-204ENST00000456948 SNAPC5O75971 98 aa17.91■□□□□ 0.46
CBX3-204ENST00000456948 S1PR2O95136 353 aa17.91■□□□□ 0.46
CBX3-204ENST00000456948 RAB3DO95716 219 aa17.91■□□□□ 0.46
CBX3-204ENST00000456948 ATP5G2Q06055 141 aa17.91■□□□□ 0.46
CBX3-204ENST00000456948 TATDN3Q17R31 274 aa17.91■□□□□ 0.46
CBX3-204ENST00000456948 C10orf55Q5SWW7 151 aa17.91■□□□□ 0.46
CBX3-204ENST00000456948 STEAP1BQ6NZ63 245 aa17.91■□□□□ 0.46
CBX3-204ENST00000456948 CADM3Q8N126 398 aa17.91■□□□□ 0.46
CBX3-204ENST00000456948 ZFAND1Q8TCF1 268 aa17.91■□□□□ 0.46
CBX3-204ENST00000456948 DCUN1D4Q92564 292 aa17.91■□□□□ 0.46
CBX3-204ENST00000456948 SLIRPQ9GZT3 109 aaKnown RBP17.91■□□□□ 0.46
CBX3-204ENST00000456948 MARCH11A6NNE9 402 aa17.9■□□□□ 0.46
CBX3-204ENST00000456948 NPIPB5A8MRT5 1133 aa17.9■□□□□ 0.46
CBX3-204ENST00000456948 CYB5BO43169 146 aa17.9■□□□□ 0.46
CBX3-204ENST00000456948 ZNF735P0CB33 412 aa17.9■□□□□ 0.46
CBX3-204ENST00000456948 ECI1P42126 302 aa17.9■□□□□ 0.46
CBX3-204ENST00000456948 THOC7Q6I9Y2 204 aaKnown RBP17.9■□□□□ 0.46
CBX3-204ENST00000456948 TBC1D26Q86UD7 250 aa17.9■□□□□ 0.46
CBX3-204ENST00000456948 ZNF429Q86V71 674 aa17.9■□□□□ 0.46
CBX3-204ENST00000456948 NECAP1Q8NC96 275 aa17.9■□□□□ 0.46
CBX3-204ENST00000456948 SMIM4Q8WVI0 70 aa17.9■□□□□ 0.46
CBX3-204ENST00000456948 SRSF8Q9BRL6 282 aaKnown RBP17.9■□□□□ 0.46
CBX3-204ENST00000456948 ELOVL1Q9BW60 279 aa17.9■□□□□ 0.46
CBX3-204ENST00000456948 PEF1Q9UBV8 284 aaKnown RBP17.9■□□□□ 0.46
CBX3-204ENST00000456948 FABP12A6NFH5 140 aa17.89■□□□□ 0.45
CBX3-204ENST00000456948 KRASP01116 189 aa17.89■□□□□ 0.45
CBX3-204ENST00000456948 DEFA4P12838 97 aa17.89■□□□□ 0.45
CBX3-204ENST00000456948 RHOGP84095 191 aa17.89■□□□□ 0.45
CBX3-204ENST00000456948 HSD17B13Q7Z5P4 300 aaPredicted RBP17.89■□□□□ 0.45
CBX3-204ENST00000456948 TERB2Q8NHR7 220 aa17.89■□□□□ 0.45
CBX3-204ENST00000456948 TSC22D3Q99576 134 aa17.89■□□□□ 0.45
CBX3-204ENST00000456948 FKBP11Q9NYL4 201 aa17.89■□□□□ 0.45
CBX3-204ENST00000456948 HMX3A6NHT5 357 aa17.88■□□□□ 0.45
CBX3-204ENST00000456948 DISC1C4P0D8 188 aa17.88■□□□□ 0.45
CBX3-204ENST00000456948 CD74P04233 296 aa17.88■□□□□ 0.45
CBX3-204ENST00000456948 SERPINE2P07093 398 aa17.88■□□□□ 0.45
CBX3-204ENST00000456948 IL6RP08887 468 aaPredicted RBP17.88■□□□□ 0.45
CBX3-204ENST00000456948 HIST1H1BP16401 226 aaKnown RBP17.88■□□□□ 0.45
CBX3-204ENST00000456948 S100A5P33763 92 aa17.88■□□□□ 0.45
CBX3-204ENST00000456948 SLURP1P55000 103 aa17.88■□□□□ 0.45
CBX3-204ENST00000456948 SCGB2B2Q4G0G5 96 aa17.88■□□□□ 0.45
CBX3-204ENST00000456948 ZNF343Q6P1L6 599 aa17.88■□□□□ 0.45
CBX3-204ENST00000456948 CCDC71LQ8N9Z2 235 aa17.88■□□□□ 0.45
CBX3-204ENST00000456948 DLX4Q92988 240 aaPredicted RBP17.88■□□□□ 0.45
CBX3-204ENST00000456948 OR4C12Q96R67 309 aa17.88■□□□□ 0.45
CBX3-204ENST00000456948 ANKRD34BA5PLL1 514 aa17.87■□□□□ 0.45
CBX3-204ENST00000456948 TEX22C9J3V5 150 aa17.87■□□□□ 0.45
CBX3-204ENST00000456948 ZNF701M0R085 212 aaPredicted RBP17.87■□□□□ 0.45
CBX3-204ENST00000456948 ATG12O94817 140 aa17.87■□□□□ 0.45
CBX3-204ENST00000456948 AKAIN1P0CW23 69 aa17.87■□□□□ 0.45
CBX3-204ENST00000456948 PSMB6P28072 239 aa17.87■□□□□ 0.45
CBX3-204ENST00000456948 KRTAP10-11P60412 298 aa17.87■□□□□ 0.45
CBX3-204ENST00000456948 QTRT1Q9BXR0 403 aaKnown RBP17.87■□□□□ 0.45
CBX3-204ENST00000456948 COPZ2Q9P299 210 aa17.87■□□□□ 0.45
CBX3-204ENST00000456948 TRBV9A0A0B4J1U6 114 aa17.86■□□□□ 0.45
CBX3-204ENST00000456948 CRYGCP07315 174 aa17.86■□□□□ 0.45
CBX3-204ENST00000456948 RPA2P15927 270 aa17.86■□□□□ 0.45
CBX3-204ENST00000456948 TNFSF8P32971 234 aa17.86■□□□□ 0.45
CBX3-204ENST00000456948 RND3P61587 244 aa17.86■□□□□ 0.45
CBX3-204ENST00000456948 DEFB121Q5J5C9 76 aa17.86■□□□□ 0.45
CBX3-204ENST00000456948 LHFPL1Q86WI0 220 aa17.86■□□□□ 0.45
CBX3-204ENST00000456948 OR1L8Q8NGR8 309 aa17.86■□□□□ 0.45
CBX3-204ENST00000456948 NXF2Q9GZY0 626 aaKnown RBP17.86■□□□□ 0.45
CBX3-204ENST00000456948 AKIP1Q9NQ31 210 aa17.86■□□□□ 0.45
CBX3-204ENST00000456948 THYN1Q9P016 225 aa17.86■□□□□ 0.45
CBX3-204ENST00000456948 PRNDQ9UKY0 176 aa17.86■□□□□ 0.45
CBX3-204ENST00000456948 SAP30O75446 220 aa17.85■□□□□ 0.45
CBX3-204ENST00000456948 TRAPPC2P0DI81 140 aa17.85■□□□□ 0.45
CBX3-204ENST00000456948 TRAPPC2BP0DI82 140 aa17.85■□□□□ 0.45
CBX3-204ENST00000456948 G6PCP35575 357 aa17.85■□□□□ 0.45
CBX3-204ENST00000456948 PIGPP57054 158 aa17.85■□□□□ 0.45
CBX3-204ENST00000456948 OR2B8PP59922 312 aa17.85■□□□□ 0.45
CBX3-204ENST00000456948 ZNF585BQ52M93 769 aa17.85■□□□□ 0.45
CBX3-204ENST00000456948 C14orf166Q9Y224 244 aaKnown RBP17.85■□□□□ 0.45
CBX3-204ENST00000456948 GSTZ1O43708 216 aaPredicted RBP17.84■□□□□ 0.45
CBX3-204ENST00000456948 B3GALNT1O75752 331 aa17.84■□□□□ 0.45
CBX3-204ENST00000456948 OR2J3O76001 311 aa17.84■□□□□ 0.45
CBX3-204ENST00000456948 PRH1P02810 166 aa17.84■□□□□ 0.45
CBX3-204ENST00000456948 PTBP1P26599 531 aaKnown RBP eCLIP17.84■□□□□ 0.45
CBX3-204ENST00000456948 EXOSC2Q13868 293 aaKnown RBP17.84■□□□□ 0.45
CBX3-204ENST00000456948 RPEL1Q2QD12 228 aa17.84■□□□□ 0.45
CBX3-204ENST00000456948 C15orf32Q32M92 178 aa17.84■□□□□ 0.45
CBX3-204ENST00000456948 H2BFWTQ7Z2G1 175 aa17.84■□□□□ 0.45
CBX3-204ENST00000456948 PRRT1Q99946 306 aa17.84■□□□□ 0.45
CBX3-204ENST00000456948 FBXL7Q9UJT9 491 aa17.84■□□□□ 0.45
CBX3-204ENST00000456948 TRAV3A0A0B4J244 114 aa17.83■□□□□ 0.44
CBX3-204ENST00000456948 E7EUB6 86 aa17.83■□□□□ 0.44
CBX3-204ENST00000456948 CTRB1P17538 263 aa17.83■□□□□ 0.44
CBX3-204ENST00000456948 PPP5CP53041 499 aa17.83■□□□□ 0.44
CBX3-204ENST00000456948 CTRB2Q6GPI1 263 aa17.83■□□□□ 0.44
CBX3-204ENST00000456948 ACSM6Q6P461 480 aa17.83■□□□□ 0.44
CBX3-204ENST00000456948 OR6Q1Q8NGQ2 317 aa17.83■□□□□ 0.44
CBX3-204ENST00000456948 OR4A16Q8NH70 328 aa17.83■□□□□ 0.44
CBX3-204ENST00000456948 TMEM56Q96MV1 263 aa17.83■□□□□ 0.44
CBX3-204ENST00000456948 SCGB3A2Q96PL1 93 aa17.83■□□□□ 0.44
CBX3-204ENST00000456948 OR51B2Q9Y5P1 312 aa17.83■□□□□ 0.44
CBX3-204ENST00000456948 H0Y980 276 aa17.82■□□□□ 0.44
CBX3-204ENST00000456948 AREGP15514 252 aa17.82■□□□□ 0.44
CBX3-204ENST00000456948 ZNF45Q02386 682 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms