RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 ZP3P21754 424 aa13.96□□□□□ -0.17
PDLIM2-215ENST00000456545 KRTAP10-11P60412 298 aa13.96□□□□□ -0.17
PDLIM2-215ENST00000456545 RHOGP84095 191 aa13.96□□□□□ -0.17
PDLIM2-215ENST00000456545 DEFA5Q01523 94 aa13.96□□□□□ -0.17
PDLIM2-215ENST00000456545 EGFEM1PQ0D2K5 195 aa13.96□□□□□ -0.17
PDLIM2-215ENST00000456545 POU2AF1Q16633 256 aa13.96□□□□□ -0.17
PDLIM2-215ENST00000456545 STEAP1BQ6NZ63 245 aa13.96□□□□□ -0.17
PDLIM2-215ENST00000456545 SLC2A9Q9NRM0 540 aa13.96□□□□□ -0.17
PDLIM2-215ENST00000456545 RSL24D1Q9UHA3 163 aaKnown RBP13.96□□□□□ -0.17
PDLIM2-215ENST00000456545 ZNF257Q9Y2Q1 563 aa13.96□□□□□ -0.17
PDLIM2-215ENST00000456545 TNCP24821 2201 aa13.95□□□□□ -0.18
PDLIM2-215ENST00000456545 FAM223BA6NKX1 122 aa13.95□□□□□ -0.18
PDLIM2-215ENST00000456545 MARCH11A6NNE9 402 aa13.95□□□□□ -0.18
PDLIM2-215ENST00000456545 IL6RP08887 468 aaPredicted RBP13.95□□□□□ -0.18
PDLIM2-215ENST00000456545 ZNF735P0CB33 412 aa13.95□□□□□ -0.18
PDLIM2-215ENST00000456545 ECI1P42126 302 aa13.95□□□□□ -0.18
PDLIM2-215ENST00000456545 INSL3P51460 131 aa13.95□□□□□ -0.18
PDLIM2-215ENST00000456545 FAM223AQ8IWN6 122 aa13.95□□□□□ -0.18
PDLIM2-215ENST00000456545 ZFAND1Q8TCF1 268 aa13.95□□□□□ -0.18
PDLIM2-215ENST00000456545 SLIRPQ9GZT3 109 aaKnown RBP13.95□□□□□ -0.18
PDLIM2-215ENST00000456545 PEF1Q9UBV8 284 aaKnown RBP13.95□□□□□ -0.18
PDLIM2-215ENST00000456545 TRAV3A0A0B4J244 114 aa13.94□□□□□ -0.18
PDLIM2-215ENST00000456545 DISC1C4P0D8 188 aa13.94□□□□□ -0.18
PDLIM2-215ENST00000456545 TEX22C9J3V5 150 aa13.94□□□□□ -0.18
PDLIM2-215ENST00000456545 E7EUB6 86 aa13.94□□□□□ -0.18
PDLIM2-215ENST00000456545 CTDSPLO15194 276 aa13.94□□□□□ -0.18
PDLIM2-215ENST00000456545 SAP30O75446 220 aa13.94□□□□□ -0.18
PDLIM2-215ENST00000456545 OR2J3O76001 311 aa13.94□□□□□ -0.18
PDLIM2-215ENST00000456545 SERPINE2P07093 398 aa13.94□□□□□ -0.18
PDLIM2-215ENST00000456545 MYOD1P15172 320 aa13.94□□□□□ -0.18
PDLIM2-215ENST00000456545 TNFSF8P32971 234 aa13.94□□□□□ -0.18
PDLIM2-215ENST00000456545 S100A5P33763 92 aa13.94□□□□□ -0.18
PDLIM2-215ENST00000456545 G6PCP35575 357 aa13.94□□□□□ -0.18
PDLIM2-215ENST00000456545 PPP5CP53041 499 aa13.94□□□□□ -0.18
PDLIM2-215ENST00000456545 MEF2DQ14814 521 aa13.94□□□□□ -0.18
PDLIM2-215ENST00000456545 TATDN3Q17R31 274 aa13.94□□□□□ -0.18
PDLIM2-215ENST00000456545 NECAP1Q8NC96 275 aa13.94□□□□□ -0.18
PDLIM2-215ENST00000456545 TERB2Q8NHR7 220 aa13.94□□□□□ -0.18
PDLIM2-215ENST00000456545 SMIM4Q8WVI0 70 aa13.94□□□□□ -0.18
PDLIM2-215ENST00000456545 ZNF486Q96H40 463 aaPredicted RBP13.94□□□□□ -0.18
PDLIM2-215ENST00000456545 OR4C12Q96R67 309 aa13.94□□□□□ -0.18
PDLIM2-215ENST00000456545 ELOVL1Q9BW60 279 aa13.94□□□□□ -0.18
PDLIM2-215ENST00000456545 AKIP1Q9NQ31 210 aa13.94□□□□□ -0.18
PDLIM2-215ENST00000456545 NPIPB5A8MRT5 1133 aa13.93□□□□□ -0.18
PDLIM2-215ENST00000456545 CD74P04233 296 aa13.93□□□□□ -0.18
PDLIM2-215ENST00000456545 PI3P19957 117 aa13.93□□□□□ -0.18
PDLIM2-215ENST00000456545 PSMB6P28072 239 aa13.93□□□□□ -0.18
PDLIM2-215ENST00000456545 ZNF585BQ52M93 769 aa13.93□□□□□ -0.18
PDLIM2-215ENST00000456545 ZNF343Q6P1L6 599 aa13.93□□□□□ -0.18
PDLIM2-215ENST00000456545 ZNF429Q86V71 674 aa13.93□□□□□ -0.18
PDLIM2-215ENST00000456545 OR4D10Q8NGI6 311 aa13.93□□□□□ -0.18
PDLIM2-215ENST00000456545 HINT2Q9BX68 163 aa13.93□□□□□ -0.18
PDLIM2-215ENST00000456545 FAM212BQ9NTI7 297 aaPredicted RBP13.93□□□□□ -0.18
PDLIM2-215ENST00000456545 COPZ2Q9P299 210 aa13.93□□□□□ -0.18
PDLIM2-215ENST00000456545 FBXL7Q9UJT9 491 aa13.93□□□□□ -0.18
PDLIM2-215ENST00000456545 WI2-2373I1.2A0A1W2PRP0 233 aa13.92□□□□□ -0.18
PDLIM2-215ENST00000456545 LY86O95711 162 aa13.92□□□□□ -0.18
PDLIM2-215ENST00000456545 REG1AP05451 166 aa13.92□□□□□ -0.18
PDLIM2-215ENST00000456545 AKAIN1P0CW23 69 aa13.92□□□□□ -0.18
PDLIM2-215ENST00000456545 TRAPPC2P0DI81 140 aa13.92□□□□□ -0.18
PDLIM2-215ENST00000456545 TRAPPC2BP0DI82 140 aa13.92□□□□□ -0.18
PDLIM2-215ENST00000456545 AREGP15514 252 aa13.92□□□□□ -0.18
PDLIM2-215ENST00000456545 HIST1H1BP16401 226 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-215ENST00000456545 PIGPP57054 158 aa13.92□□□□□ -0.18
PDLIM2-215ENST00000456545 OR2B8PP59922 312 aa13.92□□□□□ -0.18
PDLIM2-215ENST00000456545 EXOSC2Q13868 293 aaKnown RBP13.92□□□□□ -0.18
PDLIM2-215ENST00000456545 H2BFWTQ7Z2G1 175 aa13.92□□□□□ -0.18
PDLIM2-215ENST00000456545 LHFPL1Q86WI0 220 aa13.92□□□□□ -0.18
PDLIM2-215ENST00000456545 CCDC71LQ8N9Z2 235 aa13.92□□□□□ -0.18
PDLIM2-215ENST00000456545 OR1L8Q8NGR8 309 aa13.92□□□□□ -0.18
PDLIM2-215ENST00000456545 TSC22D3Q99576 134 aa13.92□□□□□ -0.18
PDLIM2-215ENST00000456545 FKBP11Q9NYL4 201 aa13.92□□□□□ -0.18
PDLIM2-215ENST00000456545 TRBV9A0A0B4J1U6 114 aa13.91□□□□□ -0.18
PDLIM2-215ENST00000456545 CYB5BO43169 146 aa13.91□□□□□ -0.18
PDLIM2-215ENST00000456545 ZNF45Q02386 682 aa13.91□□□□□ -0.18
PDLIM2-215ENST00000456545 RPEL1Q2QD12 228 aa13.91□□□□□ -0.18
PDLIM2-215ENST00000456545 C15orf32Q32M92 178 aa13.91□□□□□ -0.18
PDLIM2-215ENST00000456545 OR4A16Q8NH70 328 aa13.91□□□□□ -0.18
PDLIM2-215ENST00000456545 QTRT1Q9BXR0 403 aaKnown RBP13.91□□□□□ -0.18
PDLIM2-215ENST00000456545 NXF2Q9GZY0 626 aaKnown RBP13.91□□□□□ -0.18
PDLIM2-215ENST00000456545 PRNDQ9UKY0 176 aa13.91□□□□□ -0.18
PDLIM2-215ENST00000456545 C14orf166Q9Y224 244 aaKnown RBP13.91□□□□□ -0.18
PDLIM2-215ENST00000456545 NSG2Q9Y328 171 aa13.91□□□□□ -0.18
PDLIM2-215ENST00000456545 OR51B2Q9Y5P1 312 aa13.91□□□□□ -0.18
PDLIM2-215ENST00000456545 TEX50A0A1B0GTY4 177 aa13.9□□□□□ -0.18
PDLIM2-215ENST00000456545 K7EIL1 84 aa13.9□□□□□ -0.18
PDLIM2-215ENST00000456545 RBMXL2O75526 392 aaKnown RBP13.9□□□□□ -0.18
PDLIM2-215ENST00000456545 CRYGCP07315 174 aa13.9□□□□□ -0.18
PDLIM2-215ENST00000456545 FGF2P09038 288 aa13.9□□□□□ -0.18
PDLIM2-215ENST00000456545 MECP2P51608 486 aaKnown RBP13.9□□□□□ -0.18
PDLIM2-215ENST00000456545 RND3P61587 244 aa13.9□□□□□ -0.18
PDLIM2-215ENST00000456545 DCTN2Q13561 401 aaKnown RBP13.9□□□□□ -0.18
PDLIM2-215ENST00000456545 PYDC2Q56P42 97 aa13.9□□□□□ -0.18
PDLIM2-215ENST00000456545 FAM209BQ5JX69 171 aa13.9□□□□□ -0.18
PDLIM2-215ENST00000456545 THOC7Q6I9Y2 204 aaKnown RBP13.9□□□□□ -0.18
PDLIM2-215ENST00000456545 FAAP20Q6NZ36 180 aa13.9□□□□□ -0.18
PDLIM2-215ENST00000456545 ACSM6Q6P461 480 aa13.9□□□□□ -0.18
PDLIM2-215ENST00000456545 MARCH1Q8TCQ1 289 aa13.9□□□□□ -0.18
PDLIM2-215ENST00000456545 SRSF8Q9BRL6 282 aaKnown RBP13.9□□□□□ -0.18
PDLIM2-215ENST00000456545 C3orf85A0A1B0GTC6 90 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms