RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 TNFSF8P32971 234 aa13.38□□□□□ -0.27
USP39-208ENST00000455732 ERVK-16P61578 105 aa13.38□□□□□ -0.27
USP39-208ENST00000455732 RND3P61587 244 aa13.38□□□□□ -0.27
USP39-208ENST00000455732 ZNF585BQ52M93 769 aa13.38□□□□□ -0.27
USP39-208ENST00000455732 HRASLSQ9HDD0 168 aa13.38□□□□□ -0.27
USP39-208ENST00000455732 SLC2A9Q9NRM0 540 aa13.38□□□□□ -0.27
USP39-208ENST00000455732 ZNF257Q9Y2Q1 563 aa13.38□□□□□ -0.27
USP39-208ENST00000455732 IGHV4OR15-8A0A075B7B6 117 aa13.37□□□□□ -0.27
USP39-208ENST00000455732 A0A087WW49 117 aa13.37□□□□□ -0.27
USP39-208ENST00000455732 TRBV9A0A0B4J1U6 114 aa13.37□□□□□ -0.27
USP39-208ENST00000455732 WI2-2373I1.2A0A1W2PRP0 233 aa13.37□□□□□ -0.27
USP39-208ENST00000455732 E7EUB6 86 aa13.37□□□□□ -0.27
USP39-208ENST00000455732 HSPB1P04792 205 aaKnown RBP13.37□□□□□ -0.27
USP39-208ENST00000455732 PTBP1P26599 531 aaKnown RBP eCLIP13.37□□□□□ -0.27
USP39-208ENST00000455732 LPAR6P43657 344 aa13.37□□□□□ -0.27
USP39-208ENST00000455732 MEF2DQ14814 521 aa13.37□□□□□ -0.27
USP39-208ENST00000455732 TBC1D26Q86UD7 250 aa13.37□□□□□ -0.27
USP39-208ENST00000455732 DMBX1Q8NFW5 382 aa13.37□□□□□ -0.27
USP39-208ENST00000455732 TERB2Q8NHR7 220 aa13.37□□□□□ -0.27
USP39-208ENST00000455732 SORL1Q92673 2214 aa13.37□□□□□ -0.27
USP39-208ENST00000455732 FABP12A6NFH5 140 aa13.36□□□□□ -0.27
USP39-208ENST00000455732 HMX3A6NHT5 357 aa13.36□□□□□ -0.27
USP39-208ENST00000455732 FAM223BA6NKX1 122 aa13.36□□□□□ -0.27
USP39-208ENST00000455732 RBMXL2O75526 392 aaKnown RBP13.36□□□□□ -0.27
USP39-208ENST00000455732 CRYGCP07315 174 aa13.36□□□□□ -0.27
USP39-208ENST00000455732 OR2B8PP59922 312 aa13.36□□□□□ -0.27
USP39-208ENST00000455732 ZNF45Q02386 682 aa13.36□□□□□ -0.27
USP39-208ENST00000455732 KLK9Q2XQG4 91 aa13.36□□□□□ -0.27
USP39-208ENST00000455732 C9orf66Q5T8R8 295 aa13.36□□□□□ -0.27
USP39-208ENST00000455732 ZNF343Q6P1L6 599 aa13.36□□□□□ -0.27
USP39-208ENST00000455732 FAM223AQ8IWN6 122 aa13.36□□□□□ -0.27
USP39-208ENST00000455732 SRSF8Q9BRL6 282 aaKnown RBP13.36□□□□□ -0.27
USP39-208ENST00000455732 ZMAT5Q9UDW3 170 aaKnown RBP13.36□□□□□ -0.27
USP39-208ENST00000455732 KLK9Q9UKQ9 250 aa13.36□□□□□ -0.27
USP39-208ENST00000455732 TRAV3A0A0B4J244 114 aa13.35□□□□□ -0.27
USP39-208ENST00000455732 CGB1A6NKQ9 187 aa13.35□□□□□ -0.27
USP39-208ENST00000455732 SEC14L6B5MCN3 397 aa13.35□□□□□ -0.27
USP39-208ENST00000455732 AKAIN1P0CW23 69 aa13.35□□□□□ -0.27
USP39-208ENST00000455732 PGAM2P15259 253 aa13.35□□□□□ -0.27
USP39-208ENST00000455732 ECI1P42126 302 aa13.35□□□□□ -0.27
USP39-208ENST00000455732 RHOGP84095 191 aa13.35□□□□□ -0.27
USP39-208ENST00000455732 THOC7Q6I9Y2 204 aaKnown RBP13.35□□□□□ -0.27
USP39-208ENST00000455732 DCUN1D4Q92564 292 aa13.35□□□□□ -0.27
USP39-208ENST00000455732 FYTTD1Q96QD9 318 aaKnown RBP13.35□□□□□ -0.27
USP39-208ENST00000455732 RANGRFQ9HD47 186 aaPredicted RBP13.35□□□□□ -0.27
USP39-208ENST00000455732 ANKRD20A5PA0PJZ0 165 aa13.34□□□□□ -0.27
USP39-208ENST00000455732 OVOL1O14753 267 aa13.34□□□□□ -0.27
USP39-208ENST00000455732 KRASP01116 189 aa13.34□□□□□ -0.27
USP39-208ENST00000455732 MYOD1P15172 320 aa13.34□□□□□ -0.27
USP39-208ENST00000455732 CTRB1P17538 263 aa13.34□□□□□ -0.27
USP39-208ENST00000455732 PSMB6P28072 239 aa13.34□□□□□ -0.27
USP39-208ENST00000455732 INSL3P51460 131 aa13.34□□□□□ -0.27
USP39-208ENST00000455732 PPP5CP53041 499 aa13.34□□□□□ -0.27
USP39-208ENST00000455732 SLURP1P55000 103 aa13.34□□□□□ -0.27
USP39-208ENST00000455732 CTRB2Q6GPI1 263 aa13.34□□□□□ -0.27
USP39-208ENST00000455732 NECAP1Q8NC96 275 aa13.34□□□□□ -0.27
USP39-208ENST00000455732 ZFAND1Q8TCF1 268 aa13.34□□□□□ -0.27
USP39-208ENST00000455732 DLX4Q92988 240 aaPredicted RBP13.34□□□□□ -0.27
USP39-208ENST00000455732 MRGPRFQ96AM1 343 aa13.34□□□□□ -0.27
USP39-208ENST00000455732 COMMD5Q9GZQ3 224 aa13.34□□□□□ -0.27
USP39-208ENST00000455732 AKIP1Q9NQ31 210 aa13.34□□□□□ -0.27
USP39-208ENST00000455732 IGLC7A0M8Q6 106 aa13.33□□□□□ -0.28
USP39-208ENST00000455732 DPPA5A6NC42 116 aa13.33□□□□□ -0.28
USP39-208ENST00000455732 DISC1C4P0D8 188 aa13.33□□□□□ -0.28
USP39-208ENST00000455732 H0Y980 276 aa13.33□□□□□ -0.28
USP39-208ENST00000455732 DHFRP00374 187 aa13.33□□□□□ -0.28
USP39-208ENST00000455732 PRH1P02810 166 aa13.33□□□□□ -0.28
USP39-208ENST00000455732 AREGP15514 252 aa13.33□□□□□ -0.28
USP39-208ENST00000455732 RPA2P15927 270 aa13.33□□□□□ -0.28
USP39-208ENST00000455732 ZP3P21754 424 aa13.33□□□□□ -0.28
USP39-208ENST00000455732 G6PCP35575 357 aa13.33□□□□□ -0.28
USP39-208ENST00000455732 PIGPP57054 158 aa13.33□□□□□ -0.28
USP39-208ENST00000455732 DEFA5Q01523 94 aa13.33□□□□□ -0.28
USP39-208ENST00000455732 SURF2Q15527 256 aaPredicted RBP13.33□□□□□ -0.28
USP39-208ENST00000455732 SCGB2B2Q4G0G5 96 aa13.33□□□□□ -0.28
USP39-208ENST00000455732 FAAP20Q6NZ36 180 aa13.33□□□□□ -0.28
USP39-208ENST00000455732 OR4C16Q8NGL9 310 aa13.33□□□□□ -0.28
USP39-208ENST00000455732 OR13C8Q8NGS7 320 aa13.33□□□□□ -0.28
USP39-208ENST00000455732 TSC22D3Q99576 134 aa13.33□□□□□ -0.28
USP39-208ENST00000455732 QTRT1Q9BXR0 403 aaKnown RBP13.33□□□□□ -0.28
USP39-208ENST00000455732 SLC2A8Q9NY64 477 aa13.33□□□□□ -0.28
USP39-208ENST00000455732 V9GYH0 126 aa13.33□□□□□ -0.28
USP39-208ENST00000455732 IGKV1-39P01597 117 aa13.32□□□□□ -0.28
USP39-208ENST00000455732 IGKV1D-39P04432 117 aa13.32□□□□□ -0.28
USP39-208ENST00000455732 CTSDP07339 412 aaPredicted RBP13.32□□□□□ -0.28
USP39-208ENST00000455732 PI3P19957 117 aa13.32□□□□□ -0.28
USP39-208ENST00000455732 S100A5P33763 92 aa13.32□□□□□ -0.28
USP39-208ENST00000455732 FAM209BQ5JX69 171 aa13.32□□□□□ -0.28
USP39-208ENST00000455732 HSD17B13Q7Z5P4 300 aaPredicted RBP13.32□□□□□ -0.28
USP39-208ENST00000455732 CCDC71LQ8N9Z2 235 aa13.32□□□□□ -0.28
USP39-208ENST00000455732 SEC22AQ96IW7 307 aa13.32□□□□□ -0.28
USP39-208ENST00000455732 FANCD2OSQ96PS1 177 aa13.32□□□□□ -0.28
USP39-208ENST00000455732 PRRT1Q99946 306 aa13.32□□□□□ -0.28
USP39-208ENST00000455732 PEF1Q9UBV8 284 aaKnown RBP13.32□□□□□ -0.28
USP39-208ENST00000455732 PRNDQ9UKY0 176 aa13.32□□□□□ -0.28
USP39-208ENST00000455732 B3GALNT1O75752 331 aa13.31□□□□□ -0.28
USP39-208ENST00000455732 SNAPC5O75971 98 aa13.31□□□□□ -0.28
USP39-208ENST00000455732 SERPINE2P07093 398 aa13.31□□□□□ -0.28
USP39-208ENST00000455732 HIST1H1BP16401 226 aaKnown RBP13.31□□□□□ -0.28
USP39-208ENST00000455732 ATP5G2Q06055 141 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms