RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 DCUN1D4Q92564 292 aa12.55□□□□□ -0.4
SMPD4-214ENST00000455548 ZNF486Q96H40 463 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-214ENST00000455548 FYTTD1Q96QD9 318 aaKnown RBP12.55□□□□□ -0.4
SMPD4-214ENST00000455548 NXF2Q9GZY0 626 aaKnown RBP12.55□□□□□ -0.4
SMPD4-214ENST00000455548 RANGRFQ9HD47 186 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-214ENST00000455548 SLC2A9Q9NRM0 540 aa12.55□□□□□ -0.4
SMPD4-214ENST00000455548 TMEM140Q9NV12 185 aa12.55□□□□□ -0.4
SMPD4-214ENST00000455548 RSL24D1Q9UHA3 163 aaKnown RBP12.55□□□□□ -0.4
SMPD4-214ENST00000455548 ZNF257Q9Y2Q1 563 aa12.55□□□□□ -0.4
SMPD4-214ENST00000455548 TRBV9A0A0B4J1U6 114 aa12.54□□□□□ -0.4
SMPD4-214ENST00000455548 NPIPB5A8MRT5 1133 aa12.54□□□□□ -0.4
SMPD4-214ENST00000455548 ZP3P21754 424 aa12.54□□□□□ -0.4
SMPD4-214ENST00000455548 INSL3P51460 131 aa12.54□□□□□ -0.4
SMPD4-214ENST00000455548 SLURP1P55000 103 aa12.54□□□□□ -0.4
SMPD4-214ENST00000455548 KRTAP10-11P60412 298 aa12.54□□□□□ -0.4
SMPD4-214ENST00000455548 RHOGP84095 191 aa12.54□□□□□ -0.4
SMPD4-214ENST00000455548 MEF2DQ14814 521 aa12.54□□□□□ -0.4
SMPD4-214ENST00000455548 ZNF585BQ52M93 769 aa12.54□□□□□ -0.4
SMPD4-214ENST00000455548 TBC1D26Q86UD7 250 aa12.54□□□□□ -0.4
SMPD4-214ENST00000455548 LHFPL1Q86WI0 220 aa12.54□□□□□ -0.4
SMPD4-214ENST00000455548 MRAPQ8TCY5 172 aa12.54□□□□□ -0.4
SMPD4-214ENST00000455548 COMMD5Q9GZQ3 224 aa12.54□□□□□ -0.4
SMPD4-214ENST00000455548 ZNF701M0R085 212 aaPredicted RBP12.53□□□□□ -0.4
SMPD4-214ENST00000455548 DHFRP00374 187 aa12.53□□□□□ -0.4
SMPD4-214ENST00000455548 TNFSF8P32971 234 aa12.53□□□□□ -0.4
SMPD4-214ENST00000455548 RND3P61587 244 aa12.53□□□□□ -0.4
SMPD4-214ENST00000455548 ZNF343Q6P1L6 599 aa12.53□□□□□ -0.4
SMPD4-214ENST00000455548 NECAP1Q8NC96 275 aa12.53□□□□□ -0.4
SMPD4-214ENST00000455548 TERB2Q8NHR7 220 aa12.53□□□□□ -0.4
SMPD4-214ENST00000455548 ZFAND1Q8TCF1 268 aa12.53□□□□□ -0.4
SMPD4-214ENST00000455548 DLX4Q92988 240 aaPredicted RBP12.53□□□□□ -0.4
SMPD4-214ENST00000455548 RBM38Q9H0Z9 239 aaKnown RBP12.53□□□□□ -0.4
SMPD4-214ENST00000455548 AKIP1Q9NQ31 210 aa12.53□□□□□ -0.4
SMPD4-214ENST00000455548 TRAV3A0A0B4J244 114 aa12.52□□□□□ -0.41
SMPD4-214ENST00000455548 A0A1B0GW64 132 aa12.52□□□□□ -0.41
SMPD4-214ENST00000455548 ANKRD34BA5PLL1 514 aa12.52□□□□□ -0.41
SMPD4-214ENST00000455548 E7EUB6 86 aa12.52□□□□□ -0.41
SMPD4-214ENST00000455548 GSTZ1O43708 216 aaPredicted RBP12.52□□□□□ -0.41
SMPD4-214ENST00000455548 SNAPC5O75971 98 aa12.52□□□□□ -0.41
SMPD4-214ENST00000455548 KRASP01116 189 aa12.52□□□□□ -0.41
SMPD4-214ENST00000455548 RPA2P15927 270 aa12.52□□□□□ -0.41
SMPD4-214ENST00000455548 PTBP1P26599 531 aaKnown RBP eCLIP12.52□□□□□ -0.41
SMPD4-214ENST00000455548 OR2B8PP59922 312 aa12.52□□□□□ -0.41
SMPD4-214ENST00000455548 ATP5G2Q06055 141 aa12.52□□□□□ -0.41
SMPD4-214ENST00000455548 FAM209BQ5JX69 171 aa12.52□□□□□ -0.41
SMPD4-214ENST00000455548 THOC7Q6I9Y2 204 aaKnown RBP12.52□□□□□ -0.41
SMPD4-214ENST00000455548 ZNF429Q86V71 674 aa12.52□□□□□ -0.41
SMPD4-214ENST00000455548 OR4D10Q8NGI6 311 aa12.52□□□□□ -0.41
SMPD4-214ENST00000455548 SRSF8Q9BRL6 282 aaKnown RBP12.52□□□□□ -0.41
SMPD4-214ENST00000455548 PEF1Q9UBV8 284 aaKnown RBP12.52□□□□□ -0.41
SMPD4-214ENST00000455548 FABP12A6NFH5 140 aa12.51□□□□□ -0.41
SMPD4-214ENST00000455548 DISC1C4P0D8 188 aa12.51□□□□□ -0.41
SMPD4-214ENST00000455548 RBMXL2O75526 392 aaKnown RBP12.51□□□□□ -0.41
SMPD4-214ENST00000455548 PRH1P02810 166 aa12.51□□□□□ -0.41
SMPD4-214ENST00000455548 CRYGCP07315 174 aa12.51□□□□□ -0.41
SMPD4-214ENST00000455548 AKAIN1P0CW23 69 aa12.51□□□□□ -0.41
SMPD4-214ENST00000455548 MYOD1P15172 320 aa12.51□□□□□ -0.41
SMPD4-214ENST00000455548 AREGP15514 252 aa12.51□□□□□ -0.41
SMPD4-214ENST00000455548 HIST1H1BP16401 226 aaKnown RBP12.51□□□□□ -0.41
SMPD4-214ENST00000455548 PSMB6P28072 239 aa12.51□□□□□ -0.41
SMPD4-214ENST00000455548 G6PCP35575 357 aa12.51□□□□□ -0.41
SMPD4-214ENST00000455548 ECI1P42126 302 aa12.51□□□□□ -0.41
SMPD4-214ENST00000455548 PPP5CP53041 499 aa12.51□□□□□ -0.41
SMPD4-214ENST00000455548 DEFA5Q01523 94 aa12.51□□□□□ -0.41
SMPD4-214ENST00000455548 ZNF45Q02386 682 aa12.51□□□□□ -0.41
SMPD4-214ENST00000455548 EXOSC2Q13868 293 aaKnown RBP12.51□□□□□ -0.41
SMPD4-214ENST00000455548 SCGB2B2Q4G0G5 96 aa12.51□□□□□ -0.41
SMPD4-214ENST00000455548 TSC22D3Q99576 134 aa12.51□□□□□ -0.41
SMPD4-214ENST00000455548 SOSTQ9BQB4 213 aa12.51□□□□□ -0.41
SMPD4-214ENST00000455548 QTRT1Q9BXR0 403 aaKnown RBP12.51□□□□□ -0.41
SMPD4-214ENST00000455548 SORL1Q92673 2214 aa12.51□□□□□ -0.41
SMPD4-214ENST00000455548 WI2-2373I1.2A0A1W2PRP0 233 aa12.5□□□□□ -0.41
SMPD4-214ENST00000455548 CGB1A6NKQ9 187 aa12.5□□□□□ -0.41
SMPD4-214ENST00000455548 K7EIL1 84 aa12.5□□□□□ -0.41
SMPD4-214ENST00000455548 SERPINE2P07093 398 aa12.5□□□□□ -0.41
SMPD4-214ENST00000455548 CTRB1P17538 263 aa12.5□□□□□ -0.41
SMPD4-214ENST00000455548 S100A5P33763 92 aa12.5□□□□□ -0.41
SMPD4-214ENST00000455548 PIGPP57054 158 aa12.5□□□□□ -0.41
SMPD4-214ENST00000455548 CTRB2Q6GPI1 263 aa12.5□□□□□ -0.41
SMPD4-214ENST00000455548 ACSM6Q6P461 480 aa12.5□□□□□ -0.41
SMPD4-214ENST00000455548 HSD17B13Q7Z5P4 300 aaPredicted RBP12.5□□□□□ -0.41
SMPD4-214ENST00000455548 CCDC71LQ8N9Z2 235 aa12.5□□□□□ -0.41
SMPD4-214ENST00000455548 OR1L8Q8NGR8 309 aa12.5□□□□□ -0.41
SMPD4-214ENST00000455548 ELOVL1Q9BW60 279 aa12.5□□□□□ -0.41
SMPD4-214ENST00000455548 FKBP11Q9NYL4 201 aa12.5□□□□□ -0.41
SMPD4-214ENST00000455548 COPZ2Q9P299 210 aa12.5□□□□□ -0.41
SMPD4-214ENST00000455548 PRNDQ9UKY0 176 aa12.5□□□□□ -0.41
SMPD4-214ENST00000455548 IGLC7A0M8Q6 106 aa12.49□□□□□ -0.41
SMPD4-214ENST00000455548 ANKRD20A5PA0PJZ0 165 aa12.49□□□□□ -0.41
SMPD4-214ENST00000455548 H0Y980 276 aa12.49□□□□□ -0.41
SMPD4-214ENST00000455548 SAP30O75446 220 aa12.49□□□□□ -0.41
SMPD4-214ENST00000455548 OR2J3O76001 311 aa12.49□□□□□ -0.41
SMPD4-214ENST00000455548 TRAPPC2P0DI81 140 aa12.49□□□□□ -0.41
SMPD4-214ENST00000455548 TRAPPC2BP0DI82 140 aa12.49□□□□□ -0.41
SMPD4-214ENST00000455548 DEFA4P12838 97 aa12.49□□□□□ -0.41
SMPD4-214ENST00000455548 PI3P19957 117 aa12.49□□□□□ -0.41
SMPD4-214ENST00000455548 DCTN2Q13561 401 aaKnown RBP12.49□□□□□ -0.41
SMPD4-214ENST00000455548 KLK9Q2XQG4 91 aa12.49□□□□□ -0.41
SMPD4-214ENST00000455548 C15orf32Q32M92 178 aa12.49□□□□□ -0.41
SMPD4-214ENST00000455548 OR4C16Q8NGL9 310 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms