RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 NAA60Q9H7X0 242 aa21.81■■□□□ 1.08
SMARCC1-203ENST00000454240 CRYM-AS1A6NIL9 109 aa21.8■■□□□ 1.08
SMARCC1-203ENST00000454240 UCP1P25874 307 aa21.8■■□□□ 1.08
SMARCC1-203ENST00000454240 SLC6A1P30531 599 aa21.8■■□□□ 1.08
SMARCC1-203ENST00000454240 SP6Q3SY56 376 aa21.8■■□□□ 1.08
SMARCC1-203ENST00000454240 ZNF695Q8IW36 515 aa21.8■■□□□ 1.08
SMARCC1-203ENST00000454240 ZNF491Q8N8L2 437 aa21.8■■□□□ 1.08
SMARCC1-203ENST00000454240 S100ZQ8WXG8 99 aa21.8■■□□□ 1.08
SMARCC1-203ENST00000454240 TMEM230Q96A57 120 aa21.8■■□□□ 1.08
SMARCC1-203ENST00000454240 TEX13DA0A0J9YY54 714 aaPredicted RBP21.79■■□□□ 1.08
SMARCC1-203ENST00000454240 A0A1B0GW64 132 aa21.79■■□□□ 1.08
SMARCC1-203ENST00000454240 NAP1L6A6NFF2 107 aa21.79■■□□□ 1.08
SMARCC1-203ENST00000454240 TEX22C9J3V5 150 aa21.79■■□□□ 1.08
SMARCC1-203ENST00000454240 APELAP0DMC3 54 aa21.79■■□□□ 1.08
SMARCC1-203ENST00000454240 MYOD1P15172 320 aa21.79■■□□□ 1.08
SMARCC1-203ENST00000454240 ADAD2Q8NCV1 583 aaKnown RBP21.79■■□□□ 1.08
SMARCC1-203ENST00000454240 KLHL30-AS1Q8NEE0 82 aa21.79■■□□□ 1.08
SMARCC1-203ENST00000454240 CASTOR1Q8WTX7 329 aa21.79■■□□□ 1.08
SMARCC1-203ENST00000454240 UBE2E2Q96LR5 201 aa21.79■■□□□ 1.08
SMARCC1-203ENST00000454240 SLC25A21Q9BQT8 299 aaPredicted RBP21.79■■□□□ 1.08
SMARCC1-203ENST00000454240 CGB1A6NKQ9 187 aa21.78■■□□□ 1.08
SMARCC1-203ENST00000454240 H3BUA1 57 aa21.78■■□□□ 1.08
SMARCC1-203ENST00000454240 BRI3O95415 125 aa21.78■■□□□ 1.08
SMARCC1-203ENST00000454240 OR9G9P0C7N8 305 aa21.78■■□□□ 1.08
SMARCC1-203ENST00000454240 CD40LGP29965 261 aa21.78■■□□□ 1.08
SMARCC1-203ENST00000454240 OR5AC1P0C628 307 aa21.77■■□□□ 1.08
SMARCC1-203ENST00000454240 C8orf86Q6ZUL3 223 aa21.77■■□□□ 1.08
SMARCC1-203ENST00000454240 GLYATL2Q8WU03 294 aa21.77■■□□□ 1.08
SMARCC1-203ENST00000454240 MS4A10Q96PG2 267 aa21.77■■□□□ 1.08
SMARCC1-203ENST00000454240 CCDC32Q9BV29 185 aa21.77■■□□□ 1.08
SMARCC1-203ENST00000454240 TMEM222Q9H0R3 208 aa21.77■■□□□ 1.08
SMARCC1-203ENST00000454240 SLA2Q9H6Q3 261 aa21.77■■□□□ 1.08
SMARCC1-203ENST00000454240 HMX3A6NHT5 357 aa21.76■■□□□ 1.07
SMARCC1-203ENST00000454240 NUDT19A8MXV4 375 aa21.76■■□□□ 1.07
SMARCC1-203ENST00000454240 CDS2O95674 445 aa21.76■■□□□ 1.07
SMARCC1-203ENST00000454240 OR2B8PP59922 312 aa21.76■■□□□ 1.07
SMARCC1-203ENST00000454240 SGPP2Q8IWX5 399 aa21.76■■□□□ 1.07
SMARCC1-203ENST00000454240 TTC9CQ8N5M4 171 aa21.76■■□□□ 1.07
SMARCC1-203ENST00000454240 GALNT14Q96FL9 552 aa21.76■■□□□ 1.07
SMARCC1-203ENST00000454240 FYTTD1Q96QD9 318 aaKnown RBP21.76■■□□□ 1.07
SMARCC1-203ENST00000454240 TSC22D3Q99576 134 aa21.76■■□□□ 1.07
SMARCC1-203ENST00000454240 C7orf50Q9BRJ6 194 aaKnown RBP21.76■■□□□ 1.07
SMARCC1-203ENST00000454240 COMMD5Q9GZQ3 224 aa21.76■■□□□ 1.07
SMARCC1-203ENST00000454240 LINC00854A0A1B0GVQ3 168 aa21.75■■□□□ 1.07
SMARCC1-203ENST00000454240 SNAPC5O75971 98 aa21.75■■□□□ 1.07
SMARCC1-203ENST00000454240 IGKV1-5P01602 117 aa21.75■■□□□ 1.07
SMARCC1-203ENST00000454240 DHODHQ02127 395 aa21.75■■□□□ 1.07
SMARCC1-203ENST00000454240 TRIM16LQ309B1 348 aa21.75■■□□□ 1.07
SMARCC1-203ENST00000454240 H2BFWTQ7Z2G1 175 aa21.75■■□□□ 1.07
SMARCC1-203ENST00000454240 C4orf3Q8WVX3 66 aa21.75■■□□□ 1.07
SMARCC1-203ENST00000454240 NSG2Q9Y328 171 aa21.75■■□□□ 1.07
SMARCC1-203ENST00000454240 TEX50A0A1B0GTY4 177 aa21.74■■□□□ 1.07
SMARCC1-203ENST00000454240 CENPXA8MT69 81 aa21.74■■□□□ 1.07
SMARCC1-203ENST00000454240 P0C879 139 aa21.74■■□□□ 1.07
SMARCC1-203ENST00000454240 AKR1C4P17516 323 aa21.74■■□□□ 1.07
SMARCC1-203ENST00000454240 CCR6P51684 374 aa21.74■■□□□ 1.07
SMARCC1-203ENST00000454240 ETV3LQ6ZN32 361 aa21.74■■□□□ 1.07
SMARCC1-203ENST00000454240 GNB4Q9HAV0 340 aa21.74■■□□□ 1.07
SMARCC1-203ENST00000454240 ZNF355PQ9NSJ1 428 aa21.74■■□□□ 1.07
SMARCC1-203ENST00000454240 PRNDQ9UKY0 176 aa21.74■■□□□ 1.07
SMARCC1-203ENST00000454240 KCNIP3Q9Y2W7 256 aa21.74■■□□□ 1.07
SMARCC1-203ENST00000454240 PLA2G10O15496 165 aa21.73■■□□□ 1.07
SMARCC1-203ENST00000454240 ATG12O94817 140 aa21.73■■□□□ 1.07
SMARCC1-203ENST00000454240 TRGV3P03979 118 aa21.73■■□□□ 1.07
SMARCC1-203ENST00000454240 BTCP35070 178 aa21.73■■□□□ 1.07
SMARCC1-203ENST00000454240 TPPP2P59282 170 aa21.73■■□□□ 1.07
SMARCC1-203ENST00000454240 SUPT4H1P63272 117 aaKnown RBP21.73■■□□□ 1.07
SMARCC1-203ENST00000454240 RBMS2Q15434 407 aaKnown RBP21.73■■□□□ 1.07
SMARCC1-203ENST00000454240 SLC25A42Q86VD7 318 aa21.73■■□□□ 1.07
SMARCC1-203ENST00000454240 LHFPL5Q8TAF8 219 aa21.73■■□□□ 1.07
SMARCC1-203ENST00000454240 TMEM14BQ9NUH8 114 aa21.73■■□□□ 1.07
SMARCC1-203ENST00000454240 COA4Q9NYJ1 87 aa21.73■■□□□ 1.07
SMARCC1-203ENST00000454240 C15orf61A6NNL5 157 aa21.72■■□□□ 1.07
SMARCC1-203ENST00000454240 NPIPB5A8MRT5 1133 aa21.72■■□□□ 1.07
SMARCC1-203ENST00000454240 RUNX1Q01196 453 aa21.72■■□□□ 1.07
SMARCC1-203ENST00000454240 OR1L8Q8NGR8 309 aa21.72■■□□□ 1.07
SMARCC1-203ENST00000454240 TMEM56Q96MV1 263 aa21.72■■□□□ 1.07
SMARCC1-203ENST00000454240 SRSF8Q9BRL6 282 aaKnown RBP21.72■■□□□ 1.07
SMARCC1-203ENST00000454240 QTRT1Q9BXR0 403 aaKnown RBP21.72■■□□□ 1.07
SMARCC1-203ENST00000454240 FKBP11Q9NYL4 201 aa21.72■■□□□ 1.07
SMARCC1-203ENST00000454240 OR51B2Q9Y5P1 312 aa21.72■■□□□ 1.07
SMARCC1-203ENST00000454240 TMEM56-RWDD3S4R434 201 aa21.72■■□□□ 1.07
SMARCC1-203ENST00000454240 DBX1A6NMT0 343 aa21.71■■□□□ 1.07
SMARCC1-203ENST00000454240 I3L521 148 aa21.71■■□□□ 1.07
SMARCC1-203ENST00000454240 CRYGCP07315 174 aa21.71■■□□□ 1.07
SMARCC1-203ENST00000454240 AREGP15514 252 aa21.71■■□□□ 1.07
SMARCC1-203ENST00000454240 TMEM187Q14656 261 aa21.71■■□□□ 1.07
SMARCC1-203ENST00000454240 ZNF846Q147U1 533 aa21.71■■□□□ 1.07
SMARCC1-203ENST00000454240 TMED4Q7Z7H5 227 aa21.71■■□□□ 1.07
SMARCC1-203ENST00000454240 SELENOHQ8IZQ5 122 aaKnown RBP21.71■■□□□ 1.07
SMARCC1-203ENST00000454240 RAX2Q96IS3 184 aa21.71■■□□□ 1.07
SMARCC1-203ENST00000454240 WDR12Q9GZL7 423 aaKnown RBP21.71■■□□□ 1.07
SMARCC1-203ENST00000454240 NDUFA4L2Q9NRX3 87 aa21.71■■□□□ 1.07
SMARCC1-203ENST00000454240 ZNF257Q9Y2Q1 563 aa21.71■■□□□ 1.07
SMARCC1-203ENST00000454240 IGLC7A0M8Q6 106 aa21.7■■□□□ 1.06
SMARCC1-203ENST00000454240 NDUFB6O95139 128 aa21.7■■□□□ 1.06
SMARCC1-203ENST00000454240 PF4P02776 101 aa21.7■■□□□ 1.06
SMARCC1-203ENST00000454240 TRAPPC2P0DI81 140 aa21.7■■□□□ 1.06
SMARCC1-203ENST00000454240 TRAPPC2BP0DI82 140 aa21.7■■□□□ 1.06
SMARCC1-203ENST00000454240 MYCNOSP40205 109 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms