RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 A6NDX4 124 aa15.35■□□□□ 0.05
RPS28-202ENST00000449223 H0YIZ8 118 aa15.35■□□□□ 0.05
RPS28-202ENST00000449223 H3BUX3 64 aa15.35■□□□□ 0.05
RPS28-202ENST00000449223 FGF16O43320 207 aa15.35■□□□□ 0.05
RPS28-202ENST00000449223 RBMXL2O75526 392 aaKnown RBP15.35■□□□□ 0.05
RPS28-202ENST00000449223 SPCS3P61009 180 aa15.35■□□□□ 0.05
RPS28-202ENST00000449223 HSPE1P61604 102 aaKnown RBP15.35■□□□□ 0.05
RPS28-202ENST00000449223 LRRC37A5PQ49AS3 106 aa15.35■□□□□ 0.05
RPS28-202ENST00000449223 PRSS54Q6PEW0 395 aa15.35■□□□□ 0.05
RPS28-202ENST00000449223 C16orf82Q7Z2V1 217 aa15.35■□□□□ 0.05
RPS28-202ENST00000449223 C22orf15Q8WYQ4 148 aa15.35■□□□□ 0.05
RPS28-202ENST00000449223 QTRT1Q9BXR0 403 aaKnown RBP15.35■□□□□ 0.05
RPS28-202ENST00000449223 FBXL15Q9H469 300 aa15.35■□□□□ 0.05
RPS28-202ENST00000449223 ANK3Q12955 4377 aaKnown RBP15.34■□□□□ 0.05
RPS28-202ENST00000449223 SMLR1H3BR10 107 aa15.34■□□□□ 0.05
RPS28-202ENST00000449223 MED6O75586 246 aa15.34■□□□□ 0.05
RPS28-202ENST00000449223 SRP14P37108 136 aaKnown RBP15.34■□□□□ 0.05
RPS28-202ENST00000449223 SCGB2A2Q13296 93 aa15.34■□□□□ 0.05
RPS28-202ENST00000449223 ZFP69Q49AA0 526 aa15.34■□□□□ 0.05
RPS28-202ENST00000449223 IL17RELQ6ZVW7 336 aa15.34■□□□□ 0.05
RPS28-202ENST00000449223 Q8N9W7 124 aa15.34■□□□□ 0.05
RPS28-202ENST00000449223 CDC42EP3Q9UKI2 254 aa15.34■□□□□ 0.05
RPS28-202ENST00000449223 OR51B2Q9Y5P1 312 aa15.34■□□□□ 0.05
RPS28-202ENST00000449223 NSD1Q96L73 2696 aaPredicted RBP15.34■□□□□ 0.05
RPS28-202ENST00000449223 CYSRT1A8MQ03 144 aa15.33■□□□□ 0.05
RPS28-202ENST00000449223 INS-IGF2F8WCM5 200 aa15.33■□□□□ 0.05
RPS28-202ENST00000449223 SYNGR2O43760 224 aa15.33■□□□□ 0.05
RPS28-202ENST00000449223 LY86O95711 162 aa15.33■□□□□ 0.05
RPS28-202ENST00000449223 SCGB1D2O95969 90 aa15.33■□□□□ 0.05
RPS28-202ENST00000449223 RLN2P04090 185 aa15.33■□□□□ 0.05
RPS28-202ENST00000449223 S100A10P60903 97 aa15.33■□□□□ 0.05
RPS28-202ENST00000449223 POLR2GP62487 172 aaKnown RBP eCLIP15.33■□□□□ 0.05
RPS28-202ENST00000449223 SSBP2P81877 361 aaPredicted RBP15.33■□□□□ 0.05
RPS28-202ENST00000449223 TMEM65Q6PI78 240 aa15.33■□□□□ 0.05
RPS28-202ENST00000449223 OR11H4Q8NGC9 324 aa15.33■□□□□ 0.05
RPS28-202ENST00000449223 SSMEM1Q8WWF3 244 aa15.33■□□□□ 0.05
RPS28-202ENST00000449223 HYLS1Q96M11 299 aa15.33■□□□□ 0.05
RPS28-202ENST00000449223 RAB40CQ96S21 281 aa15.33■□□□□ 0.05
RPS28-202ENST00000449223 MBD2Q9UBB5 411 aa15.33■□□□□ 0.05
RPS28-202ENST00000449223 MOB4Q9Y3A3 225 aa15.33■□□□□ 0.05
RPS28-202ENST00000449223 PLXNB1O43157 2135 aa15.33■□□□□ 0.04
RPS28-202ENST00000449223 TEX50A0A1B0GTY4 177 aa15.33■□□□□ 0.04
RPS28-202ENST00000449223 HMSDA8MTL9 139 aa15.33■□□□□ 0.04
RPS28-202ENST00000449223 HLA-DRB1P01911 266 aa15.33■□□□□ 0.04
RPS28-202ENST00000449223 COMPP49747 757 aaPredicted RBP15.33■□□□□ 0.04
RPS28-202ENST00000449223 TAS2R30P59541 319 aa15.33■□□□□ 0.04
RPS28-202ENST00000449223 PRCDQ00LT1 54 aa15.33■□□□□ 0.04
RPS28-202ENST00000449223 PJVKQ0ZLH3 352 aa15.33■□□□□ 0.04
RPS28-202ENST00000449223 CLEC9AQ6UXN8 241 aa15.33■□□□□ 0.04
RPS28-202ENST00000449223 THAP6Q8TBB0 222 aa15.33■□□□□ 0.04
RPS28-202ENST00000449223 SLC25A33Q9BSK2 321 aa15.33■□□□□ 0.04
RPS28-202ENST00000449223 COMMD5Q9GZQ3 224 aa15.33■□□□□ 0.04
RPS28-202ENST00000449223 NDUFA4L2Q9NRX3 87 aa15.33■□□□□ 0.04
RPS28-202ENST00000449223 OR5AC2Q9NZP5 309 aa15.33■□□□□ 0.04
RPS28-202ENST00000449223 LSM5Q9Y4Y9 91 aaKnown RBP15.33■□□□□ 0.04
RPS28-202ENST00000449223 WSB1Q9Y6I7 421 aa15.33■□□□□ 0.04
RPS28-202ENST00000449223 NCBP2LA6PVI3 153 aaKnown RBP15.32■□□□□ 0.04
RPS28-202ENST00000449223 E5RGE8 158 aa15.32■□□□□ 0.04
RPS28-202ENST00000449223 M0QZK8 103 aa15.32■□□□□ 0.04
RPS28-202ENST00000449223 IGHV4-59P01825 116 aa15.32■□□□□ 0.04
RPS28-202ENST00000449223 PLGLAQ15195 96 aa15.32■□□□□ 0.04
RPS28-202ENST00000449223 ZNF562Q6V9R5 426 aa15.32■□□□□ 0.04
RPS28-202ENST00000449223 NOXA1Q86UR1 476 aa15.32■□□□□ 0.04
RPS28-202ENST00000449223 C5orf56Q8N8D9 126 aa15.32■□□□□ 0.04
RPS28-202ENST00000449223 OR1L8Q8NGR8 309 aa15.32■□□□□ 0.04
RPS28-202ENST00000449223 MAGT1Q9H0U3 335 aa15.32■□□□□ 0.04
RPS28-202ENST00000449223 RBKSQ9H477 322 aa15.32■□□□□ 0.04
RPS28-202ENST00000449223 MTORP42345 2549 aa15.32■□□□□ 0.04
RPS28-202ENST00000449223 WRBO00258 174 aa15.31■□□□□ 0.04
RPS28-202ENST00000449223 FCN1O00602 326 aa15.31■□□□□ 0.04
RPS28-202ENST00000449223 CHST1O43916 411 aa15.31■□□□□ 0.04
RPS28-202ENST00000449223 IFNA17P01571 189 aa15.31■□□□□ 0.04
RPS28-202ENST00000449223 PVALBP20472 110 aaPredicted RBP15.31■□□□□ 0.04
RPS28-202ENST00000449223 TMEM86BQ8N661 226 aa15.31■□□□□ 0.04
RPS28-202ENST00000449223 DTD1Q8TEA8 209 aa15.31■□□□□ 0.04
RPS28-202ENST00000449223 ZDHHC16Q969W1 377 aa15.31■□□□□ 0.04
RPS28-202ENST00000449223 CIB3Q96Q77 187 aaPredicted RBP15.31■□□□□ 0.04
RPS28-202ENST00000449223 CGB1A6NKQ9 187 aa15.3■□□□□ 0.04
RPS28-202ENST00000449223 SSSCA1O60232 199 aa15.3■□□□□ 0.04
RPS28-202ENST00000449223 ACTL6BO94805 426 aa15.3■□□□□ 0.04
RPS28-202ENST00000449223 NXPH3O95157 252 aa15.3■□□□□ 0.04
RPS28-202ENST00000449223 TMEM50AO95807 157 aa15.3■□□□□ 0.04
RPS28-202ENST00000449223 CA2P00918 260 aa15.3■□□□□ 0.04
RPS28-202ENST00000449223 AMY1AP04745 511 aa15.3■□□□□ 0.04
RPS28-202ENST00000449223 VDAC2P45880 294 aaPredicted RBP15.3■□□□□ 0.04
RPS28-202ENST00000449223 PAX9P55771 341 aa15.3■□□□□ 0.04
RPS28-202ENST00000449223 TMEM219Q86XT9 240 aa15.3■□□□□ 0.04
RPS28-202ENST00000449223 SMIM8Q96KF7 97 aa15.3■□□□□ 0.04
RPS28-202ENST00000449223 SRSF8Q9BRL6 282 aaKnown RBP15.3■□□□□ 0.04
RPS28-202ENST00000449223 VPREB3Q9UKI3 123 aa15.3■□□□□ 0.04
RPS28-202ENST00000449223 TNFSF18Q9UNG2 199 aa15.3■□□□□ 0.04
RPS28-202ENST00000449223 BOLA2-SMG1P6H3BVE0 249 aa15.29■□□□□ 0.04
RPS28-202ENST00000449223 HNRNPCP07910 306 aaKnown RBP eCLIP15.29■□□□□ 0.04
RPS28-202ENST00000449223 MYOD1P15172 320 aa15.29■□□□□ 0.04
RPS28-202ENST00000449223 P2RY1P47900 373 aa15.29■□□□□ 0.04
RPS28-202ENST00000449223 RASL11BQ9BPW5 248 aa15.29■□□□□ 0.04
RPS28-202ENST00000449223 F8P00451 2351 aa15.29■□□□□ 0.04
RPS28-202ENST00000449223 FXYD6-FXYD2A0A087WZ82 144 aa15.28■□□□□ 0.04
RPS28-202ENST00000449223 A0A1B0GW64 132 aa15.28■□□□□ 0.04
RPS28-202ENST00000449223 BTBD17A6NE02 478 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms