RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 DPPA5A6NC42 116 aa11.29□□□□□ -0.6
USP39-206ENST00000448971 MARCH11A6NNE9 402 aa11.29□□□□□ -0.6
USP39-206ENST00000448971 I3L521 148 aa11.29□□□□□ -0.6
USP39-206ENST00000448971 CD74P04233 296 aa11.29□□□□□ -0.6
USP39-206ENST00000448971 OR8U8P0C7N1 319 aa11.29□□□□□ -0.6
USP39-206ENST00000448971 OR9G9P0C7N8 305 aa11.29□□□□□ -0.6
USP39-206ENST00000448971 MAS1LP35410 378 aa11.29□□□□□ -0.6
USP39-206ENST00000448971 UCP3P55916 312 aa11.29□□□□□ -0.6
USP39-206ENST00000448971 DEFA5Q01523 94 aa11.29□□□□□ -0.6
USP39-206ENST00000448971 ZNF616Q08AN1 781 aa11.29□□□□□ -0.6
USP39-206ENST00000448971 KIAA0141Q14154 515 aaPredicted RBP11.29□□□□□ -0.6
USP39-206ENST00000448971 MEF2DQ14814 521 aa11.29□□□□□ -0.6
USP39-206ENST00000448971 DEFB121Q5J5C9 76 aa11.29□□□□□ -0.6
USP39-206ENST00000448971 MCRIP2Q9BUT9 160 aaKnown RBP11.29□□□□□ -0.6
USP39-206ENST00000448971 GPR61Q9BZJ8 451 aa11.29□□□□□ -0.6
USP39-206ENST00000448971 ALX4Q9H161 411 aaPredicted RBP11.29□□□□□ -0.6
USP39-206ENST00000448971 DISC1C4P0D8 188 aa11.28□□□□□ -0.6
USP39-206ENST00000448971 AKAIN1P0CW23 69 aa11.28□□□□□ -0.6
USP39-206ENST00000448971 HLA-GP17693 338 aa11.28□□□□□ -0.6
USP39-206ENST00000448971 PI3P19957 117 aa11.28□□□□□ -0.6
USP39-206ENST00000448971 LPAR6P43657 344 aa11.28□□□□□ -0.6
USP39-206ENST00000448971 RUNX1Q01196 453 aa11.28□□□□□ -0.6
USP39-206ENST00000448971 FHL3Q13643 280 aa11.28□□□□□ -0.6
USP39-206ENST00000448971 POU2AF1Q16633 256 aa11.28□□□□□ -0.6
USP39-206ENST00000448971 LHFPL1Q86WI0 220 aa11.28□□□□□ -0.6
USP39-206ENST00000448971 OR1N2Q8NGR9 330 aa11.28□□□□□ -0.6
USP39-206ENST00000448971 ZNF486Q96H40 463 aaPredicted RBP11.28□□□□□ -0.6
USP39-206ENST00000448971 A0A0G2JLM5 398 aa11.27□□□□□ -0.61
USP39-206ENST00000448971 HMX3A6NHT5 357 aa11.27□□□□□ -0.61
USP39-206ENST00000448971 LINC01619G3V211 115 aa11.27□□□□□ -0.61
USP39-206ENST00000448971 GSTZ1O43708 216 aaPredicted RBP11.27□□□□□ -0.61
USP39-206ENST00000448971 MYOD1P15172 320 aa11.27□□□□□ -0.61
USP39-206ENST00000448971 PIGPP57054 158 aa11.27□□□□□ -0.61
USP39-206ENST00000448971 EGFEM1PQ0D2K5 195 aa11.27□□□□□ -0.61
USP39-206ENST00000448971 PYDC2Q56P42 97 aa11.27□□□□□ -0.61
USP39-206ENST00000448971 ADAD2Q8NCV1 583 aaKnown RBP11.27□□□□□ -0.61
USP39-206ENST00000448971 OR4C16Q8NGL9 310 aa11.27□□□□□ -0.61
USP39-206ENST00000448971 WWC2-AS2Q96NR7 200 aa11.27□□□□□ -0.61
USP39-206ENST00000448971 COMMD5Q9GZQ3 224 aa11.27□□□□□ -0.61
USP39-206ENST00000448971 COPZ2Q9P299 210 aa11.27□□□□□ -0.61
USP39-206ENST00000448971 IGHV4OR15-8A0A075B7B6 117 aa11.26□□□□□ -0.61
USP39-206ENST00000448971 A0A087WW49 117 aa11.26□□□□□ -0.61
USP39-206ENST00000448971 TEX22C9J3V5 150 aa11.26□□□□□ -0.61
USP39-206ENST00000448971 UPK2O00526 184 aa11.26□□□□□ -0.61
USP39-206ENST00000448971 KRASP01116 189 aa11.26□□□□□ -0.61
USP39-206ENST00000448971 G6PCP35575 357 aa11.26□□□□□ -0.61
USP39-206ENST00000448971 ECI1P42126 302 aa11.26□□□□□ -0.61
USP39-206ENST00000448971 SLC25A42Q86VD7 318 aa11.26□□□□□ -0.61
USP39-206ENST00000448971 CCDC71LQ8N9Z2 235 aa11.26□□□□□ -0.61
USP39-206ENST00000448971 OR13C8Q8NGS7 320 aa11.26□□□□□ -0.61
USP39-206ENST00000448971 TERB2Q8NHR7 220 aa11.26□□□□□ -0.61
USP39-206ENST00000448971 ZFAND1Q8TCF1 268 aa11.26□□□□□ -0.61
USP39-206ENST00000448971 MARCH1Q8TCQ1 289 aa11.26□□□□□ -0.61
USP39-206ENST00000448971 C14orf166Q9Y224 244 aaKnown RBP11.26□□□□□ -0.61
USP39-206ENST00000448971 V9GYH0 126 aa11.26□□□□□ -0.61
USP39-206ENST00000448971 TRAV3A0A0B4J244 114 aa11.25□□□□□ -0.61
USP39-206ENST00000448971 ANKRD20A5PA0PJZ0 165 aa11.25□□□□□ -0.61
USP39-206ENST00000448971 PRH1P02810 166 aa11.25□□□□□ -0.61
USP39-206ENST00000448971 SERPINE2P07093 398 aa11.25□□□□□ -0.61
USP39-206ENST00000448971 ZNF735P0CB33 412 aa11.25□□□□□ -0.61
USP39-206ENST00000448971 HOXD3P31249 432 aaPredicted RBP11.25□□□□□ -0.61
USP39-206ENST00000448971 SLURP1P55000 103 aa11.25□□□□□ -0.61
USP39-206ENST00000448971 RND3P61587 244 aa11.25□□□□□ -0.61
USP39-206ENST00000448971 ZNF585BQ52M93 769 aa11.25□□□□□ -0.61
USP39-206ENST00000448971 PRRT1Q99946 306 aa11.25□□□□□ -0.61
USP39-206ENST00000448971 B9D2Q9BPU9 175 aa11.25□□□□□ -0.61
USP39-206ENST00000448971 FAM212BQ9NTI7 297 aaPredicted RBP11.25□□□□□ -0.61
USP39-206ENST00000448971 MCUBQ9NWR8 336 aa11.25□□□□□ -0.61
USP39-206ENST00000448971 ZNF257Q9Y2Q1 563 aa11.25□□□□□ -0.61
USP39-206ENST00000448971 STAB2Q8WWQ8 2551 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 FAM223BA6NKX1 122 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 NPIPB5A8MRT5 1133 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 SEC14L6B5MCN3 397 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 E7EUB6 86 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 H0Y980 276 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 SNAPC5O75971 98 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 DHFRP00374 187 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 CTSDP07339 412 aaPredicted RBP11.24□□□□□ -0.61
USP39-206ENST00000448971 IL6RP08887 468 aaPredicted RBP11.24□□□□□ -0.61
USP39-206ENST00000448971 AREGP15514 252 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 AKR1C2P52895 323 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 OR2B8PP59922 312 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 RHOGP84095 191 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 EXOSC2Q13868 293 aaKnown RBP11.24□□□□□ -0.61
USP39-206ENST00000448971 SPANXN2Q5MJ10 180 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 C19orf35Q6ZS72 473 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 FAM223AQ8IWN6 122 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 Q8N402 240 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 TTC9CQ8N5M4 171 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 OR51S1Q8NGJ8 323 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 MRGPRFQ96AM1 343 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 USMG5Q96IX5 58 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 TSC22D3Q99576 134 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 SOSTQ9BQB4 213 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 THAP7Q9BT49 309 aaPredicted RBP11.24□□□□□ -0.61
USP39-206ENST00000448971 NDUFA13Q9P0J0 144 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 NSG2Q9Y328 171 aa11.24□□□□□ -0.61
USP39-206ENST00000448971 C3orf85A0A1B0GTC6 90 aa11.23□□□□□ -0.61
USP39-206ENST00000448971 A0A1B0GW64 132 aa11.23□□□□□ -0.61
USP39-206ENST00000448971 ANKRD34BA5PLL1 514 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms