RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 CADM3Q8N126 398 aa14.34□□□□□ -0.11
CCDC188-202ENST00000444532 ARRDC1Q8N5I2 433 aa14.34□□□□□ -0.11
CCDC188-202ENST00000444532 FYTTD1Q96QD9 318 aaKnown RBP14.34□□□□□ -0.11
CCDC188-202ENST00000444532 PEF1Q9UBV8 284 aaKnown RBP14.34□□□□□ -0.11
CCDC188-202ENST00000444532 RSL24D1Q9UHA3 163 aaKnown RBP14.34□□□□□ -0.11
CCDC188-202ENST00000444532 ANKRD34BA5PLL1 514 aa14.33□□□□□ -0.12
CCDC188-202ENST00000444532 LPAR6P43657 344 aa14.33□□□□□ -0.12
CCDC188-202ENST00000444532 RHOGP84095 191 aa14.33□□□□□ -0.12
CCDC188-202ENST00000444532 ZNF585BQ52M93 769 aa14.33□□□□□ -0.12
CCDC188-202ENST00000444532 PHLDA2Q53GA4 152 aa14.33□□□□□ -0.12
CCDC188-202ENST00000444532 ACSM6Q6P461 480 aa14.33□□□□□ -0.12
CCDC188-202ENST00000444532 TMEM229BQ8NBD8 167 aa14.33□□□□□ -0.12
CCDC188-202ENST00000444532 NECAP1Q8NC96 275 aa14.33□□□□□ -0.12
CCDC188-202ENST00000444532 DIRAS2Q96HU8 199 aa14.33□□□□□ -0.12
CCDC188-202ENST00000444532 AKIP1Q9NQ31 210 aa14.33□□□□□ -0.12
CCDC188-202ENST00000444532 TMEM140Q9NV12 185 aa14.33□□□□□ -0.12
CCDC188-202ENST00000444532 A0A1B0GW64 132 aa14.32□□□□□ -0.12
CCDC188-202ENST00000444532 MARCH11A6NNE9 402 aa14.32□□□□□ -0.12
CCDC188-202ENST00000444532 RBMXL2O75526 392 aaKnown RBP14.32□□□□□ -0.12
CCDC188-202ENST00000444532 DHFRP00374 187 aa14.32□□□□□ -0.12
CCDC188-202ENST00000444532 PRH1P02810 166 aa14.32□□□□□ -0.12
CCDC188-202ENST00000444532 CRYGCP07315 174 aa14.32□□□□□ -0.12
CCDC188-202ENST00000444532 TAS2R19P59542 299 aa14.32□□□□□ -0.12
CCDC188-202ENST00000444532 ZNF45Q02386 682 aa14.32□□□□□ -0.12
CCDC188-202ENST00000444532 ATP5G2Q06055 141 aa14.32□□□□□ -0.12
CCDC188-202ENST00000444532 DEFB121Q5J5C9 76 aa14.32□□□□□ -0.12
CCDC188-202ENST00000444532 LHFPL1Q86WI0 220 aa14.32□□□□□ -0.12
CCDC188-202ENST00000444532 COMMD5Q9GZQ3 224 aa14.32□□□□□ -0.12
CCDC188-202ENST00000444532 SLIRPQ9GZT3 109 aaKnown RBP14.32□□□□□ -0.12
CCDC188-202ENST00000444532 TRAV3A0A0B4J244 114 aa14.31□□□□□ -0.12
CCDC188-202ENST00000444532 ZNF701M0R085 212 aaPredicted RBP14.31□□□□□ -0.12
CCDC188-202ENST00000444532 CTDSPLO15194 276 aa14.31□□□□□ -0.12
CCDC188-202ENST00000444532 SAP30O75446 220 aa14.31□□□□□ -0.12
CCDC188-202ENST00000444532 CD74P04233 296 aa14.31□□□□□ -0.12
CCDC188-202ENST00000444532 PSMB6P28072 239 aa14.31□□□□□ -0.12
CCDC188-202ENST00000444532 ECI1P42126 302 aa14.31□□□□□ -0.12
CCDC188-202ENST00000444532 OR2B8PP59922 312 aa14.31□□□□□ -0.12
CCDC188-202ENST00000444532 DEFA5Q01523 94 aa14.31□□□□□ -0.12
CCDC188-202ENST00000444532 DCTN2Q13561 401 aaKnown RBP14.31□□□□□ -0.12
CCDC188-202ENST00000444532 FAM209BQ5JX69 171 aa14.31□□□□□ -0.12
CCDC188-202ENST00000444532 TBC1D26Q86UD7 250 aa14.31□□□□□ -0.12
CCDC188-202ENST00000444532 ZNF486Q96H40 463 aaPredicted RBP14.31□□□□□ -0.12
CCDC188-202ENST00000444532 SRSF8Q9BRL6 282 aaKnown RBP14.31□□□□□ -0.12
CCDC188-202ENST00000444532 C6orf62Q9GZU0 229 aaPredicted RBP14.31□□□□□ -0.12
CCDC188-202ENST00000444532 CGB1A6NKQ9 187 aa14.3□□□□□ -0.12
CCDC188-202ENST00000444532 RAB3DO95716 219 aa14.3□□□□□ -0.12
CCDC188-202ENST00000444532 KRASP01116 189 aa14.3□□□□□ -0.12
CCDC188-202ENST00000444532 MYOD1P15172 320 aa14.3□□□□□ -0.12
CCDC188-202ENST00000444532 AREGP15514 252 aa14.3□□□□□ -0.12
CCDC188-202ENST00000444532 CTRB1P17538 263 aa14.3□□□□□ -0.12
CCDC188-202ENST00000444532 KLF5Q13887 457 aaPredicted RBP14.3□□□□□ -0.12
CCDC188-202ENST00000444532 IL18Q14116 193 aa14.3□□□□□ -0.12
CCDC188-202ENST00000444532 KLK9Q2XQG4 91 aa14.3□□□□□ -0.12
CCDC188-202ENST00000444532 CTRB2Q6GPI1 263 aa14.3□□□□□ -0.12
CCDC188-202ENST00000444532 THOC7Q6I9Y2 204 aaKnown RBP14.3□□□□□ -0.12
CCDC188-202ENST00000444532 STEAP1BQ6NZ63 245 aa14.3□□□□□ -0.12
CCDC188-202ENST00000444532 TERB2Q8NHR7 220 aa14.3□□□□□ -0.12
CCDC188-202ENST00000444532 SMIM4Q8WVI0 70 aa14.3□□□□□ -0.12
CCDC188-202ENST00000444532 ELOVL1Q9BW60 279 aa14.3□□□□□ -0.12
CCDC188-202ENST00000444532 NXF2Q9GZY0 626 aaKnown RBP14.3□□□□□ -0.12
CCDC188-202ENST00000444532 KLK9Q9UKQ9 250 aa14.3□□□□□ -0.12
CCDC188-202ENST00000444532 OR2J3O76001 311 aa14.29□□□□□ -0.12
CCDC188-202ENST00000444532 PGAM2P15259 253 aa14.29□□□□□ -0.12
CCDC188-202ENST00000444532 RPA2P15927 270 aa14.29□□□□□ -0.12
CCDC188-202ENST00000444532 HIST1H1BP16401 226 aaKnown RBP14.29□□□□□ -0.12
CCDC188-202ENST00000444532 PTBP1P26599 531 aaKnown RBP eCLIP14.29□□□□□ -0.12
CCDC188-202ENST00000444532 G6PCP35575 357 aa14.29□□□□□ -0.12
CCDC188-202ENST00000444532 RND3P61587 244 aa14.29□□□□□ -0.12
CCDC188-202ENST00000444532 EXOSC2Q13868 293 aaKnown RBP14.29□□□□□ -0.12
CCDC188-202ENST00000444532 C15orf32Q32M92 178 aa14.29□□□□□ -0.12
CCDC188-202ENST00000444532 MCFD2Q8NI22 146 aa14.29□□□□□ -0.12
CCDC188-202ENST00000444532 OR4C12Q96R67 309 aa14.29□□□□□ -0.12
CCDC188-202ENST00000444532 QTRT1Q9BXR0 403 aaKnown RBP14.29□□□□□ -0.12
CCDC188-202ENST00000444532 NDUFA13Q9P0J0 144 aa14.29□□□□□ -0.12
CCDC188-202ENST00000444532 FBXL7Q9UJT9 491 aa14.29□□□□□ -0.12
CCDC188-202ENST00000444532 ZNF256Q9Y2P7 627 aaPredicted RBP14.29□□□□□ -0.12
CCDC188-202ENST00000444532 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.28□□□□□ -0.12
CCDC188-202ENST00000444532 SNAPC5O75971 98 aa14.28□□□□□ -0.12
CCDC188-202ENST00000444532 TRBV12-3P01733 135 aa14.28□□□□□ -0.12
CCDC188-202ENST00000444532 DEFA4P12838 97 aa14.28□□□□□ -0.12
CCDC188-202ENST00000444532 MEF2DQ14814 521 aa14.28□□□□□ -0.12
CCDC188-202ENST00000444532 TATDN3Q17R31 274 aa14.28□□□□□ -0.12
CCDC188-202ENST00000444532 HSD17B13Q7Z5P4 300 aaPredicted RBP14.28□□□□□ -0.12
CCDC188-202ENST00000444532 OR4D10Q8NGI6 311 aa14.28□□□□□ -0.12
CCDC188-202ENST00000444532 OR1L8Q8NGR8 309 aa14.28□□□□□ -0.12
CCDC188-202ENST00000444532 ZFAND1Q8TCF1 268 aa14.28□□□□□ -0.12
CCDC188-202ENST00000444532 FANCD2OSQ96PS1 177 aa14.28□□□□□ -0.12
CCDC188-202ENST00000444532 FKBP11Q9NYL4 201 aa14.28□□□□□ -0.12
CCDC188-202ENST00000444532 TEX50A0A1B0GTY4 177 aa14.27□□□□□ -0.13
CCDC188-202ENST00000444532 IGLC7A0M8Q6 106 aa14.27□□□□□ -0.13
CCDC188-202ENST00000444532 TRAPPC2P0DI81 140 aa14.27□□□□□ -0.13
CCDC188-202ENST00000444532 TRAPPC2BP0DI82 140 aa14.27□□□□□ -0.13
CCDC188-202ENST00000444532 TNFSF8P32971 234 aa14.27□□□□□ -0.13
CCDC188-202ENST00000444532 RPEL1Q2QD12 228 aa14.27□□□□□ -0.13
CCDC188-202ENST00000444532 OR6Q1Q8NGQ2 317 aa14.27□□□□□ -0.13
CCDC188-202ENST00000444532 TSC22D3Q99576 134 aa14.27□□□□□ -0.13
CCDC188-202ENST00000444532 GSTZ1O43708 216 aaPredicted RBP14.26□□□□□ -0.13
CCDC188-202ENST00000444532 REG1AP05451 166 aa14.26□□□□□ -0.13
CCDC188-202ENST00000444532 SERPINE2P07093 398 aa14.26□□□□□ -0.13
CCDC188-202ENST00000444532 PIGPP57054 158 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms