RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 CARHSP1Q9Y2V2 147 aaKnown RBP18.86■□□□□ 0.61
CTDSPL-206ENST00000443503 GBGT1Q8N5D6 347 aa18.86■□□□□ 0.61
CTDSPL-206ENST00000443503 FOXF2Q12947 444 aa18.85■□□□□ 0.61
CTDSPL-206ENST00000443503 PEAR1Q5VY43 1037 aaPredicted RBP18.85■□□□□ 0.61
CTDSPL-206ENST00000443503 GTF3AQ92664 365 aaKnown RBP18.85■□□□□ 0.61
CTDSPL-206ENST00000443503 RBM14Q96PK6 669 aaKnown RBP18.85■□□□□ 0.61
CTDSPL-206ENST00000443503 TMEM250H0YL14 139 aa18.85■□□□□ 0.61
CTDSPL-206ENST00000443503 LIPFP07098 398 aa18.85■□□□□ 0.61
CTDSPL-206ENST00000443503 SRP14P37108 136 aaKnown RBP18.85■□□□□ 0.61
CTDSPL-206ENST00000443503 BPIFA4PQ86YQ2 179 aa18.85■□□□□ 0.61
CTDSPL-206ENST00000443503 SPSB4Q96A44 273 aa18.85■□□□□ 0.61
CTDSPL-206ENST00000443503 EAF1Q96JC9 268 aaPredicted RBP18.85■□□□□ 0.61
CTDSPL-206ENST00000443503 C18orf12Q96KH6 178 aa18.85■□□□□ 0.61
CTDSPL-206ENST00000443503 GPR61Q9BZJ8 451 aa18.85■□□□□ 0.61
CTDSPL-206ENST00000443503 SUPT4H1P63272 117 aaKnown RBP18.85■□□□□ 0.61
CTDSPL-206ENST00000443503 TFF3Q07654 80 aa18.85■□□□□ 0.61
CTDSPL-206ENST00000443503 CLEC2AQ6UVW9 174 aa18.85■□□□□ 0.61
CTDSPL-206ENST00000443503 PCSK4Q6UW60 755 aa18.85■□□□□ 0.61
CTDSPL-206ENST00000443503 CXorf65A6NEN9 183 aa18.85■□□□□ 0.61
CTDSPL-206ENST00000443503 ATXN7O15265 892 aaPredicted RBP18.85■□□□□ 0.61
CTDSPL-206ENST00000443503 FXYD3Q14802 87 aa18.85■□□□□ 0.61
CTDSPL-206ENST00000443503 OR4A47Q6IF82 309 aa18.85■□□□□ 0.61
CTDSPL-206ENST00000443503 WISP1O95388 367 aa18.84■□□□□ 0.61
CTDSPL-206ENST00000443503 FAM106CPP0CH98 169 aa18.84■□□□□ 0.61
CTDSPL-206ENST00000443503 OR51G1Q8NGK1 321 aa18.84■□□□□ 0.61
CTDSPL-206ENST00000443503 RPL30P62888 115 aaKnown RBP18.84■□□□□ 0.61
CTDSPL-206ENST00000443503 RABAC1Q9UI14 185 aa18.84■□□□□ 0.61
CTDSPL-206ENST00000443503 PAM16Q9Y3D7 125 aa18.84■□□□□ 0.61
CTDSPL-206ENST00000443503 TEX50A0A1B0GTY4 177 aa18.84■□□□□ 0.61
CTDSPL-206ENST00000443503 F8VVB4 439 aa18.84■□□□□ 0.61
CTDSPL-206ENST00000443503 F8VWA3 439 aa18.84■□□□□ 0.61
CTDSPL-206ENST00000443503 VN1R17PQ8TDU5 208 aa18.84■□□□□ 0.61
CTDSPL-206ENST00000443503 LRRK1Q38SD2 2015 aa18.84■□□□□ 0.61
CTDSPL-206ENST00000443503 PRSS1P07477 247 aa18.83■□□□□ 0.61
CTDSPL-206ENST00000443503 ZNF525Q8N782 197 aa18.83■□□□□ 0.61
CTDSPL-206ENST00000443503 BMPR1BO00238 502 aa18.83■□□□□ 0.61
CTDSPL-206ENST00000443503 GCHFRP30047 84 aa18.83■□□□□ 0.61
CTDSPL-206ENST00000443503 UNQ5815/PRO19632Q6UWF5 114 aa18.83■□□□□ 0.61
CTDSPL-206ENST00000443503 ZNF497Q6ZNH5 498 aa18.83■□□□□ 0.61
CTDSPL-206ENST00000443503 GATAD1Q8WUU5 269 aa18.83■□□□□ 0.61
CTDSPL-206ENST00000443503 CSRP1P21291 193 aaKnown RBP18.83■□□□□ 0.6
CTDSPL-206ENST00000443503 TMEM191AQ9H0A3 160 aa18.83■□□□□ 0.6
CTDSPL-206ENST00000443503 C17orf100A8MU93 164 aa18.83■□□□□ 0.6
CTDSPL-206ENST00000443503 OSR1Q8TAX0 266 aaPredicted RBP18.83■□□□□ 0.6
CTDSPL-206ENST00000443503 TMEM208Q9BTX3 173 aa18.83■□□□□ 0.6
CTDSPL-206ENST00000443503 FCGR2BP31994 310 aaPredicted RBP18.82■□□□□ 0.6
CTDSPL-206ENST00000443503 Q6ZN92 141 aa18.82■□□□□ 0.6
CTDSPL-206ENST00000443503 LOC105371242A0A075B767 164 aa18.82■□□□□ 0.6
CTDSPL-206ENST00000443503 MOSP00540 346 aa18.82■□□□□ 0.6
CTDSPL-206ENST00000443503 KLRB1Q12918 225 aa18.82■□□□□ 0.6
CTDSPL-206ENST00000443503 IL6RP08887 468 aaPredicted RBP18.82■□□□□ 0.6
CTDSPL-206ENST00000443503 SRP19P09132 144 aaKnown RBP18.82■□□□□ 0.6
CTDSPL-206ENST00000443503 CCL3L1P16619 93 aa18.82■□□□□ 0.6
CTDSPL-206ENST00000443503 ID3Q02535 119 aa18.82■□□□□ 0.6
CTDSPL-206ENST00000443503 DNM1P46Q6ZS02 220 aa18.82■□□□□ 0.6
CTDSPL-206ENST00000443503 WDR31Q8NA23 367 aa18.82■□□□□ 0.6
CTDSPL-206ENST00000443503 MRPL37Q9BZE1 423 aaKnown RBP18.82■□□□□ 0.6
CTDSPL-206ENST00000443503 OR51M1Q9H341 326 aa18.82■□□□□ 0.6
CTDSPL-206ENST00000443503 IGHV3-35A0A0C4DH35 117 aa18.81■□□□□ 0.6
CTDSPL-206ENST00000443503 CDK2AP1O14519 115 aa18.81■□□□□ 0.6
CTDSPL-206ENST00000443503 IL18BPO95998 194 aa18.81■□□□□ 0.6
CTDSPL-206ENST00000443503 ZNF524Q96C55 264 aa18.81■□□□□ 0.6
CTDSPL-206ENST00000443503 FOSL1P15407 271 aa18.81■□□□□ 0.6
CTDSPL-206ENST00000443503 WFDC3Q8IUB2 231 aa18.81■□□□□ 0.6
CTDSPL-206ENST00000443503 E9PQ18 207 aa18.81■□□□□ 0.6
CTDSPL-206ENST00000443503 TCAPO15273 167 aa18.81■□□□□ 0.6
CTDSPL-206ENST00000443503 MT-ND6P03923 174 aa18.81■□□□□ 0.6
CTDSPL-206ENST00000443503 EIF4E3Q8N5X7 224 aaKnown RBP18.8■□□□□ 0.6
CTDSPL-206ENST00000443503 IGHV1-18A0A0C4DH31 117 aa18.8■□□□□ 0.6
CTDSPL-206ENST00000443503 TM4SF5O14894 197 aa18.8■□□□□ 0.6
CTDSPL-206ENST00000443503 RAMP3O60896 148 aa18.8■□□□□ 0.6
CTDSPL-206ENST00000443503 B3GALT5-AS1P59052 145 aa18.8■□□□□ 0.6
CTDSPL-206ENST00000443503 OR2T8A6NH00 312 aa18.8■□□□□ 0.6
CTDSPL-206ENST00000443503 OTX1P32242 354 aaPredicted RBP18.8■□□□□ 0.6
CTDSPL-206ENST00000443503 PPOXP50336 477 aa18.8■□□□□ 0.6
CTDSPL-206ENST00000443503 MUC6Q6W4X9 2439 aa18.8■□□□□ 0.6
CTDSPL-206ENST00000443503 COMPP49747 757 aaPredicted RBP18.8■□□□□ 0.6
CTDSPL-206ENST00000443503 SRSF3P84103 164 aaKnown RBP18.8■□□□□ 0.6
CTDSPL-206ENST00000443503 HOXA4Q00056 320 aaPredicted RBP18.8■□□□□ 0.6
CTDSPL-206ENST00000443503 RNF151Q2KHN1 245 aa18.8■□□□□ 0.6
CTDSPL-206ENST00000443503 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.8■□□□□ 0.6
CTDSPL-206ENST00000443503 TBX15Q96SF7 602 aa18.8■□□□□ 0.6
CTDSPL-206ENST00000443503 IGFBP2P18065 325 aa18.79■□□□□ 0.6
CTDSPL-206ENST00000443503 C5orf24Q7Z6I8 188 aa18.79■□□□□ 0.6
CTDSPL-206ENST00000443503 MFAP4P55083 255 aa18.79■□□□□ 0.6
CTDSPL-206ENST00000443503 FAM90A1Q86YD7 464 aa18.79■□□□□ 0.6
CTDSPL-206ENST00000443503 HSPB9Q9BQS6 159 aa18.79■□□□□ 0.6
CTDSPL-206ENST00000443503 TRGC1P0CF51 173 aa18.79■□□□□ 0.6
CTDSPL-206ENST00000443503 PF4V1P10720 104 aa18.79■□□□□ 0.6
CTDSPL-206ENST00000443503 LOXL3P58215 753 aa18.79■□□□□ 0.6
CTDSPL-206ENST00000443503 FBXL15Q9H469 300 aa18.79■□□□□ 0.6
CTDSPL-206ENST00000443503 PLXNA4Q9HCM2 1894 aa18.79■□□□□ 0.6
CTDSPL-206ENST00000443503 HTN1P15515 57 aa18.78■□□□□ 0.6
CTDSPL-206ENST00000443503 ATP5IP56385 69 aaPredicted RBP18.78■□□□□ 0.6
CTDSPL-206ENST00000443503 KIAA1644Q3SXP7 199 aa18.78■□□□□ 0.6
CTDSPL-206ENST00000443503 ZNF324BQ6AW86 544 aaPredicted RBP18.78■□□□□ 0.6
CTDSPL-206ENST00000443503 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.78■□□□□ 0.6
CTDSPL-206ENST00000443503 MRPL20Q9BYC9 149 aaKnown RBP18.78■□□□□ 0.6
CTDSPL-206ENST00000443503 SPG11Q96JI7 2443 aa18.78■□□□□ 0.6
CTDSPL-206ENST00000443503 M0R143 59 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 190.3 ms