RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 HIST1H1BP16401 226 aaKnown RBP8.08□□□□□ -1.12
MCF2L-216ENST00000439475 ECI1P42126 302 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 SLURP1P55000 103 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 KRTAP10-11P60412 298 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 MEF2DQ14814 521 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 PHLDA2Q53GA4 152 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 C10orf55Q5SWW7 151 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 ZNF343Q6P1L6 599 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 HSD17B13Q7Z5P4 300 aaPredicted RBP8.08□□□□□ -1.12
MCF2L-216ENST00000439475 CADM3Q8N126 398 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 NECAP1Q8NC96 275 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 OR6Q1Q8NGQ2 317 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 ZFAND1Q8TCF1 268 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 ISOC1Q96CN7 298 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 ZNF486Q96H40 463 aaPredicted RBP8.08□□□□□ -1.12
MCF2L-216ENST00000439475 TSC22D3Q99576 134 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 SRSF8Q9BRL6 282 aaKnown RBP8.08□□□□□ -1.12
MCF2L-216ENST00000439475 FXYD6Q9H0Q3 95 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 MIXL1Q9H2W2 232 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 TMEM140Q9NV12 185 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 FKBP11Q9NYL4 201 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 THYN1Q9P016 225 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 RSL24D1Q9UHA3 163 aaKnown RBP8.08□□□□□ -1.12
MCF2L-216ENST00000439475 TRBV9A0A0B4J1U6 114 aa8.07□□□□□ -1.12
MCF2L-216ENST00000439475 MARCH11A6NNE9 402 aa8.07□□□□□ -1.12
MCF2L-216ENST00000439475 DISC1C4P0D8 188 aa8.07□□□□□ -1.12
MCF2L-216ENST00000439475 H3BMQ9 156 aa8.07□□□□□ -1.12
MCF2L-216ENST00000439475 SAP30O75446 220 aa8.07□□□□□ -1.12
MCF2L-216ENST00000439475 ATG12O94817 140 aa8.07□□□□□ -1.12
MCF2L-216ENST00000439475 S1PR2O95136 353 aa8.07□□□□□ -1.12
MCF2L-216ENST00000439475 KRASP01116 189 aa8.07□□□□□ -1.12
MCF2L-216ENST00000439475 CD3DP04234 171 aa8.07□□□□□ -1.12
MCF2L-216ENST00000439475 CRYGCP07315 174 aa8.07□□□□□ -1.12
MCF2L-216ENST00000439475 IL6RP08887 468 aaPredicted RBP8.07□□□□□ -1.12
MCF2L-216ENST00000439475 PSMB6P28072 239 aa8.07□□□□□ -1.12
MCF2L-216ENST00000439475 RHOGP84095 191 aa8.07□□□□□ -1.12
MCF2L-216ENST00000439475 RPEL1Q2QD12 228 aa8.07□□□□□ -1.12
MCF2L-216ENST00000439475 STEAP1BQ6NZ63 245 aa8.07□□□□□ -1.12
MCF2L-216ENST00000439475 ACSM6Q6P461 480 aa8.07□□□□□ -1.12
MCF2L-216ENST00000439475 TBC1D26Q86UD7 250 aa8.07□□□□□ -1.12
MCF2L-216ENST00000439475 LAX1Q8IWV1 398 aa8.07□□□□□ -1.12
MCF2L-216ENST00000439475 CCDC71LQ8N9Z2 235 aa8.07□□□□□ -1.12
MCF2L-216ENST00000439475 OR1L8Q8NGR8 309 aa8.07□□□□□ -1.12
MCF2L-216ENST00000439475 TERB2Q8NHR7 220 aa8.07□□□□□ -1.12
MCF2L-216ENST00000439475 MCFD2Q8NI22 146 aa8.07□□□□□ -1.12
MCF2L-216ENST00000439475 COPZ2Q9P299 210 aa8.07□□□□□ -1.12
MCF2L-216ENST00000439475 WI2-2373I1.2A0A1W2PRP0 233 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 FABP12A6NFH5 140 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 TEX22C9J3V5 150 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 K7EIL1 84 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 OR2J3O76001 311 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 LY86O95711 162 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 CD74P04233 296 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 SERPINE2P07093 398 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 TRAPPC2P0DI81 140 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 TRAPPC2BP0DI82 140 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 RPA2P15927 270 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 CTRB1P17538 263 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 PTBP1P26599 531 aaKnown RBP eCLIP8.06□□□□□ -1.12
MCF2L-216ENST00000439475 S100A5P33763 92 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 RND3P61587 244 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 SCGB2B2Q4G0G5 96 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 ZNF585BQ52M93 769 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 CTRB2Q6GPI1 263 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 H2BFWTQ7Z2G1 175 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 TMEM56Q96MV1 263 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 QTRT1Q9BXR0 403 aaKnown RBP8.06□□□□□ -1.12
MCF2L-216ENST00000439475 AKIP1Q9NQ31 210 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 PEMTQ9UBM1 199 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 FBXL7Q9UJT9 491 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 PRNDQ9UKY0 176 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 ZNF256Q9Y2P7 627 aaPredicted RBP8.06□□□□□ -1.12
MCF2L-216ENST00000439475 CEPT1Q9Y6K0 416 aa8.06□□□□□ -1.12
MCF2L-216ENST00000439475 TRAV3A0A0B4J244 114 aa8.05□□□□□ -1.12
MCF2L-216ENST00000439475 E7EUB6 86 aa8.05□□□□□ -1.12
MCF2L-216ENST00000439475 B3GALNT1O75752 331 aa8.05□□□□□ -1.12
MCF2L-216ENST00000439475 PRH1P02810 166 aa8.05□□□□□ -1.12
MCF2L-216ENST00000439475 AKAIN1P0CW23 69 aa8.05□□□□□ -1.12
MCF2L-216ENST00000439475 G6PCP35575 357 aa8.05□□□□□ -1.12
MCF2L-216ENST00000439475 PIGPP57054 158 aa8.05□□□□□ -1.12
MCF2L-216ENST00000439475 OR2B8PP59922 312 aa8.05□□□□□ -1.12
MCF2L-216ENST00000439475 EXOSC2Q13868 293 aaKnown RBP8.05□□□□□ -1.12
MCF2L-216ENST00000439475 C15orf32Q32M92 178 aa8.05□□□□□ -1.12
MCF2L-216ENST00000439475 LHFPL1Q86WI0 220 aa8.05□□□□□ -1.12
MCF2L-216ENST00000439475 OR1L6Q8NGR2 347 aa8.05□□□□□ -1.12
MCF2L-216ENST00000439475 OR4A16Q8NH70 328 aa8.05□□□□□ -1.12
MCF2L-216ENST00000439475 SMIM4Q8WVI0 70 aa8.05□□□□□ -1.12
MCF2L-216ENST00000439475 EEF1AKMT3Q96AZ1 226 aa8.05□□□□□ -1.12
MCF2L-216ENST00000439475 CXorf58Q96LI9 332 aa8.05□□□□□ -1.12
MCF2L-216ENST00000439475 SCGB3A2Q96PL1 93 aa8.05□□□□□ -1.12
MCF2L-216ENST00000439475 SLIRPQ9GZT3 109 aaKnown RBP8.05□□□□□ -1.12
MCF2L-216ENST00000439475 C14orf166Q9Y224 244 aaKnown RBP8.05□□□□□ -1.12
MCF2L-216ENST00000439475 OR51B2Q9Y5P1 312 aa8.05□□□□□ -1.12
MCF2L-216ENST00000439475 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.04□□□□□ -1.12
MCF2L-216ENST00000439475 TEX50A0A1B0GTY4 177 aa8.04□□□□□ -1.12
MCF2L-216ENST00000439475 GGCTO75223 188 aaKnown RBP8.04□□□□□ -1.12
MCF2L-216ENST00000439475 RBMXL2O75526 392 aaKnown RBP8.04□□□□□ -1.12
MCF2L-216ENST00000439475 CTSDP07339 412 aaPredicted RBP8.04□□□□□ -1.12
MCF2L-216ENST00000439475 AREGP15514 252 aa8.04□□□□□ -1.12
MCF2L-216ENST00000439475 TNFSF8P32971 234 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms