RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 HCFC1P51610 2035 aa13.53□□□□□ -0.24
CLCNKA-203ENST00000439316 TRGV8A0A0C4DH27 118 aa13.53□□□□□ -0.24
CLCNKA-203ENST00000439316 KIR2DS2P43631 304 aa13.53□□□□□ -0.24
CLCNKA-203ENST00000439316 CNN1P51911 297 aaKnown RBP13.53□□□□□ -0.24
CLCNKA-203ENST00000439316 FOXL1Q12952 345 aa13.53□□□□□ -0.24
CLCNKA-203ENST00000439316 PRSS8Q16651 343 aa13.53□□□□□ -0.24
CLCNKA-203ENST00000439316 C1orf174Q8IYL3 243 aa13.53□□□□□ -0.24
CLCNKA-203ENST00000439316 VKORC1L1Q8N0U8 176 aa13.53□□□□□ -0.24
CLCNKA-203ENST00000439316 TMEM18Q96B42 140 aa13.53□□□□□ -0.24
CLCNKA-203ENST00000439316 PLPPR2Q96GM1 343 aa13.53□□□□□ -0.24
CLCNKA-203ENST00000439316 CHODLQ9H9P2 273 aa13.53□□□□□ -0.24
CLCNKA-203ENST00000439316 TMEM140Q9NV12 185 aa13.53□□□□□ -0.24
CLCNKA-203ENST00000439316 AHRRA9YTQ3 701 aa13.52□□□□□ -0.24
CLCNKA-203ENST00000439316 CXorf1O96002 111 aa13.52□□□□□ -0.24
CLCNKA-203ENST00000439316 FAM87AP0C7U9 286 aa13.52□□□□□ -0.24
CLCNKA-203ENST00000439316 UCNP55089 124 aa13.52□□□□□ -0.24
CLCNKA-203ENST00000439316 MIC13Q5XKP0 118 aa13.52□□□□□ -0.24
CLCNKA-203ENST00000439316 OR2Z1Q8NG97 314 aa13.52□□□□□ -0.24
CLCNKA-203ENST00000439316 PPP1R35Q8TAP8 253 aa13.52□□□□□ -0.24
CLCNKA-203ENST00000439316 DDB2Q92466 427 aa13.52□□□□□ -0.24
CLCNKA-203ENST00000439316 NOL4LQ96MY1 436 aaPredicted RBP13.52□□□□□ -0.24
CLCNKA-203ENST00000439316 FAM234AQ9H0X4 552 aa13.52□□□□□ -0.24
CLCNKA-203ENST00000439316 PLSCR4Q9NRQ2 329 aa13.52□□□□□ -0.24
CLCNKA-203ENST00000439316 AURKAIP1Q9NWT8 199 aaPredicted RBP13.52□□□□□ -0.24
CLCNKA-203ENST00000439316 DUSP13Q9UII6 198 aa13.52□□□□□ -0.24
CLCNKA-203ENST00000439316 LSM4Q9Y4Z0 139 aaKnown RBP13.52□□□□□ -0.24
CLCNKA-203ENST00000439316 TRBV20OR9-2A0A075B6H5 130 aa13.52□□□□□ -0.25
CLCNKA-203ENST00000439316 TRAV3A0A0B4J244 114 aa13.52□□□□□ -0.25
CLCNKA-203ENST00000439316 CCKARP32238 428 aa13.52□□□□□ -0.25
CLCNKA-203ENST00000439316 CFHR2P36980 270 aa13.52□□□□□ -0.25
CLCNKA-203ENST00000439316 ZNF134P52741 427 aa13.52□□□□□ -0.25
CLCNKA-203ENST00000439316 ZNF664Q8N3J9 261 aa13.52□□□□□ -0.25
CLCNKA-203ENST00000439316 GBGT1Q8N5D6 347 aa13.52□□□□□ -0.25
CLCNKA-203ENST00000439316 C1orf159Q96HA4 380 aa13.52□□□□□ -0.25
CLCNKA-203ENST00000439316 SFRP2Q96HF1 295 aa13.52□□□□□ -0.25
CLCNKA-203ENST00000439316 S1PR3Q99500 378 aa13.52□□□□□ -0.25
CLCNKA-203ENST00000439316 TCF19Q9Y242 345 aa13.52□□□□□ -0.25
CLCNKA-203ENST00000439316 A0A0U1RQK1 487 aa13.51□□□□□ -0.25
CLCNKA-203ENST00000439316 ZNF320A2RRD8 509 aa13.51□□□□□ -0.25
CLCNKA-203ENST00000439316 PGPEP1LA6NFU8 196 aa13.51□□□□□ -0.25
CLCNKA-203ENST00000439316 A8MWP6 167 aa13.51□□□□□ -0.25
CLCNKA-203ENST00000439316 MSMPQ1L6U9 139 aa13.51□□□□□ -0.25
CLCNKA-203ENST00000439316 Q8NA96 180 aa13.51□□□□□ -0.25
CLCNKA-203ENST00000439316 TPRP12270 2363 aaKnown RBP13.51□□□□□ -0.25
CLCNKA-203ENST00000439316 ATRXP46100 2492 aa13.51□□□□□ -0.25
CLCNKA-203ENST00000439316 TET2Q6N021 2002 aaPredicted RBP13.51□□□□□ -0.25
CLCNKA-203ENST00000439316 MDFIC2A0A1B0GVS7 189 aa13.51□□□□□ -0.25
CLCNKA-203ENST00000439316 ABHD12Q8N2K0 398 aa13.51□□□□□ -0.25
CLCNKA-203ENST00000439316 GCSAMQ8N6F7 178 aa13.51□□□□□ -0.25
CLCNKA-203ENST00000439316 FAM169BQ8N8A8 192 aa13.51□□□□□ -0.25
CLCNKA-203ENST00000439316 ELOVL5Q9NYP7 299 aa13.51□□□□□ -0.25
CLCNKA-203ENST00000439316 TRAPPC1Q9Y5R8 145 aa13.51□□□□□ -0.25
CLCNKA-203ENST00000439316 SCO2A0A1W2PP80 73 aa13.5□□□□□ -0.25
CLCNKA-203ENST00000439316 C15orf61A6NNL5 157 aa13.5□□□□□ -0.25
CLCNKA-203ENST00000439316 ITGB1BP1O14713 200 aa13.5□□□□□ -0.25
CLCNKA-203ENST00000439316 OR4S2Q8NH73 311 aa13.5□□□□□ -0.25
CLCNKA-203ENST00000439316 SDSLQ96GA7 329 aa13.5□□□□□ -0.25
CLCNKA-203ENST00000439316 CALYQ9NYX4 217 aa13.5□□□□□ -0.25
CLCNKA-203ENST00000439316 PRR14LQ5THK1 2151 aa13.5□□□□□ -0.25
CLCNKA-203ENST00000439316 IGHV3OR15-7A0A075B7D8 119 aa13.49□□□□□ -0.25
CLCNKA-203ENST00000439316 SLC31A2O15432 143 aa13.49□□□□□ -0.25
CLCNKA-203ENST00000439316 TNFSF13O75888 250 aa13.49□□□□□ -0.25
CLCNKA-203ENST00000439316 IL6RP08887 468 aaPredicted RBP13.49□□□□□ -0.25
CLCNKA-203ENST00000439316 KRTCAP3Q53RY4 240 aa13.49□□□□□ -0.25
CLCNKA-203ENST00000439316 C1orf229Q6ZS94 237 aaPredicted RBP13.49□□□□□ -0.25
CLCNKA-203ENST00000439316 BHLHA15Q7RTS1 189 aaPredicted RBP13.49□□□□□ -0.25
CLCNKA-203ENST00000439316 SGMS2Q8NHU3 365 aa13.49□□□□□ -0.25
CLCNKA-203ENST00000439316 OPN3Q9H1Y3 402 aaPredicted RBP13.49□□□□□ -0.25
CLCNKA-203ENST00000439316 NPVFQ9HCQ7 196 aa13.49□□□□□ -0.25
CLCNKA-203ENST00000439316 YTHDF2Q9Y5A9 579 aaKnown RBP13.49□□□□□ -0.25
CLCNKA-203ENST00000439316 A0A1B0GV90 55 aa13.49□□□□□ -0.25
CLCNKA-203ENST00000439316 ZNF705GA8MUZ8 300 aaPredicted RBP13.49□□□□□ -0.25
CLCNKA-203ENST00000439316 CGAP01215 116 aa13.49□□□□□ -0.25
CLCNKA-203ENST00000439316 CGB3P0DN86 165 aa13.49□□□□□ -0.25
CLCNKA-203ENST00000439316 CGB7P0DN87 165 aa13.49□□□□□ -0.25
CLCNKA-203ENST00000439316 GCHFRP30047 84 aa13.49□□□□□ -0.25
CLCNKA-203ENST00000439316 RAB7AP51149 207 aa13.49□□□□□ -0.25
CLCNKA-203ENST00000439316 ARSJQ5FYB0 599 aaPredicted RBP13.49□□□□□ -0.25
CLCNKA-203ENST00000439316 LRP11Q86VZ4 500 aa13.49□□□□□ -0.25
CLCNKA-203ENST00000439316 PROCRQ9UNN8 238 aa13.49□□□□□ -0.25
CLCNKA-203ENST00000439316 SLC25A15Q9Y619 301 aa13.49□□□□□ -0.25
CLCNKA-203ENST00000439316 IGHV3-13P01766 116 aa13.48□□□□□ -0.25
CLCNKA-203ENST00000439316 IGHV3-7P01780 117 aa13.48□□□□□ -0.25
CLCNKA-203ENST00000439316 TIMP3P35625 211 aa13.48□□□□□ -0.25
CLCNKA-203ENST00000439316 SSTP61278 116 aa13.48□□□□□ -0.25
CLCNKA-203ENST00000439316 SSX2Q16385 188 aa13.48□□□□□ -0.25
CLCNKA-203ENST00000439316 TEX38Q6PEX7 206 aa13.48□□□□□ -0.25
CLCNKA-203ENST00000439316 SEM1Q6ZVN7 128 aa13.48□□□□□ -0.25
CLCNKA-203ENST00000439316 MRPL41Q8IXM3 137 aaKnown RBP13.48□□□□□ -0.25
CLCNKA-203ENST00000439316 ZNRF1Q8ND25 227 aa13.48□□□□□ -0.25
CLCNKA-203ENST00000439316 SSMEM1Q8WWF3 244 aa13.48□□□□□ -0.25
CLCNKA-203ENST00000439316 C11orf52Q96A22 123 aa13.48□□□□□ -0.25
CLCNKA-203ENST00000439316 STARD4Q96DR4 205 aa13.48□□□□□ -0.25
CLCNKA-203ENST00000439316 C2orf88Q9BSF0 95 aa13.48□□□□□ -0.25
CLCNKA-203ENST00000439316 NDUFAF3Q9BU61 184 aa13.48□□□□□ -0.25
CLCNKA-203ENST00000439316 NCOR1P1Q9H4R4 102 aa13.48□□□□□ -0.25
CLCNKA-203ENST00000439316 FOXA2Q9Y261 457 aaPredicted RBP13.48□□□□□ -0.25
CLCNKA-203ENST00000439316 PCNX1Q96RV3 2341 aa13.47□□□□□ -0.25
CLCNKA-203ENST00000439316 NPY1RP25929 384 aa13.47□□□□□ -0.25
CLCNKA-203ENST00000439316 YPEL3P61236 119 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms