RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 PHLDA2Q53GA4 152 aa19.04■□□□□ 0.64
RAPGEF1-206ENST00000438647 NECAP1Q8NC96 275 aa19.04■□□□□ 0.64
RAPGEF1-206ENST00000438647 COMMD5Q9GZQ3 224 aa19.04■□□□□ 0.64
RAPGEF1-206ENST00000438647 FAM212BQ9NTI7 297 aaPredicted RBP19.04■□□□□ 0.64
RAPGEF1-206ENST00000438647 PEF1Q9UBV8 284 aaKnown RBP19.04■□□□□ 0.64
RAPGEF1-206ENST00000438647 ANKRD34BA5PLL1 514 aa19.03■□□□□ 0.64
RAPGEF1-206ENST00000438647 MARCH11A6NNE9 402 aa19.03■□□□□ 0.64
RAPGEF1-206ENST00000438647 SAP30O75446 220 aa19.03■□□□□ 0.64
RAPGEF1-206ENST00000438647 CD3DP04234 171 aa19.03■□□□□ 0.64
RAPGEF1-206ENST00000438647 ECI1P42126 302 aa19.03■□□□□ 0.64
RAPGEF1-206ENST00000438647 TAS2R19P59542 299 aa19.03■□□□□ 0.64
RAPGEF1-206ENST00000438647 DEFA5Q01523 94 aa19.03■□□□□ 0.64
RAPGEF1-206ENST00000438647 DIRAS2Q96HU8 199 aa19.03■□□□□ 0.64
RAPGEF1-206ENST00000438647 C6orf62Q9GZU0 229 aaPredicted RBP19.03■□□□□ 0.64
RAPGEF1-206ENST00000438647 AKIP1Q9NQ31 210 aa19.03■□□□□ 0.64
RAPGEF1-206ENST00000438647 E7EUB6 86 aa19.02■□□□□ 0.64
RAPGEF1-206ENST00000438647 PRH1P02810 166 aa19.02■□□□□ 0.64
RAPGEF1-206ENST00000438647 LPAR6P43657 344 aa19.02■□□□□ 0.64
RAPGEF1-206ENST00000438647 ZNF45Q02386 682 aa19.02■□□□□ 0.64
RAPGEF1-206ENST00000438647 ATP5G2Q06055 141 aa19.02■□□□□ 0.64
RAPGEF1-206ENST00000438647 DEFB121Q5J5C9 76 aa19.02■□□□□ 0.64
RAPGEF1-206ENST00000438647 FAM209BQ5JX69 171 aa19.02■□□□□ 0.64
RAPGEF1-206ENST00000438647 ACSM6Q6P461 480 aa19.02■□□□□ 0.64
RAPGEF1-206ENST00000438647 CADM3Q8N126 398 aa19.02■□□□□ 0.64
RAPGEF1-206ENST00000438647 TMEM229BQ8NBD8 167 aa19.02■□□□□ 0.64
RAPGEF1-206ENST00000438647 CRYGCP07315 174 aa19.01■□□□□ 0.63
RAPGEF1-206ENST00000438647 PSMB6P28072 239 aa19.01■□□□□ 0.63
RAPGEF1-206ENST00000438647 TBC1D26Q86UD7 250 aa19.01■□□□□ 0.63
RAPGEF1-206ENST00000438647 ZNF486Q96H40 463 aaPredicted RBP19.01■□□□□ 0.63
RAPGEF1-206ENST00000438647 OR4C12Q96R67 309 aa19.01■□□□□ 0.63
RAPGEF1-206ENST00000438647 SRSF8Q9BRL6 282 aaKnown RBP19.01■□□□□ 0.63
RAPGEF1-206ENST00000438647 ELOVL1Q9BW60 279 aa19.01■□□□□ 0.63
RAPGEF1-206ENST00000438647 A0A1B0GW64 132 aa19■□□□□ 0.63
RAPGEF1-206ENST00000438647 RBMXL2O75526 392 aaKnown RBP19■□□□□ 0.63
RAPGEF1-206ENST00000438647 KRASP01116 189 aa19■□□□□ 0.63
RAPGEF1-206ENST00000438647 OR2B8PP59922 312 aa19■□□□□ 0.63
RAPGEF1-206ENST00000438647 EXOSC2Q13868 293 aaKnown RBP19■□□□□ 0.63
RAPGEF1-206ENST00000438647 IL18Q14116 193 aa19■□□□□ 0.63
RAPGEF1-206ENST00000438647 THOC7Q6I9Y2 204 aaKnown RBP19■□□□□ 0.63
RAPGEF1-206ENST00000438647 LHFPL1Q86WI0 220 aa19■□□□□ 0.63
RAPGEF1-206ENST00000438647 SMIM4Q8WVI0 70 aa19■□□□□ 0.63
RAPGEF1-206ENST00000438647 SLIRPQ9GZT3 109 aaKnown RBP19■□□□□ 0.63
RAPGEF1-206ENST00000438647 TRAV3A0A0B4J244 114 aa18.99■□□□□ 0.63
RAPGEF1-206ENST00000438647 CTDSPLO15194 276 aa18.99■□□□□ 0.63
RAPGEF1-206ENST00000438647 OR2J3O76001 311 aa18.99■□□□□ 0.63
RAPGEF1-206ENST00000438647 CD74P04233 296 aa18.99■□□□□ 0.63
RAPGEF1-206ENST00000438647 PGAM2P15259 253 aa18.99■□□□□ 0.63
RAPGEF1-206ENST00000438647 AREGP15514 252 aa18.99■□□□□ 0.63
RAPGEF1-206ENST00000438647 RPA2P15927 270 aa18.99■□□□□ 0.63
RAPGEF1-206ENST00000438647 CTRB1P17538 263 aa18.99■□□□□ 0.63
RAPGEF1-206ENST00000438647 TATDN3Q17R31 274 aa18.99■□□□□ 0.63
RAPGEF1-206ENST00000438647 C15orf32Q32M92 178 aa18.99■□□□□ 0.63
RAPGEF1-206ENST00000438647 ZNF585BQ52M93 769 aa18.99■□□□□ 0.63
RAPGEF1-206ENST00000438647 CTRB2Q6GPI1 263 aa18.99■□□□□ 0.63
RAPGEF1-206ENST00000438647 QTRT1Q9BXR0 403 aaKnown RBP18.99■□□□□ 0.63
RAPGEF1-206ENST00000438647 ZNF256Q9Y2P7 627 aaPredicted RBP18.99■□□□□ 0.63
RAPGEF1-206ENST00000438647 CCDC160A6NGH7 325 aa18.98■□□□□ 0.63
RAPGEF1-206ENST00000438647 SNAPC5O75971 98 aa18.98■□□□□ 0.63
RAPGEF1-206ENST00000438647 RAB3DO95716 219 aa18.98■□□□□ 0.63
RAPGEF1-206ENST00000438647 DEFA4P12838 97 aa18.98■□□□□ 0.63
RAPGEF1-206ENST00000438647 MYOD1P15172 320 aa18.98■□□□□ 0.63
RAPGEF1-206ENST00000438647 HIST1H1BP16401 226 aaKnown RBP18.98■□□□□ 0.63
RAPGEF1-206ENST00000438647 RPEL1Q2QD12 228 aa18.98■□□□□ 0.63
RAPGEF1-206ENST00000438647 STEAP1BQ6NZ63 245 aa18.98■□□□□ 0.63
RAPGEF1-206ENST00000438647 OR6Q1Q8NGQ2 317 aa18.98■□□□□ 0.63
RAPGEF1-206ENST00000438647 TSC22D3Q99576 134 aa18.98■□□□□ 0.63
RAPGEF1-206ENST00000438647 CEPT1Q9Y6K0 416 aa18.98■□□□□ 0.63
RAPGEF1-206ENST00000438647 G6PCP35575 357 aa18.97■□□□□ 0.63
RAPGEF1-206ENST00000438647 RND3P61587 244 aa18.97■□□□□ 0.63
RAPGEF1-206ENST00000438647 KLF5Q13887 457 aaPredicted RBP18.97■□□□□ 0.63
RAPGEF1-206ENST00000438647 MEF2DQ14814 521 aa18.97■□□□□ 0.63
RAPGEF1-206ENST00000438647 HSD17B13Q7Z5P4 300 aaPredicted RBP18.97■□□□□ 0.63
RAPGEF1-206ENST00000438647 OR1L8Q8NGR8 309 aa18.97■□□□□ 0.63
RAPGEF1-206ENST00000438647 TERB2Q8NHR7 220 aa18.97■□□□□ 0.63
RAPGEF1-206ENST00000438647 MCFD2Q8NI22 146 aa18.97■□□□□ 0.63
RAPGEF1-206ENST00000438647 FBXL7Q9UJT9 491 aa18.97■□□□□ 0.63
RAPGEF1-206ENST00000438647 CGB1A6NKQ9 187 aa18.96■□□□□ 0.63
RAPGEF1-206ENST00000438647 TRBV12-3P01733 135 aa18.96■□□□□ 0.63
RAPGEF1-206ENST00000438647 PTBP1P26599 531 aaKnown RBP eCLIP18.96■□□□□ 0.633e-7■■■■■ 35.6
RAPGEF1-206ENST00000438647 OR4D10Q8NGI6 311 aa18.96■□□□□ 0.63
RAPGEF1-206ENST00000438647 ZFAND1Q8TCF1 268 aa18.96■□□□□ 0.63
RAPGEF1-206ENST00000438647 FANCD2OSQ96PS1 177 aa18.96■□□□□ 0.63
RAPGEF1-206ENST00000438647 PRR25Q96S07 402 aa18.96■□□□□ 0.63
RAPGEF1-206ENST00000438647 FKBP11Q9NYL4 201 aa18.96■□□□□ 0.63
RAPGEF1-206ENST00000438647 RSL24D1Q9UHA3 163 aaKnown RBP18.96■□□□□ 0.63
RAPGEF1-206ENST00000438647 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.95■□□□□ 0.62
RAPGEF1-206ENST00000438647 IGLC7A0M8Q6 106 aa18.95■□□□□ 0.62
RAPGEF1-206ENST00000438647 CYB5BO43169 146 aa18.95■□□□□ 0.62
RAPGEF1-206ENST00000438647 LY86O95711 162 aa18.95■□□□□ 0.62
RAPGEF1-206ENST00000438647 REG1AP05451 166 aa18.95■□□□□ 0.62
RAPGEF1-206ENST00000438647 SERPINE2P07093 398 aa18.95■□□□□ 0.62
RAPGEF1-206ENST00000438647 TRAPPC2P0DI81 140 aa18.95■□□□□ 0.62
RAPGEF1-206ENST00000438647 TRAPPC2BP0DI82 140 aa18.95■□□□□ 0.62
RAPGEF1-206ENST00000438647 PIGPP57054 158 aa18.95■□□□□ 0.62
RAPGEF1-206ENST00000438647 SYNJ2BPP57105 145 aa18.95■□□□□ 0.62
RAPGEF1-206ENST00000438647 KLK9Q2XQG4 91 aa18.95■□□□□ 0.62
RAPGEF1-206ENST00000438647 SCGB2B2Q4G0G5 96 aa18.95■□□□□ 0.62
RAPGEF1-206ENST00000438647 OR9G4Q8NGQ1 327 aa18.95■□□□□ 0.62
RAPGEF1-206ENST00000438647 NXF2Q9GZY0 626 aaKnown RBP18.95■□□□□ 0.62
RAPGEF1-206ENST00000438647 KLK9Q9UKQ9 250 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms