RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 C1QL4Q86Z23 238 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 LYG1Q8N1E2 194 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 OR51G1Q8NGK1 321 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 WFIKKN1Q96NZ8 548 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 HSPB7Q9UBY9 170 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 POLQO75417 2590 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 TET2Q6N021 2002 aaPredicted RBP7.81□□□□□ -1.16
CUX1-206ENST00000437600 ARHGAP32A7KAX9 2087 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 TMPRSS2O15393 492 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 SOD3P08294 240 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 NUTF2P61970 127 aaKnown RBP7.81□□□□□ -1.16
CUX1-206ENST00000437600 EIF4EBP1Q13541 118 aaPredicted RBP7.81□□□□□ -1.16
CUX1-206ENST00000437600 LBHQ53QV2 105 aaPredicted RBP7.81□□□□□ -1.16
CUX1-206ENST00000437600 KHDC3LQ587J8 217 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 FFAR4Q5NUL3 377 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 PRAMEF5Q5TYX0 476 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 FAM90A2PQ658T7 463 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 SP5Q6BEB4 398 aaPredicted RBP7.81□□□□□ -1.16
CUX1-206ENST00000437600 TMEM14EPQ6UXP3 125 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 OR10G4Q8NGN3 311 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 OR10G9Q8NGN4 311 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 OR10G7Q8NGN6 311 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 LINC01560Q8TB33 94 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 CLUHP3Q96NS8 147 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 UNKLQ9H9P5 680 aaKnown RBP7.81□□□□□ -1.16
CUX1-206ENST00000437600 GCM1Q9NP62 436 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 ZNF835Q9Y2P0 537 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 DYSFO75923 2080 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 TMEM8BA6NDV4 472 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 SEC14L6B5MCN3 397 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 SNRPCP09234 159 aaKnown RBP7.81□□□□□ -1.16
CUX1-206ENST00000437600 REG1BP48304 166 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 LOXL3P58215 753 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 MSMO1Q15800 293 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 CT45A1Q5HYN5 189 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 ZNF506Q5JVG8 444 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 WDR25Q64LD2 544 aaPredicted RBP7.81□□□□□ -1.16
CUX1-206ENST00000437600 TMEM108Q6UXF1 575 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 MRGPRGQ86SM5 289 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 CT45A3Q8NHU0 189 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 HEYLQ9NQ87 328 aaPredicted RBP7.81□□□□□ -1.16
CUX1-206ENST00000437600 GCN1Q92616 2671 aaKnown RBP7.8□□□□□ -1.16
CUX1-206ENST00000437600 NAV3Q8IVL0 2385 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 LOC102723971A0A1B0GUV8 181 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 PMS2P5A8MQ11 134 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 RNF212BA8MTL3 300 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 TRGC2P03986 189 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 OR4A8P0C604 315 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 BCL2P10415 239 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 SLC25A6P12236 298 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 HNF1AP20823 631 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 TNFAIP6P98066 277 aaPredicted RBP7.8□□□□□ -1.16
CUX1-206ENST00000437600 RBPJQ06330 500 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 ELOBQ15370 118 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 MLANAQ16655 118 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 MOB3BQ86TA1 216 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 SSMEM1Q8WWF3 244 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 RAB24Q969Q5 203 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 TVP23CQ96ET8 276 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 DOPEY1Q5JWR5 2465 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 PGPEP1LA6NFU8 196 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 HIST1H2BKO60814 126 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 PAGE4O60829 102 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 IGHV1-46P01743 117 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 HIST1H2BJP06899 126 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 GNLYP22749 145 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 HIST1H2BOP23527 126 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 HIST1H2BBP33778 126 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 HIST1H2BDP58876 126 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 HIST1H2BCP62807 126 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 ADIRFQ15847 76 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 HIST2H2BEQ16778 126 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.8□□□□□ -1.16
CUX1-206ENST00000437600 CCL17Q92583 94 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 HIST1H2BHQ93079 126 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 HIST1H2BNQ99877 126 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 HIST1H2BMQ99879 126 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 ABCA12Q86UK0 2595 aa7.8□□□□□ -1.16
CUX1-206ENST00000437600 PHOX2AO14813 284 aa7.79□□□□□ -1.16
CUX1-206ENST00000437600 IGHV3-48P01763 117 aa7.79□□□□□ -1.16
CUX1-206ENST00000437600 GZMHP20718 246 aa7.79□□□□□ -1.16
CUX1-206ENST00000437600 SELENOVP59797 346 aa7.79□□□□□ -1.16
CUX1-206ENST00000437600 CD81P60033 236 aa7.79□□□□□ -1.16
CUX1-206ENST00000437600 HIST3H2BBQ8N257 126 aa7.79□□□□□ -1.16
CUX1-206ENST00000437600 SLC24A4Q8NFF2 622 aa7.79□□□□□ -1.16
CUX1-206ENST00000437600 OR4F5Q8NH21 305 aa7.79□□□□□ -1.16
CUX1-206ENST00000437600 OR4A16Q8NH70 328 aa7.79□□□□□ -1.16
CUX1-206ENST00000437600 OR4F4Q96R69 305 aa7.79□□□□□ -1.16
CUX1-206ENST00000437600 CALYQ9NYX4 217 aa7.79□□□□□ -1.16
CUX1-206ENST00000437600 C15orf62A8K5M9 175 aa7.79□□□□□ -1.16
CUX1-206ENST00000437600 IFNL4K9M1U5 179 aa7.79□□□□□ -1.16
CUX1-206ENST00000437600 PLAUP00749 431 aa7.79□□□□□ -1.16
CUX1-206ENST00000437600 IGKV1-16P04430 117 aa7.79□□□□□ -1.16
CUX1-206ENST00000437600 HSPB1P04792 205 aaKnown RBP7.79□□□□□ -1.16
CUX1-206ENST00000437600 P0C879 139 aa7.79□□□□□ -1.16
CUX1-206ENST00000437600 TUBG1P23258 451 aa7.79□□□□□ -1.16
CUX1-206ENST00000437600 ATG101Q9BSB4 218 aa7.79□□□□□ -1.16
CUX1-206ENST00000437600 NPCDR1Q9BY65 106 aa7.79□□□□□ -1.16
CUX1-206ENST00000437600 RNF24Q9Y225 148 aa7.79□□□□□ -1.16
CUX1-206ENST00000437600 FASNP49327 2511 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms