RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 OR5L1Q8NGL2 311 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 KCTD4Q8WVF5 259 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 RBPMSQ93062 196 aaKnown RBP1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 UBE2WQ96B02 151 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 LLPHQ9BRT6 129 aaKnown RBP1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 TSSK6Q9BXA6 273 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 ALX4Q9H161 411 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 FBXL15Q9H469 300 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 IMP3Q9NV31 184 aaKnown RBP1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 ICOSQ9Y6W8 199 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 VPS13CQ709C8 3753 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 DENND4CQ5VZ89 1909 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 MYO7BQ6PIF6 2116 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 ZGRF1Q86YA3 2104 aa1.54□□□□□ -2.16
HMGB1P27-201ENST00000431429 NBEAL2Q6ZNJ1 2754 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 A0A1B0GU33 70 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 A0A1B0GX78 115 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 A0A1W2PNN7 141 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 FABP12A6NFH5 140 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 OR5H14A6NHG9 310 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 K7ERS5 55 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 M0QYV0 167 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 CITO14578 2027 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 ITGB1BP1O14713 200 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 CETN3O15182 167 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 CUBNO60494 3623 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 PLXNA2O75051 1894 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 RAB36O95755 333 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 ORM1P02763 201 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 P0C880 135 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 RD3LP0DJH9 198 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 CTLA4P16410 223 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 AKR1C4P17516 323 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 OPRM1P35372 400 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 HSPA9P38646 679 aaKnown RBP1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 MP68P56378 58 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 AP1S1P61966 158 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 ACTG1P63261 375 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 SKP2Q13309 424 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 CLEC12BQ2HXU8 276 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 SCIMPQ6UWF3 145 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 PP632Q6XCG6 107 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 CYHR1Q6ZMK1 362 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 OLIG3Q7RTU3 272 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 TAC4Q86UU9 113 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 C10orf107Q8IVU9 208 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 ZNF664Q8N3J9 261 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 TEX29Q8N6K0 151 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 LFNGQ8NES3 379 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 BPIFB6Q8NFQ5 453 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 DSCAML1Q8TD84 2053 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 DTD1Q8TEA8 209 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 APOBEC3DQ96AK3 386 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 PPWD1Q96BP3 646 aaKnown RBP1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 TM2D3Q9BRN9 247 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 SLC19A3Q9BZV2 496 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 CHST5Q9GZS9 411 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 ANAPC1Q9H1A4 1944 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 MED29Q9NX70 200 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 COMMD9Q9P000 198 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 OR5V1Q9UGF6 321 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 NAGKQ9UJ70 344 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 LINC00588Q9Y4M8 146 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 TRAPPC1Q9Y5R8 145 aa1.53□□□□□ -2.16
HMGB1P27-201ENST00000431429 MEGF8Q7Z7M0 2845 aa1.53□□□□□ -2.17
HMGB1P27-201ENST00000431429 ZNF407Q9C0G0 2248 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 OBSL1O75147 1896 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 IGKV1-12A0A0C4DH73 117 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 PVALEFA0A1B0GWK0 134 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 EFCAB9A8MZ26 197 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 C2orf74A8MZ97 194 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 H3BQV1 296 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 YEATS4O95619 227 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 IGKV1D-12P01611 117 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 ZNF7P17097 686 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 SRP14P37108 136 aaKnown RBP1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 EMP2P54851 167 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 KLF3P57682 345 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 UBE2G2P60604 165 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 BIKQ13323 160 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 EXOC3L4Q17RC7 722 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 C4orf26Q17RF5 130 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 C6orf52Q5T4I8 152 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 SPOPLQ6IQ16 392 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 LYPD6Q86Y78 171 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 DEFB106AQ8N104 65 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 OR4E2Q8NGC2 313 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 OR52E4Q8NGH9 312 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 OR4P4Q8NGL7 312 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 OR9I1Q8NGQ6 314 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 OR11L1Q8NGX0 322 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 ZNF418Q8TF45 676 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 LCN9Q8WX39 176 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 PSMF1Q92530 271 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 COX14Q96I36 57 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 GNB1LQ9BYB4 327 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 GABARAPL1Q9H0R8 117 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 UBQLN4Q9NRR5 601 aa1.52□□□□□ -2.17
HMGB1P27-201ENST00000431429 C14orf105Q9NVL8 296 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms