RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 TNFSF10P50591 281 aa11.13□□□□□ -0.63
SPG11-202ENST00000427534 TMEM170BQ5T4T1 132 aa11.13□□□□□ -0.63
SPG11-202ENST00000427534 GTF3AQ92664 365 aaKnown RBP11.13□□□□□ -0.63
SPG11-202ENST00000427534 A0A0U1RRA0 63 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 LINC00862A6NCI5 91 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 B4DEV8 164 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 TMEM54Q969K7 222 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 TNFRSF9Q07011 255 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 TFF3Q07654 80 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 LAIR2Q6ISS4 152 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 BIVMQ86UB2 503 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 TP53RKQ96S44 253 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 SRSF4Q08170 494 aaKnown RBP11.12□□□□□ -0.63
SPG11-202ENST00000427534 ATG101Q9BSB4 218 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 TMEM222Q9H0R3 208 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 TNFRSF18Q9Y5U5 241 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.12□□□□□ -0.63
SPG11-202ENST00000427534 CHAC2Q8WUX2 184 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 WDYHV1Q96HA8 205 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 G6PC2Q9NQR9 355 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 PLXNA1Q9UIW2 1896 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 ZNF585BQ52M93 769 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 TMEM252Q8N6L7 170 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 OR4D5Q8NGN0 318 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 PARLQ9H300 379 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 TCF19Q9Y242 345 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 APC2O95996 2303 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 IGFBP2P18065 325 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 MALP21145 153 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 ZFP30Q9Y2G7 519 aa11.12□□□□□ -0.63
SPG11-202ENST00000427534 IGHV3-64A0A075B6Q5 118 aa11.11□□□□□ -0.63
SPG11-202ENST00000427534 SIAH2O43255 324 aa11.11□□□□□ -0.63
SPG11-202ENST00000427534 IGHV3-53P01767 116 aa11.11□□□□□ -0.63
SPG11-202ENST00000427534 GPR132Q9UNW8 380 aa11.11□□□□□ -0.63
SPG11-202ENST00000427534 CXCL2P19875 107 aa11.11□□□□□ -0.63
SPG11-202ENST00000427534 P2RY4P51582 365 aa11.11□□□□□ -0.63
SPG11-202ENST00000427534 FOXA3P55318 350 aaPredicted RBP11.11□□□□□ -0.63
SPG11-202ENST00000427534 FBLN7Q53RD9 439 aa11.11□□□□□ -0.63
SPG11-202ENST00000427534 TIMM23BQ5SRD1 257 aa11.11□□□□□ -0.63
SPG11-202ENST00000427534 ASPHD2Q6ICH7 369 aa11.11□□□□□ -0.63
SPG11-202ENST00000427534 MAP1LC3AQ9H492 121 aa11.11□□□□□ -0.63
SPG11-202ENST00000427534 NDUFA2O43678 99 aa11.11□□□□□ -0.63
SPG11-202ENST00000427534 MUC1P15941 1255 aaPredicted RBP11.11□□□□□ -0.63
SPG11-202ENST00000427534 LINC01590Q5TEZ4 76 aa11.11□□□□□ -0.63
SPG11-202ENST00000427534 AQP3Q92482 292 aa11.11□□□□□ -0.63
SPG11-202ENST00000427534 TMEM101Q96IK0 257 aa11.11□□□□□ -0.63
SPG11-202ENST00000427534 C17orf98A8MV24 154 aa11.11□□□□□ -0.63
SPG11-202ENST00000427534 HSPE1P61604 102 aaKnown RBP11.11□□□□□ -0.63
SPG11-202ENST00000427534 LINC00470Q9BZP3 86 aa11.11□□□□□ -0.63
SPG11-202ENST00000427534 GNG5P63218 68 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 TAF15Q92804 592 aaKnown RBP eCLIP11.1□□□□□ -0.63
SPG11-202ENST00000427534 VWCEQ96DN2 955 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 SOX21Q9Y651 276 aaPredicted RBP11.1□□□□□ -0.63
SPG11-202ENST00000427534 PSG7Q13046 419 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 C8orf46Q8TAG6 207 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 NABP2Q9BQ15 211 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 PGPEP1Q9NXJ5 209 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 NUTF2P61970 127 aaKnown RBP11.1□□□□□ -0.63
SPG11-202ENST00000427534 SPATA45Q537H7 98 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 MRPL18Q9H0U6 180 aaKnown RBP11.1□□□□□ -0.63
SPG11-202ENST00000427534 A0A087X0M5 115 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 A0A1B0GX30 115 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 TMEM186Q96B77 213 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 TRAF4Q9BUZ4 470 aaPredicted RBP11.1□□□□□ -0.63
SPG11-202ENST00000427534 DEPPQ9NTK1 212 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 FAM90A10PA6NDY2 464 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 FAM90A18PA6NE21 464 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 FAM90A16PA6NEW6 464 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 FAM90A20PA6NIJ5 464 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 FAM90A8PA6NJQ4 464 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 FAM90A7PA6NKC0 464 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 FAM90A22PA8MWA6 464 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 FAM90A12PA8MX19 464 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 FAM90A5PA8MXJ8 464 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 FAM90A23PA8MXZ1 464 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 FAM90A15PP0C7V4 464 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 FAM90A13PP0C7W8 464 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 FAM90A14PP0C7W9 464 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 FAM90A24PP0C7X0 464 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 NPC2P61916 151 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 SPSB4Q96A44 273 aa11.1□□□□□ -0.63
SPG11-202ENST00000427534 ZNF729A6NN14 1252 aaPredicted RBP11.09□□□□□ -0.63
SPG11-202ENST00000427534 NDUFA3O95167 84 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 CGAP01215 116 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 TRGC2P03986 189 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 C1QTNF12Q5T7M4 302 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 SFTA2Q6UW10 78 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 TEX29Q8N6K0 151 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 ST6GALNAC6Q969X2 333 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 TAF1LQ8IZX4 1826 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 IGHMP01871 453 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 TSPOP30536 169 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 IL17RELQ6ZVW7 336 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 GTSCR1Q86UQ5 136 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 SBF2Q86WG5 1849 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 A8MWL6 223 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 BCL2P10415 239 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 EFNB1P98172 346 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 UNQ6494/PRO21346Q6UXR6 183 aa11.09□□□□□ -0.63
SPG11-202ENST00000427534 JKAMPQ9P055 326 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms