RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 TGIF2LXQ8IUE1 241 aa11.87□□□□□ -0.51
ERCC3-202ENST00000426778 GCSAMQ8N6F7 178 aa11.87□□□□□ -0.51
ERCC3-202ENST00000426778 FAM216AQ8WUB2 273 aa11.87□□□□□ -0.51
ERCC3-202ENST00000426778 TMEM18Q96B42 140 aa11.87□□□□□ -0.51
ERCC3-202ENST00000426778 OR2V2Q96R30 315 aa11.87□□□□□ -0.51
ERCC3-202ENST00000426778 TCF19Q9Y242 345 aa11.87□□□□□ -0.51
ERCC3-202ENST00000426778 ZZEF1O43149 2961 aa11.86□□□□□ -0.51
ERCC3-202ENST00000426778 MDFIC2A0A1B0GVS7 189 aa11.86□□□□□ -0.51
ERCC3-202ENST00000426778 RPL15P61313 204 aaKnown RBP11.86□□□□□ -0.51
ERCC3-202ENST00000426778 RPL31P62899 125 aaKnown RBP11.86□□□□□ -0.51
ERCC3-202ENST00000426778 RELBQ01201 579 aa11.86□□□□□ -0.51
ERCC3-202ENST00000426778 TDRG1Q3Y452 100 aa11.86□□□□□ -0.51
ERCC3-202ENST00000426778 LURAP1Q96LR2 239 aa11.86□□□□□ -0.51
ERCC3-202ENST00000426778 S1PR3Q99500 378 aa11.86□□□□□ -0.51
ERCC3-202ENST00000426778 HPRT1P00492 218 aa11.86□□□□□ -0.51
ERCC3-202ENST00000426778 IGFBP2P18065 325 aa11.86□□□□□ -0.51
ERCC3-202ENST00000426778 KITLGP21583 273 aa11.86□□□□□ -0.51
ERCC3-202ENST00000426778 TIMP3P35625 211 aa11.86□□□□□ -0.51
ERCC3-202ENST00000426778 PRR31Q5SQ13 230 aa11.86□□□□□ -0.51
ERCC3-202ENST00000426778 OR4P4Q8NGL7 312 aa11.86□□□□□ -0.51
ERCC3-202ENST00000426778 IFI27L2Q9H2X8 130 aa11.86□□□□□ -0.51
ERCC3-202ENST00000426778 K7EN84 100 aa11.85□□□□□ -0.51
ERCC3-202ENST00000426778 M0R1B8 84 aa11.85□□□□□ -0.51
ERCC3-202ENST00000426778 CGAP01215 116 aa11.85□□□□□ -0.51
ERCC3-202ENST00000426778 SRP14P37108 136 aaKnown RBP11.85□□□□□ -0.51
ERCC3-202ENST00000426778 VDAC2P45880 294 aaPredicted RBP11.85□□□□□ -0.51
ERCC3-202ENST00000426778 ERVK-16P61578 105 aa11.85□□□□□ -0.51
ERCC3-202ENST00000426778 CISD2Q8N5K1 135 aaKnown RBP11.85□□□□□ -0.51
ERCC3-202ENST00000426778 DCAF16Q9NXF7 216 aa11.85□□□□□ -0.51
ERCC3-202ENST00000426778 NBASA2RRP1 2371 aa11.85□□□□□ -0.51
ERCC3-202ENST00000426778 ZNF705FA8MVS1 300 aaPredicted RBP11.85□□□□□ -0.51
ERCC3-202ENST00000426778 PDE6DO43924 150 aa11.85□□□□□ -0.51
ERCC3-202ENST00000426778 IL6RP08887 468 aaPredicted RBP11.85□□□□□ -0.51
ERCC3-202ENST00000426778 ZNF705DP0CH99 300 aaPredicted RBP11.85□□□□□ -0.51
ERCC3-202ENST00000426778 ZNF705BP0CI00 300 aaPredicted RBP11.85□□□□□ -0.51
ERCC3-202ENST00000426778 LOXL3P58215 753 aa11.85□□□□□ -0.51
ERCC3-202ENST00000426778 LYG1Q8N1E2 194 aa11.85□□□□□ -0.51
ERCC3-202ENST00000426778 GBGT1Q8N5D6 347 aa11.85□□□□□ -0.51
ERCC3-202ENST00000426778 STPG3Q8N7X2 389 aa11.85□□□□□ -0.51
ERCC3-202ENST00000426778 ELOVL5Q9NYP7 299 aa11.85□□□□□ -0.51
ERCC3-202ENST00000426778 VENTXO95231 258 aa11.84□□□□□ -0.51
ERCC3-202ENST00000426778 SPCS3P61009 180 aa11.84□□□□□ -0.51
ERCC3-202ENST00000426778 ZNF90Q03938 601 aa11.84□□□□□ -0.51
ERCC3-202ENST00000426778 RNASEH2CQ8TDP1 164 aaKnown RBP11.84□□□□□ -0.51
ERCC3-202ENST00000426778 ACY3Q96HD9 319 aa11.84□□□□□ -0.51
ERCC3-202ENST00000426778 MMP23AO75900 390 aa11.84□□□□□ -0.51
ERCC3-202ENST00000426778 IGHV3-48P01763 117 aa11.84□□□□□ -0.51
ERCC3-202ENST00000426778 OR10J4P0C629 311 aa11.84□□□□□ -0.51
ERCC3-202ENST00000426778 TCL1AP56279 114 aa11.84□□□□□ -0.51
ERCC3-202ENST00000426778 EFNB3Q15768 340 aa11.84□□□□□ -0.51
ERCC3-202ENST00000426778 COA6Q5JTJ3 125 aaKnown RBP11.84□□□□□ -0.51
ERCC3-202ENST00000426778 MIR17HGQ75NE6 70 aa11.84□□□□□ -0.51
ERCC3-202ENST00000426778 LRFN3Q9BTN0 628 aa11.84□□□□□ -0.51
ERCC3-202ENST00000426778 KCNIP2Q9NS61 270 aa11.84□□□□□ -0.51
ERCC3-202ENST00000426778 SAA2-SAA4A0A096LPE2 208 aa11.83□□□□□ -0.51
ERCC3-202ENST00000426778 J3QW42 95 aa11.83□□□□□ -0.51
ERCC3-202ENST00000426778 CA2P00918 260 aa11.83□□□□□ -0.51
ERCC3-202ENST00000426778 ADH4P08319 380 aa11.83□□□□□ -0.51
ERCC3-202ENST00000426778 STAG3L2P0CL84 134 aa11.83□□□□□ -0.51
ERCC3-202ENST00000426778 STAG3L3P0CL85 134 aa11.83□□□□□ -0.51
ERCC3-202ENST00000426778 SAA2P0DJI9 122 aaPredicted RBP11.83□□□□□ -0.51
ERCC3-202ENST00000426778 FXYD3Q14802 87 aa11.83□□□□□ -0.51
ERCC3-202ENST00000426778 CT45A1Q5HYN5 189 aa11.83□□□□□ -0.51
ERCC3-202ENST00000426778 CT45A3Q8NHU0 189 aa11.83□□□□□ -0.51
ERCC3-202ENST00000426778 PRR7Q8TB68 274 aa11.83□□□□□ -0.51
ERCC3-202ENST00000426778 RND1Q92730 232 aa11.83□□□□□ -0.51
ERCC3-202ENST00000426778 FKBP11Q9NYL4 201 aa11.83□□□□□ -0.51
ERCC3-202ENST00000426778 ZGRF1Q86YA3 2104 aa11.83□□□□□ -0.52
ERCC3-202ENST00000426778 DSCAML1Q8TD84 2053 aa11.83□□□□□ -0.52
ERCC3-202ENST00000426778 PRSS46E5RG02 174 aa11.83□□□□□ -0.52
ERCC3-202ENST00000426778 ZNF883P0CG24 379 aa11.83□□□□□ -0.52
ERCC3-202ENST00000426778 G0S2P27469 103 aa11.83□□□□□ -0.52
ERCC3-202ENST00000426778 OR4A47Q6IF82 309 aa11.83□□□□□ -0.52
ERCC3-202ENST00000426778 TMEM144Q7Z5S9 345 aa11.83□□□□□ -0.52
ERCC3-202ENST00000426778 ITLN1Q8WWA0 313 aa11.83□□□□□ -0.52
ERCC3-202ENST00000426778 CALYQ9NYX4 217 aa11.83□□□□□ -0.52
ERCC3-202ENST00000426778 IER3P46695 156 aa11.83□□□□□ -0.52
ERCC3-202ENST00000426778 PDLIM4P50479 330 aa11.83□□□□□ -0.52
ERCC3-202ENST00000426778 KIAA1644Q3SXP7 199 aa11.83□□□□□ -0.52
ERCC3-202ENST00000426778 FAM90A1Q86YD7 464 aa11.83□□□□□ -0.52
ERCC3-202ENST00000426778 DOLPP1Q86YN1 238 aa11.83□□□□□ -0.52
ERCC3-202ENST00000426778 NHLRC2Q8NBF2 726 aa11.83□□□□□ -0.52
ERCC3-202ENST00000426778 OR10G8Q8NGN5 311 aa11.83□□□□□ -0.52
ERCC3-202ENST00000426778 MS4A10Q96PG2 267 aa11.83□□□□□ -0.52
ERCC3-202ENST00000426778 DCHS2Q6V1P9 2916 aa11.82□□□□□ -0.52
ERCC3-202ENST00000426778 GCHFRP30047 84 aa11.82□□□□□ -0.52
ERCC3-202ENST00000426778 OPRK1P41145 380 aa11.82□□□□□ -0.52
ERCC3-202ENST00000426778 HTD2P86397 168 aa11.82□□□□□ -0.52
ERCC3-202ENST00000426778 ZCCHC24Q8N2G6 241 aaKnown RBP11.82□□□□□ -0.52
ERCC3-202ENST00000426778 DIRC2Q96SL1 478 aa11.82□□□□□ -0.52
ERCC3-202ENST00000426778 POLR3KQ9Y2Y1 108 aaPredicted RBP11.82□□□□□ -0.52
ERCC3-202ENST00000426778 PTPRZ1P23471 2315 aaPredicted RBP11.82□□□□□ -0.52
ERCC3-202ENST00000426778 ASH1LQ9NR48 2969 aaKnown RBP11.82□□□□□ -0.52
ERCC3-202ENST00000426778 SRRM5B3KS81 715 aa11.82□□□□□ -0.52
ERCC3-202ENST00000426778 IGKV1-16P04430 117 aa11.82□□□□□ -0.52
ERCC3-202ENST00000426778 TYMSP04818 313 aa11.82□□□□□ -0.52
ERCC3-202ENST00000426778 KRTCAP3Q53RY4 240 aa11.82□□□□□ -0.52
ERCC3-202ENST00000426778 FAM103A1Q9BTL3 118 aaKnown RBP11.82□□□□□ -0.52
ERCC3-202ENST00000426778 NDUFAF3Q9BU61 184 aa11.82□□□□□ -0.52
ERCC3-202ENST00000426778 TP53TG3Q9ULZ0 132 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms