RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 BMPR1BO00238 502 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 XKRYO14609 159 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 SLC2A10O95528 541 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 IGLV2-11P01706 119 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 IGHG2P01859 326 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 OR5AL1P0C617 328 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 CD58P19256 250 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 KLK2P20151 261 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 DRD3P35462 400 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 OPRK1P41145 380 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 VDAC2P45880 294 aaPredicted RBP2.29□□□□□ -2.04
PMS1-209ENST00000424059 MARCKSL1P49006 195 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 HERVK_113P63121 156 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 CX3CL1P78423 397 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 LOXL1Q08397 574 aaPredicted RBP2.29□□□□□ -2.04
PMS1-209ENST00000424059 FOXF1Q12946 379 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 CD226Q15762 336 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 Q499Y3 187 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 SPATA45Q537H7 98 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 FAM201AQ5SY85 155 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 LCN15Q6UWW0 184 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 TMEM64Q6YI46 380 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 SHISA6Q6ZSJ9 500 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 TMEM150AQ86TG1 271 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 TGIF2LYQ8IUE0 185 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 SGPP2Q8IWX5 399 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 MMD2Q8IY49 270 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 PIANPQ8IYJ0 282 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 CIARTQ8N365 385 aaPredicted RBP2.29□□□□□ -2.04
PMS1-209ENST00000424059 METTL27Q8N6F8 245 aaPredicted RBP2.29□□□□□ -2.04
PMS1-209ENST00000424059 Q8N976 141 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 OR1L3Q8NH93 324 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 SSC4DQ8WTU2 575 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 RTN4IP1Q8WWV3 396 aaPredicted RBP2.29□□□□□ -2.04
PMS1-209ENST00000424059 MS4A6EQ96DS6 147 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 DPH3Q96FX2 82 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 FMC1Q96HJ9 113 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 PBOV1Q9GZY1 135 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 WDR13Q9H1Z4 485 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 IL25Q9H293 177 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 RERGLQ9H628 205 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 ST20Q9HBF5 79 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 COMMD9Q9P000 198 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 ASF1AQ9Y294 204 aa2.29□□□□□ -2.04
PMS1-209ENST00000424059 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.28□□□□□ -2.04
PMS1-209ENST00000424059 STRCQ7RTU9 1775 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 TSPOAP1O95153 1857 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 TNS2Q63HR2 1409 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 LOXHD1Q8IVV2 1947 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 ARHGEF28Q8N1W1 1705 aaKnown RBP2.28□□□□□ -2.04
PMS1-209ENST00000424059 SHANK3Q9BYB0 1731 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 TRAV26-2A0A0B4J265 109 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 MUC21A0A0G2JKD1 596 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 FAM240AA0A1B0GVK7 77 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 TMEM202A6NGA9 273 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 OR4C45A6NMZ5 311 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 SHISA9B4DS77 424 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 M0R1X1 148 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 ZFAND5O76080 213 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 CA2P00918 260 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 IGKV1D-16P01601 117 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 IL5P05113 134 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 LIFP15018 202 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 PFN2P35080 140 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 POLR2JP52435 117 aaKnown RBP2.28□□□□□ -2.04
PMS1-209ENST00000424059 APOC4P55056 127 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 FOXA3P55318 350 aaPredicted RBP2.28□□□□□ -2.04
PMS1-209ENST00000424059 FBXW4P57775 412 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 PNOCQ13519 176 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 TECRLQ5HYJ1 363 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 TTC32Q5I0X7 151 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 CEACAM19Q7Z692 300 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 C10orf111Q8N326 155 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 ZNF709Q8N972 641 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 ATP6V0E2Q8NHE4 81 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 VSTM2AQ8TAG5 236 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 CT55Q8WUE5 264 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 KLK6Q92876 244 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 POP5Q969H6 163 aaKnown RBP2.28□□□□□ -2.04
PMS1-209ENST00000424059 ELSPBP1Q96BH3 223 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 PYGO2Q9BRQ0 406 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 EMC6Q9BV81 110 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 SCRT1Q9BWW7 348 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 GNB1LQ9BYB4 327 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 TMEM191AQ9H0A3 160 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 PDFQ9HBH1 243 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 SDR39U1Q9NRG7 319 aaPredicted RBP2.28□□□□□ -2.04
PMS1-209ENST00000424059 NDUFB11Q9NX14 153 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 C21orf62Q9NYP8 219 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 OR5V1Q9UGF6 321 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 IL36AQ9UHA7 158 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 AK3Q9UIJ7 227 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 MPC1Q9Y5U8 109 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 MYO18AQ92614 2054 aaKnown RBP2.28□□□□□ -2.04
PMS1-209ENST00000424059 MAST1Q9Y2H9 1570 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 FER1L6Q2WGJ9 1857 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 BAZ2AQ9UIF9 1905 aaKnown RBP2.28□□□□□ -2.04
PMS1-209ENST00000424059 TET3O43151 1660 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 IQGAP1P46940 1657 aa2.28□□□□□ -2.04
PMS1-209ENST00000424059 TECPR2O15040 1411 aa2.28□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms