RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 TMEM140Q9NV12 185 aa13.81□□□□□ -0.2
UBXN11-208ENST00000421827 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.8□□□□□ -0.2
UBXN11-208ENST00000421827 CGB1A6NKQ9 187 aa13.8□□□□□ -0.2
UBXN11-208ENST00000421827 DHFRP00374 187 aa13.8□□□□□ -0.2
UBXN11-208ENST00000421827 IGLV1-51P01701 117 aa13.8□□□□□ -0.2
UBXN11-208ENST00000421827 GP9P14770 177 aa13.8□□□□□ -0.2
UBXN11-208ENST00000421827 LPAR6P43657 344 aa13.8□□□□□ -0.2
UBXN11-208ENST00000421827 OR2B8PP59922 312 aa13.8□□□□□ -0.2
UBXN11-208ENST00000421827 ERVK-16P61578 105 aa13.8□□□□□ -0.2
UBXN11-208ENST00000421827 VAX1Q5SQQ9 334 aa13.8□□□□□ -0.2
UBXN11-208ENST00000421827 LPCAT3Q6P1A2 487 aa13.8□□□□□ -0.2
UBXN11-208ENST00000421827 DGCR14Q96DF8 476 aaKnown RBP13.8□□□□□ -0.2
UBXN11-208ENST00000421827 COMMD5Q9GZQ3 224 aa13.8□□□□□ -0.2
UBXN11-208ENST00000421827 EXTL2Q9UBQ6 330 aa13.8□□□□□ -0.2
UBXN11-208ENST00000421827 FBXL7Q9UJT9 491 aa13.8□□□□□ -0.2
UBXN11-208ENST00000421827 SMAD5-AS1Q9Y6J3 95 aa13.8□□□□□ -0.2
UBXN11-208ENST00000421827 MARCH11A6NNE9 402 aa13.79□□□□□ -0.2
UBXN11-208ENST00000421827 BMPR1BO00238 502 aa13.79□□□□□ -0.2
UBXN11-208ENST00000421827 TPPPO94811 219 aa13.79□□□□□ -0.2
UBXN11-208ENST00000421827 FGF2P09038 288 aa13.79□□□□□ -0.2
UBXN11-208ENST00000421827 RPA2P15927 270 aa13.79□□□□□ -0.2
UBXN11-208ENST00000421827 CTRB1P17538 263 aa13.79□□□□□ -0.2
UBXN11-208ENST00000421827 KLK9Q2XQG4 91 aa13.79□□□□□ -0.2
UBXN11-208ENST00000421827 RNASE12Q5GAN4 147 aaKnown RBP13.79□□□□□ -0.2
UBXN11-208ENST00000421827 FAM209BQ5JX69 171 aa13.79□□□□□ -0.2
UBXN11-208ENST00000421827 CTRB2Q6GPI1 263 aa13.79□□□□□ -0.2
UBXN11-208ENST00000421827 IL34Q6ZMJ4 242 aa13.79□□□□□ -0.2
UBXN11-208ENST00000421827 HAPLN4Q86UW8 402 aa13.79□□□□□ -0.2
UBXN11-208ENST00000421827 FANCD2OSQ96PS1 177 aa13.79□□□□□ -0.2
UBXN11-208ENST00000421827 KLK9Q9UKQ9 250 aa13.79□□□□□ -0.2
UBXN11-208ENST00000421827 M0QYG6 137 aa13.78□□□□□ -0.2
UBXN11-208ENST00000421827 REG1AP05451 166 aa13.78□□□□□ -0.2
UBXN11-208ENST00000421827 NHLRC4P0CG21 123 aaPredicted RBP13.78□□□□□ -0.2
UBXN11-208ENST00000421827 HIST1H1BP16401 226 aaKnown RBP13.78□□□□□ -0.2
UBXN11-208ENST00000421827 S100GP29377 79 aa13.78□□□□□ -0.2
UBXN11-208ENST00000421827 SPCS2Q15005 226 aa13.78□□□□□ -0.2
UBXN11-208ENST00000421827 PHLDA2Q53GA4 152 aa13.78□□□□□ -0.2
UBXN11-208ENST00000421827 CLVS1Q8IUQ0 354 aaPredicted RBP13.78□□□□□ -0.2
UBXN11-208ENST00000421827 FCAMRQ8WWV6 532 aa13.78□□□□□ -0.2
UBXN11-208ENST00000421827 KLK11Q9UBX7 282 aa13.78□□□□□ -0.2
UBXN11-208ENST00000421827 NDUFB8O95169 186 aa13.77□□□□□ -0.21
UBXN11-208ENST00000421827 KRASP01116 189 aa13.77□□□□□ -0.21
UBXN11-208ENST00000421827 CSN3P07498 182 aa13.77□□□□□ -0.21
UBXN11-208ENST00000421827 DEFA4P12838 97 aa13.77□□□□□ -0.21
UBXN11-208ENST00000421827 UCP3P55916 312 aa13.77□□□□□ -0.21
UBXN11-208ENST00000421827 ZNF585BQ52M93 769 aa13.77□□□□□ -0.21
UBXN11-208ENST00000421827 SLC38A6Q8IZM9 456 aa13.77□□□□□ -0.21
UBXN11-208ENST00000421827 OR52I2Q8NH67 350 aa13.77□□□□□ -0.21
UBXN11-208ENST00000421827 C15orf40Q8WUR7 153 aa13.77□□□□□ -0.21
UBXN11-208ENST00000421827 ABHD1Q96SE0 405 aa13.77□□□□□ -0.21
UBXN11-208ENST00000421827 SRSF8Q9BRL6 282 aaKnown RBP13.77□□□□□ -0.21
UBXN11-208ENST00000421827 QTRT1Q9BXR0 403 aaKnown RBP13.77□□□□□ -0.21
UBXN11-208ENST00000421827 MIXL1Q9H2W2 232 aa13.77□□□□□ -0.21
UBXN11-208ENST00000421827 SIGLEC8Q9NYZ4 499 aa13.77□□□□□ -0.21
UBXN11-208ENST00000421827 MTFP1Q9UDX5 166 aa13.77□□□□□ -0.21
UBXN11-208ENST00000421827 IGLC7A0M8Q6 106 aa13.76□□□□□ -0.21
UBXN11-208ENST00000421827 PPP5D1E7EU14 171 aa13.76□□□□□ -0.21
UBXN11-208ENST00000421827 RGS5O15539 181 aa13.76□□□□□ -0.21
UBXN11-208ENST00000421827 IFNA6P05013 189 aa13.76□□□□□ -0.21
UBXN11-208ENST00000421827 RNASE10Q5GAN6 216 aaKnown RBP13.76□□□□□ -0.21
UBXN11-208ENST00000421827 TBC1D26Q86UD7 250 aa13.76□□□□□ -0.21
UBXN11-208ENST00000421827 CADM3Q8N126 398 aa13.76□□□□□ -0.21
UBXN11-208ENST00000421827 RAB2BQ8WUD1 216 aa13.76□□□□□ -0.21
UBXN11-208ENST00000421827 FAM212BQ9NTI7 297 aaPredicted RBP13.76□□□□□ -0.21
UBXN11-208ENST00000421827 PEMTQ9UBM1 199 aa13.76□□□□□ -0.21
UBXN11-208ENST00000421827 DMRT1Q9Y5R6 373 aa13.76□□□□□ -0.21
UBXN11-208ENST00000421827 IGLV11-55A0A075B6I3 123 aa13.75□□□□□ -0.21
UBXN11-208ENST00000421827 TEX50A0A1B0GTY4 177 aa13.75□□□□□ -0.21
UBXN11-208ENST00000421827 CD3DP04234 171 aa13.75□□□□□ -0.21
UBXN11-208ENST00000421827 TRAPPC2P0DI81 140 aa13.75□□□□□ -0.21
UBXN11-208ENST00000421827 TRAPPC2BP0DI82 140 aa13.75□□□□□ -0.21
UBXN11-208ENST00000421827 TBPP20226 339 aa13.75□□□□□ -0.21
UBXN11-208ENST00000421827 G6PCP35575 357 aa13.75□□□□□ -0.21
UBXN11-208ENST00000421827 THOC7Q6I9Y2 204 aaKnown RBP13.75□□□□□ -0.21
UBXN11-208ENST00000421827 OR1L8Q8NGR8 309 aa13.75□□□□□ -0.21
UBXN11-208ENST00000421827 EEF1AKMT3Q96AZ1 226 aa13.75□□□□□ -0.21
UBXN11-208ENST00000421827 CCDC140Q96MF4 163 aa13.75□□□□□ -0.21
UBXN11-208ENST00000421827 ASCL2Q99929 193 aa13.75□□□□□ -0.21
UBXN11-208ENST00000421827 BCL7BQ9BQE9 202 aa13.75□□□□□ -0.21
UBXN11-208ENST00000421827 H0Y980 276 aa13.74□□□□□ -0.21
UBXN11-208ENST00000421827 CTDSP2O14595 271 aa13.74□□□□□ -0.21
UBXN11-208ENST00000421827 GGCTO75223 188 aaKnown RBP13.74□□□□□ -0.21
UBXN11-208ENST00000421827 SNAPC5O75971 98 aa13.74□□□□□ -0.21
UBXN11-208ENST00000421827 IGHV3-23P01764 117 aa13.74□□□□□ -0.21
UBXN11-208ENST00000421827 TMBIM6P55061 237 aa13.74□□□□□ -0.21
UBXN11-208ENST00000421827 HSD17B13Q7Z5P4 300 aaPredicted RBP13.74□□□□□ -0.21
UBXN11-208ENST00000421827 LAX1Q8IWV1 398 aa13.74□□□□□ -0.21
UBXN11-208ENST00000421827 ARRDC1Q8N5I2 433 aa13.74□□□□□ -0.21
UBXN11-208ENST00000421827 OR10W1Q8NGF6 305 aa13.74□□□□□ -0.21
UBXN11-208ENST00000421827 NSG2Q9Y328 171 aa13.74□□□□□ -0.21
UBXN11-208ENST00000421827 S4R3C0 116 aa13.74□□□□□ -0.21
UBXN11-208ENST00000421827 OR2C1O95371 312 aa13.73□□□□□ -0.21
UBXN11-208ENST00000421827 HLA-AP01891 365 aaKnown RBP13.73□□□□□ -0.21
UBXN11-208ENST00000421827 PGAM2P15259 253 aa13.73□□□□□ -0.21
UBXN11-208ENST00000421827 ARL3P36405 182 aa13.73□□□□□ -0.21
UBXN11-208ENST00000421827 RPL5P46777 297 aaKnown RBP13.73□□□□□ -0.21
UBXN11-208ENST00000421827 CLEC19AQ6UXS0 136 aa13.73□□□□□ -0.21
UBXN11-208ENST00000421827 LHFPL1Q86WI0 220 aa13.73□□□□□ -0.21
UBXN11-208ENST00000421827 DYNC2LI1Q8TCX1 351 aa13.73□□□□□ -0.21
UBXN11-208ENST00000421827 CXorf58Q96LI9 332 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms